prot_E-fasciculatus_F_contig15591.3886.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15591.3886.1
Unique Nameprot_E-fasciculatus_F_contig15591.3886.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length430
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15591.3886.1 vs. uniprot
Match: D8LLY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY3_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 1.330e-37
Identity = 234/491 (47.66%), Postives = 246/491 (50.10%), Query Frame = 0 
Query:    2 QAGGSGRELDVEVFGKRVRFERTGGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------GRGKSGRRAPTSPRNFTVRGXXXXXXXXXXXPPTKMSDRRLGPSRDAGEADDGEWAAGFETVSAKETE--------------------------------------------------SDCESAMGGSGAA--KVEWEAGFRESRTAPGAEDSEDGEWPAGFEAVSEXXXXXXXXXXXXXXXXSAEAEWEAGFQESRTEEEVEDXXXXGEKAARFGSVSQEAESDCESAMGSGGAASAEVEWEDGFREEPQLHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRREEQGAEDGDDDEWAAGFEPVSAEEPARDTKADRGFGITRV 429
            QAGGSGRELDVEVFGKRVRFERTGGSP         X             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                 XXXXXXXXXXXXXXXXXX           GRGK G R P S RNF VRGXXXXXXXXX  PPTK+  RR   SRDAG ADDGEWAAGFETVSA+ETE                                                  SDCESAMGG GAA  +VEWE GFRESRT  GAEDS+DGEW AGFEAVSE                SAE EWE GF+ESRTE+    XXXX        + ++EAESDCESAMGSG         + GFRE                                                  R EQGAE G      AGFEPVS E   R+T ADRG   T +
Sbjct:  686 QAGGSGRELDVEVFGKRVRFERTGGSPPSPRPGSSPXPSMATAEPDPWSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGHEGGHDDSRGGRGPAVLGSDDPENASISSAXXXXXXXXXXXXXXXXXXXXXXGLDSSAAGRGKPGLRNPASRRNFNVRGXXXXXXXXXE-PPTKIPGRRTRSSRDAGGADDGEWAAGFETVSAEETEADPENGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAAGFEAVSEEAESDCESAMGGGGAASAEVEWEDGFRESRTEQGAEDSDDGEWAAGFEAVSEEAESDCESAMGGGGAASAEVEWEDGFRESRTEQXXXXXXXXXXXXXXELASAKEAESDCESAMGSGXXXXXXXXXKAGFRES-------------------------------------------------RREQGAEXGX---XXAGFEPVS-EVTGRNTAADRGSAPTEI 1122
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15591.3886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLY3_ECTSI1.330e-3747.66Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15591contigE-fasciculatus_F_contig15591:88..1377 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15591.3886.1mRNA_E-fasciculatus_F_contig15591.3886.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15591 88..1377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15591.3886.1 ID=prot_E-fasciculatus_F_contig15591.3886.1|Name=mRNA_E-fasciculatus_F_contig15591.3886.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=430bp
RQAGGSGRELDVEVFGKRVRFERTGGSPPPPRPGSSRPPSMATAEAADTW
SDDDDGGGGGGGVDDDDSGLGDVSAAATHGSSSSWSSEEDDGDDGYGQGE
GHDDDGGGSNRGGAVVGSDDPDSSSSSSSNDDEERRLESSAAGRGKSGRR
APTSPRNFTVRGGGGGGDGGGGKPPTKMSDRRLGPSRDAGEADDGEWAAG
FETVSAKETESDCESAMGGSGAAKVEWEAGFRESRTAPGAEDSEDGEWPA
GFEAVSEEAESDCEGAVGGGGAASAEAEWEAGFQESRTEEEVEDDDDDGE
KAARFGSVSQEAESDCESAMGSGGAASAEVEWEDGFREEPQLHREDGEWA
AGFEVVSEECESDCESALGGGGAESAKVEWEDGFRESRREEQGAEDGDDD
EWAAGFEPVSAEEPARDTKADRGFGITRV*
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