mRNA_E-fasciculatus_F_contig1555.3863.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1555.3863.1 vs. uniprot
Match: D8LMY2_ECTSI (CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMY2_ECTSI) HSP 1 Score: 174 bits (442), Expect = 1.930e-53 Identity = 88/96 (91.67%), Postives = 90/96 (93.75%), Query Frame = 1
Query: 10 NNGRHLWRRLPASAKAAGGETAALWEVGKCLWKRDMSGAQAALRGREWSAPLAPYVALIETRVRERQLTVISKAFTVLPLESVAGMLACSVEDAEK 297
NN RHLWRRLPA+AKAAGGETAALWEVGK LWKRDMS AQAALR REWSAPLAPYVALIETRVRERQL +I KAFTVLPLESVAGMLACSVEDAEK
Sbjct: 65 NNARHLWRRLPAAAKAAGGETAALWEVGKSLWKRDMSFAQAALRDREWSAPLAPYVALIETRVRERQLAIIPKAFTVLPLESVAGMLACSVEDAEK 160
BLAST of mRNA_E-fasciculatus_F_contig1555.3863.1 vs. uniprot
Match: A0A836CG25_9STRA (CSN8_PSD8_EIF3K domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG25_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 6.360e-18 Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 13 NGRHLWRRLPASAKAAGGETAALWEVGKCLWKRDMSGAQAALRGREWSAPLAPYVALIETRVRERQLTVISKAFTVLPLESVAGMLACSVEDA 291
N RHLWRRL + KAA GETA LWEVGK W+RD + A AA+ R+WSA + VA + + R QL I +A+ +PL V ML SV++A
Sbjct: 63 NARHLWRRLHPTLKAADGETALLWEVGKAFWRRDTAAAYAAMN-RQWSADVGGLVAALAEKTRGAQLRQIGRAYRAVPLARVCAML--SVDEA 152
BLAST of mRNA_E-fasciculatus_F_contig1555.3863.1 vs. uniprot
Match: A0A7S2FNN9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FNN9_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 8.830e-17 Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 10 NNGRHLWRRLPASAKAAGGETAALWEVGKCLWKRDMSGAQAALRGREWSAPLAPYVALIETRVRERQLTVISKAFTVLPLESVAGML 270
+N RHLWRR+ KA G E A WEVGK LWKR++S A AAL+ R WSA LAP + VRE + ++ KA+T + + + A L
Sbjct: 55 DNARHLWRRIDEGIKAGGSELEATWEVGKLLWKREISAAYAALQ-RTWSAELAPLATALLEAVREHEFALLGKAYTNVGVSTAAAAL 140
BLAST of mRNA_E-fasciculatus_F_contig1555.3863.1 vs. uniprot
Match: A0A146M5C6_LYGHE (COP9 signalosome complex subunit 8 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A146M5C6_LYGHE) HSP 1 Score: 77.4 bits (189), Expect = 1.110e-15 Identity = 36/93 (38.71%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 13 NGRHLWRRLPASAKAAGGETAALWEVGKCLWKRDMSGAQAALRGREWSAPLAPYVALIETRVRERQLTVISKAFTVLPLESVAGMLACSVEDA 291
N + LW+R+P S KA E +W VGK +W RD G AL +WS +AP +A + +VRER L ++S+A+T + L++++ +L S +A
Sbjct: 36 NAKFLWKRIPPSVKAQNAEIGNIWAVGKAMWLRDAPGIYTALNSTQWSDDVAPIMAALVDKVRERCLGLVSQAYTSVTLDTLSKLLGVSPSEA 128
BLAST of mRNA_E-fasciculatus_F_contig1555.3863.1 vs. uniprot
Match: A0A0A9W9W4_LYGHE (COP9 signalosome complex subunit 8 n=2 Tax=Mirini TaxID=236659 RepID=A0A0A9W9W4_LYGHE) HSP 1 Score: 77.4 bits (189), Expect = 1.340e-15 Identity = 36/93 (38.71%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 13 NGRHLWRRLPASAKAAGGETAALWEVGKCLWKRDMSGAQAALRGREWSAPLAPYVALIETRVRERQLTVISKAFTVLPLESVAGMLACSVEDA 291
N + LW+R+P S KA E +W VGK +W RD G AL +WS +AP +A + +VRER L ++S+A+T + L++++ +L S +A
Sbjct: 45 NAKFLWKRIPPSVKAQNAEIGNIWAVGKAMWLRDAPGIYTALNSTQWSDDVAPIMAALVDKVRERCLGLVSQAYTSVTLDTLSKLLGVSPSEA 137
BLAST of mRNA_E-fasciculatus_F_contig1555.3863.1 vs. uniprot
Match: UPI0008400336 (COP9 signalosome complex subunit 8 n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI0008400336) HSP 1 Score: 73.2 bits (178), Expect = 6.120e-14 Identity = 36/95 (37.89%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 13 NGRHLWRRLPASAKAAGGETAALWEVGKCLWKRDMSGAQAALRGREWSAPLAPYVALIETRVRERQLTVISKAFTVLPLESVAGMLACSVEDAEK 297
N ++LW+R+P K + E A +W VG+ +W+RD AL EWS +A +A ++ VRER +T+ISKA++ L L A M ++E+A +
Sbjct: 45 NAKYLWKRIPCDLKGSSSELAQIWVVGQRMWQRDWPAVHVALN-TEWSEDVADIMAALKDNVRERAITLISKAYSSLDLIVFASMTGLTLEEARR 138
BLAST of mRNA_E-fasciculatus_F_contig1555.3863.1 vs. uniprot
Match: A0A7M7R2M8_APIME (COP9 signalosome complex subunit 8 n=11 Tax=Apinae TaxID=70987 RepID=A0A7M7R2M8_APIME) HSP 1 Score: 71.6 bits (174), Expect = 2.400e-13 Identity = 34/95 (35.79%), Postives = 56/95 (58.95%), Query Frame = 1
Query: 13 NGRHLWRRLPASAKAAGGETAALWEVGKCLWKRDMSGAQAALRGREWSAPLAPYVALIETRVRERQLTVISKAFTVLPLESVAGMLACSVEDAEK 297
N ++LW+R+P K+ E +W VG+ +W+RD AL EWS ++ +A ++ VRER +T+ISKA++ L L A M ++E+A +
Sbjct: 45 NAKYLWKRIPTDLKSGNAELGQIWMVGQRMWQRDWPAVHVALNA-EWSEDVSDIMAALKDNVRERAITLISKAYSSLSLTVFASMTGLTLEEARR 138
BLAST of mRNA_E-fasciculatus_F_contig1555.3863.1 vs. uniprot
Match: A0A0L7R6L8_9HYME (COP9 signalosome complex subunit 8 n=1 Tax=Habropoda laboriosa TaxID=597456 RepID=A0A0L7R6L8_9HYME) HSP 1 Score: 70.1 bits (170), Expect = 9.200e-13 Identity = 34/93 (36.56%), Postives = 55/93 (59.14%), Query Frame = 1
Query: 13 NGRHLWRRLPASAKAAGGETAALWEVGKCLWKRDMSGAQAALRGREWSAPLAPYVALIETRVRERQLTVISKAFTVLPLESVAGMLACSVEDA 291
N ++LW+R+PA K+ E +W VG+ +W+RD AL EWS ++ +A ++ VRER +++ISKA++ L L A M +E+A
Sbjct: 45 NAKYLWKRIPADLKSGSAELGQIWVVGQRMWQRDWPAVHVALN-EEWSEDVSDIMAALKDNVRERAISLISKAYSSLKLTVFASMTGLPLEEA 136
BLAST of mRNA_E-fasciculatus_F_contig1555.3863.1 vs. uniprot
Match: UPI001C202F05 (COP9 signalosome complex subunit 8 n=1 Tax=Aricia agestis TaxID=91739 RepID=UPI001C202F05) HSP 1 Score: 69.3 bits (168), Expect = 1.780e-12 Identity = 28/81 (34.57%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 25 LWRRLPASAKAAGGETAALWEVGKCLWKRDMSGAQAALRGREWSAPLAPYVALIETRVRERQLTVISKAFTVLPLESVAGM 267
LW+R+P + + E AA+W +G+ LWK+D G AL+G W+ P+AP + +E +VR +I ++++ + L++V M
Sbjct: 48 LWKRIPQNVSTSNPEIAAIWAIGQKLWKKDFPGTYQALKGYNWTEPVAPIIEALEEKVRASVFNLIGRSYSSISLDTVVLM 128
BLAST of mRNA_E-fasciculatus_F_contig1555.3863.1 vs. uniprot
Match: A0A6A4W373_AMPAM (COP9 signalosome complex subunit 8 n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4W373_AMPAM) HSP 1 Score: 66.6 bits (161), Expect = 1.830e-11 Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 1
Query: 25 LWRRLPASAKAAGGETAALWEVGKCLWKRDMSGAQAALRGREWSAPLAPYVALIETRVRERQLTVISKAFTVLPLESVAGMLACSVE 285
LW+R PASAK G LW VG+ LW +D + LRG EW L V+ +E +RER LT++S+A+T + L +A S +
Sbjct: 48 LWKRAPASAKETDGPLGRLWSVGQKLWTKDFPATYSVLRG-EWPDYLQKAVSELEGVIRERVLTLVSRAYTSITLTDLAAFAGVSAD 133 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1555.3863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1555.3863.1 >prot_E-fasciculatus_F_contig1555.3863.1 ID=prot_E-fasciculatus_F_contig1555.3863.1|Name=mRNA_E-fasciculatus_F_contig1555.3863.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=100bp PGRNNGRHLWRRLPASAKAAGGETAALWEVGKCLWKRDMSGAQAALRGREback to top mRNA from alignment at E-fasciculatus_F_contig1555:15476..16489+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1555.3863.1 ID=mRNA_E-fasciculatus_F_contig1555.3863.1|Name=mRNA_E-fasciculatus_F_contig1555.3863.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1014bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1555:15476..16489+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1555:15476..16489+ >mRNA_E-fasciculatus_F_contig1555.3863.1 ID=mRNA_E-fasciculatus_F_contig1555.3863.1|Name=mRNA_E-fasciculatus_F_contig1555.3863.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=600bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1555:15476..16489+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |