mRNA_E-fasciculatus_F_contig15653.3922.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15653.3922.1 vs. uniprot
Match: A0A6H5JR57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR57_9PHAE) HSP 1 Score: 281 bits (719), Expect = 1.220e-80 Identity = 142/180 (78.89%), Postives = 153/180 (85.00%), Query Frame = 2
Query: 2 GHSRCLDALIVALNQAYDSGAGDGDDVRWFASTLDLQLASVDLCRACRRVPTVLVKIDDDTPRSLWNPVVYGEAEADSVASSRVPPLRVYGVMWEIEATFPNHVGLAEEPRGVYEEPRPSGGAPASDPPDSRGRVLSTSTRKLVMPTSGGSPTCNPLDAPVREICWPSSLRRVELGSNYD 541
G+SR LDAL VALNQAYDS AGDGD++RWF STL+LQLASVDLCRACR VPT+LVKID DTPRSLW P VY A A S S RVPPLR +GV WEIEATF HVGLAEEPR V EEPRPSGGAPASDP DSR RVLSTSTR+LV+PTS SP+C+PLDAPVREICW +SLRRVELGS YD
Sbjct: 13 GYSRFLDALTVALNQAYDSRAGDGDNIRWFTSTLNLQLASVDLCRACRSVPTLLVKIDHDTPRSLWTPTVY--AGAYSAPSGRVPPLRAHGVRWEIEATFAKHVGLAEEPREVCEEPRPSGGAPASDPQDSRSRVLSTSTRQLVVPTSSDSPSCDPLDAPVREICWSTSLRRVELGSYYD 190
BLAST of mRNA_E-fasciculatus_F_contig15653.3922.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 1.000e-16 Identity = 64/187 (34.22%), Postives = 93/187 (49.73%), Query Frame = 2
Query: 2 GHSRCLDALIVALNQAYDSGAGDGDDVRWFASTLDLQLASVDLCRACRRVPTVLVKIDDDTPRSLWNP----VVYGEAEADSVASSRVPPLRVYGVMWEIEATFPNHVGLAE-EPRGVYEEPRPSGGAPASDPPDSRGRV--LSTSTRKLVMPTSGGSPTCNPLDAPVREICWPSSLRRVELGSNYD 541
G S CL A IVALNQ + G + RW+ASTL+LQL S++ C ACRRVPT+ V++D TPRSLW+P + ++ S+RVP ++ G+ W ++ E R Y R SG + + S G + L ++LV + D P WP+SL ++ G +D
Sbjct: 13 GRSECLRAFIVALNQTCN-----GQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYR--RVSGNSSTA----SLGSMFWLQMMLKRLVFDS----------DMPASTASWPASLPQLLFGDRFD 178
BLAST of mRNA_E-fasciculatus_F_contig15653.3922.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 3.040e-15 Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 2
Query: 8 SRCLDALIVALNQAYDSGAGDGDDVRWFASTLDLQLASVDLCRACRRVPTVLVKIDDDTPRSLWNP 205
S+CLDA +VALNQ D G + RW+ASTL+LQL S++ C ACR VPT+ V++D TPRSLW+P
Sbjct: 39 SKCLDAFVVALNQTCD-----GQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSP 99
BLAST of mRNA_E-fasciculatus_F_contig15653.3922.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 5.430e-14 Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = 2
Query: 2 GHSRCLDALIVALNQAYDSGAGDGDDVRWFASTLDLQLASVDLCRACRRVPTVLVKIDDDTPRSLWNP----VVYGEAEADSVASSRVPPLRVYGVMWEI 289
G+S+CLDA +VALNQA D G + RW+ STL+LQL S+++C ACRRV T+ V++ TP SLW P SSRVP ++ +G+ W +
Sbjct: 5 GNSKCLDAFVVALNQACD-----GQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWAL 99
BLAST of mRNA_E-fasciculatus_F_contig15653.3922.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 3.660e-13 Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 2
Query: 11 RCLDALIVALNQAYDSGAGDGDDVRWFASTLDLQLASVDLCRACRRVPTVLVKIDDDTPRSLWNPVVYGEAEADSVASSRVPPLRVYGVMW 283
RCLDA +VAL+Q Y+ G + RW+ STL LQLAS++ C ACR P + V +D +TP +LW+ G+A + S+RVP ++ G+ W
Sbjct: 8 RCLDAFVVALSQCYEGG-----EKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWS---LGQANPTAGTSTRVPAVQAVGLTW 90
BLAST of mRNA_E-fasciculatus_F_contig15653.3922.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 1.480e-12 Identity = 63/186 (33.87%), Postives = 88/186 (47.31%), Query Frame = 2
Query: 2 GHSRCLDALIVALNQAYDSGAGDGDDVRWFASTLDLQLASVDLCRACRRVPTVLVKIDDDTPRSLWNPV----VYGEAEADSVASSRVPPLRVYGVMWEI--EATFPNHVGLAEEPRGVYEEPRPSGGAPASDPPDSRGRVLSTSTRKLVMPTSGGSPTCNPLDAPVREICWPSSLRRVELGSNYD 541
G S CLDA IVAL QA GDG RW+ STL+LQL S++ C ACR + V+I TP SLW+P + ++ SRVP ++ G MW + E P A E V E +P+G + A+ P GR+ +M S S V + WP+ L+ + G ++
Sbjct: 25 GRSECLDAFIVALKQA-----GDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRS---ATELHQVSENRQPTGPSSATSP----GRMGWFQKLTRLMFYSERS---------VNSVSWPACLQELSFGDFFN 189
BLAST of mRNA_E-fasciculatus_F_contig15653.3922.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 1.730e-12 Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = 2
Query: 2 GHSRCLDALIVALNQAYDSGAGDGDDVRWFASTLDLQLASVDLCRACRRVPTVLVKIDDDTPRSLWNP 205
G SR DALI+A++QAY+ G RW+ STL+L+LAS++ CRACRRVPT+ V++D +TP SLW+P
Sbjct: 5 GASRGFDALIIAISQAYE-----GRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSP 67
BLAST of mRNA_E-fasciculatus_F_contig15653.3922.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 2.900e-12 Identity = 43/99 (43.43%), Postives = 62/99 (62.63%), Query Frame = 2
Query: 8 SRCLDALIVALNQAYDSGAGDGDDVRWFASTLDLQLASVDLCRACRRVPTVLVKIDDDTPRSLWNPVVYGEAEADSVA-----SSRVPPLRVYGVMWEI 289
+RCLDA ++AL+QA + G + RW+ASTL+LQL S+DLCRACR + V +DD TPRSLW+ + ++ + SSRVP +R + W +
Sbjct: 9 TRCLDAFVIALSQACEGG-----EKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRT-AQTRPNTRSWNLHISSRVPVVRALRLTWAL 101
BLAST of mRNA_E-fasciculatus_F_contig15653.3922.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 3.420e-12 Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 2
Query: 2 GHSRCLDALIVALNQAYDSGAGDGDDVRWFASTLDLQLASVDLCRACRRVPTVLVKIDDDTPRSLWNPVVYGEAEADSVAS-----SRVPPLRVYGVMW 283
G++R DA +AL+QA + G + RW+ ST +LQL S+D+CRACR PT+ V++ TP SLW+P +A ++ +S SRVP +R + W
Sbjct: 5 GYTRSFDAFAIALSQACEGG-----EKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTV-QALPNTQSSKVRVVSRVPVVRALRLTW 97
BLAST of mRNA_E-fasciculatus_F_contig15653.3922.1 vs. uniprot
Match: D7G3G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G0_ECTSI) HSP 1 Score: 72.0 bits (175), Expect = 5.460e-12 Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 2
Query: 2 GHSRCLDALIVALNQAYDSGAGDGDDVRWFASTLDLQLASVDLCRACRRVPTVLVKIDDDTPR 190
G +CLDA IVALNQ D G + RW+ASTL+LQL S+ C ACRR PT+ V++D TPR
Sbjct: 5 GRRKCLDAFIVALNQTCD-----GRENRWYASTLELQLVSLKFCGACRRFPTLHVRVDRQTPR 62 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15653.3922.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15653.3922.1 >prot_E-fasciculatus_F_contig15653.3922.1 ID=prot_E-fasciculatus_F_contig15653.3922.1|Name=mRNA_E-fasciculatus_F_contig15653.3922.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=526bp MWEIEATFPNHVGLAEEPRGVYEEPRPSGGAPASDPPDSRGRVLSTSTRKback to top mRNA from alignment at E-fasciculatus_F_contig15653:467..2950+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15653.3922.1 ID=mRNA_E-fasciculatus_F_contig15653.3922.1|Name=mRNA_E-fasciculatus_F_contig15653.3922.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2484bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15653:467..2950+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15653:467..2950+ >mRNA_E-fasciculatus_F_contig15653.3922.1 ID=mRNA_E-fasciculatus_F_contig15653.3922.1|Name=mRNA_E-fasciculatus_F_contig15653.3922.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3156bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15653:467..2950+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |