mRNA_E-fasciculatus_F_contig10486.386.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10486.386.1
Unique NamemRNA_E-fasciculatus_F_contig10486.386.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10486.386.1 vs. uniprot
Match: A0A6H5K0M2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0M2_9PHAE)

HSP 1 Score: 605 bits (1559), Expect = 8.420e-207
Identity = 382/532 (71.80%), Postives = 398/532 (74.81%), Query Frame = 1 
Query:    1 SAVKYLHDKGITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLQRELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSAFSSGLVDLIRRCLAASPTHRPSASEVEAGIHALGKGNPLPPPRHKE-SSESDCGQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXLARDVXXXXXRGNEGSGRMVTAARAAGKSFSQQVLSPPKAPAVAAQPQLNPNSVAARRLASRKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAPGGSGGSPTGWPGASAAVA----VGNGAGGGDCHPDPDGWSNFAAFDHFPEALDLSGSGRQQGXXXXXXXXXXXSGSFGAGPFESPVVAIGESPLLLNVTPPGSEKGPSGGRRAVAGGVAALGEQLAGTSFMSPXXXXXXXXXXXXXXXXXLVGKIAPMGMTASLGGGNQ---QQAWLMAPPAGQAGLGGGRPLSGRVENGFLATFPAIERGRG 1572
            SAVKYLHDKGITHRD+KLENILRSSSG HKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYL+RELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDS FSSGLVDLIRRCL ASPTHRPSASEVEAGIHAL KGNPLPPPRHK+ SSE+DCG A                                         V  LAR+V     RG+ GSGR VTAA A GKS+SQQVL+PPKA  VAAQPQLNPNSVAARRLASRKG               XXXXXXXXXXXXXX  APGGS  SPTGWPGAS A A    V +GA GGD HPDPDGW NFAAFD FPEALDLS SGRQQG           S +FGA P ESPV A+GESP ++NVTPP SEK  SGG+RAVAGGVAALGEQL GTSFM  XXXXXXXXXXXXXXXXXLVGKI  +G  ASLG       Q+AWLMA PAGQA  GG RPLSGRVENGF ATFP    G G
Sbjct:  132 SAVKYLHDKGITHRDVKLENILRSSSGSHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLERELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSVFSSGLVDLIRRCLTASPTHRPSASEVEAGIHALSKGNPLPPPRHKKKSSEADCGHAAGTAAASVAGVAAQAATAPASNSGGLSNS------------VGALARNVVGG--RGDAGSGRTVTAAGAVGKSYSQQVLTPPKAKPVAAQPQLNPNSVAARRLASRKGSASANNTGSRNCLVPXXXXXXXXXXXXXXXXAPGGSXXSPTGWPGASTAAAAVATVASGACGGDGHPDPDGWGNFAAFDQFPEALDLSTSGRQQGS----------SSNFGAAPLESPVAAVGESPQVMNVTPPVSEKRQSGGKRAVAGGVAALGEQLEGTSFMPXXXXXXXXXXXXXXXXXXLVGKITQIGRAASLGXXXXXXXQRAWLMASPAGQAAPGGDRPLSGRVENGFSATFPRQASGGG 639
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10486.386.1 vs. uniprot
Match: D8LNU7_ECTSI (Protein kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNU7_ECTSI)

HSP 1 Score: 497 bits (1279), Expect = 1.180e-168
Identity = 310/421 (73.63%), Postives = 322/421 (76.48%), Query Frame = 1 
Query:    1 SAVKYLHDKGITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLQRELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSAFSSGLVDLIRRCLAASPTHRPSASEVEAGIHALGKGNPLPPPRHKE-SSESDCGQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXLARDVXXXXXRGNEGSGRMVTAARAAGKSFSQQVLSPPKAPAVAAQPQLNPNSVAARRLASRKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GRAPGGSGGSPTGWPGASAAVAVGNGAGGG-------DCHPDPDGWSNFAAFDHFPEALDLSGSGRQQGXXXXXXXXXXXSGSFGAGPFESPVVAIGESPLLLNV 1236
            SAVKYLHDKGITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYL+RELTE+VDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDS FSSGLVDLIRRCL ASPTHRPSASEVEAGIHAL KGNPLPPPRHK+ SSE+DCG A                                         V  LAR+V     RG+EGSGR VTAA AAGKS+SQQVL+PPKA  VAAQPQLNPNSVAARRLASRKG  XXXXXXXXXXXXXXXXXXXXXXXX    GRAPGGSGGSPTGWPGAS A                 D H DPDGWSNFAAFD FPEALDLS SGRQQG           S +FGA PFESPV A+GESPL++NV
Sbjct:  133 SAVKYLHDKGITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLERELTEKVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSVFSSGLVDLIRRCLTASPTHRPSASEVEAGIHALSKGNPLPPPRHKKKSSEADCGHAAGTAAASVGGVAAQAATAPASNSGGLSNS------------VGALARNVVGG--RGHEGSGRTVTAAGAAGKSYSQQVLTPPKAKPVAAQPQLNPNSVAARRLASRKGSAXXXXXXXXXXXXXXXXXXXXXXXXPDDHGRAPGGSGGSPTGWPGASTAXXXXXXXXXXXXXXXXXDGHLDPDGWSNFAAFDQFPEALDLSTSGRQQG-----------SSNFGAAPFESPVAAVGESPLVMNV 528
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10486.386.1 vs. uniprot
Match: A0A812U9J4_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U9J4_SYMMI)

HSP 1 Score: 178 bits (452), Expect = 2.330e-45
Identity = 91/164 (55.49%), Postives = 110/164 (67.07%), Query Frame = 1 
Query:    4 AVKYLHDKG--ITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLQRELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSAFSSGLVDLIRRCLAASPTHRPSASEVEAGIHALGKGNPLPP 489
            AV  LH+    + HRD+KLENIL S  G  KLCDFGSC+ G VP  T E+R+  EE + K TTQMYRAPEMVDLY++ ELTE  DIWALGCILY +C++ +PFQDAGNLGIL+AK+ +P DSA    +  LI R L      RPS   +     AL   NP+PP
Sbjct:   94 AVLPLHESSPPVIHRDLKLENILHSIGGDVKLCDFGSCMIGYVPTRTPEERSKAEEAISKETTQMYRAPEMVDLYMRDELTESTDIWALGCILYCLCFISHPFQDAGNLGILSAKVTMPHDSAVPPDMKVLIMRMLDMDAEARPSVQYLIQATDALATNNPIPP 257
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BLAST of mRNA_E-fasciculatus_F_contig10486.386.1 vs. uniprot
Match: A0A835ZCB7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCB7_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.070e-40
Identity = 78/154 (50.65%), Postives = 102/154 (66.23%), Query Frame = 1 
Query:   13 YLHDKGITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLQRELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSAFSSGLVDLIRRCLAASPTHRPSASEVEAGIHALGKG 474
            YLH  GI HRD+KLEN L ++ G  +LCDFGS V+G V L++A QRANE EV+E+TTTQ +RAPEM DL++ REL   VD+WALGC+ Y + YL++PF    NL I+NA+I  P     S     L+ R L A P  R SA++  + I A+  G
Sbjct:  134 YLHGMGIAHRDIKLENCLIAADGSCRLCDFGSAVRGPVSLESAAQRANEAEVIERTTTQQFRAPEMADLFVARELGTAVDVWALGCVAYTLAYLRHPFPSDSNLAIINARIVFPTAPPLSDDFKALVARMLVADPAARASAADALSCIAAMEAG 287
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10486.386.1 vs. uniprot
Match: A0A7S3P7A6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7A6_9STRA)

HSP 1 Score: 164 bits (414), Expect = 6.190e-40
Identity = 83/175 (47.43%), Postives = 118/175 (67.43%), Query Frame = 1 
Query:    1 SAVKYLHDKG--ITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLQRELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSAFSSGLVDLIRRCLAASPTHRPSASEVEAGIHALGKGNPLPPPRHKESSESD 519
            +AV YLH +   I HRD+K  N L  ++G +KLCDFGS V G V L T E RA  EEV++KTTTQM+RAPEMVDLY+ ++LT+  D+WALGC LY++ +L+N F++  NL IL+ K +IP+D+ +  GLV+L+ R L      R   +EV   + A+  G PLPP + +++ + D
Sbjct:  200 NAVSYLHAQRPPIVHRDLKPANFLVKNTG-YKLCDFGSAVFGHVDLRTPEARAEAEEVIQKTTTQMFRAPEMVDLYMAKKLTQATDVWALGCCLYSLAFLQNCFEEGSNLAILSRKYKIPEDNPYGDGLVELLDRMLTVDSKARADMTEVILCLSAVYSGRPLPPRKDRKARKED 373
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10486.386.1 vs. uniprot
Match: B7G086_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G086_PHATC)

HSP 1 Score: 161 bits (407), Expect = 8.910e-39
Identity = 83/170 (48.82%), Postives = 113/170 (66.47%), Query Frame = 1 
Query:    1 SAVKYLHDKG--ITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLQRELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSAFSSGLVDLIRRCLAASPTHRPSASEVEAGIHALGKGNPLPPPRHKE 504
            +AV YLH +   I HRD+K+ N L    G +KLCDFGS V G V L T + R+  EEV+EKTTTQM+RAPEMVDLY+ ++LT+  D+WALG  LY++ YL+N F++  NL IL+   +IP+++ +  GLV+LI R L     HR   +EV   + AL  G PLPP + K+
Sbjct:  208 NAVSYLHAQRPPIVHRDLKMANFL-VKDGAYKLCDFGSAVFGHVDLKTPQNRSEAEEVIEKTTTQMFRAPEMVDLYMCKKLTQATDVWALGVCLYSMAYLQNCFEEGSNLAILSNNYKIPEENHYGEGLVELIDRMLTIDSKHRADMTEVILCLSALYSGRPLPPRKDKK 376
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10486.386.1 vs. uniprot
Match: A0A7S1GKX8_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKX8_CYCTE)

HSP 1 Score: 157 bits (398), Expect = 2.140e-38
Identity = 83/177 (46.89%), Postives = 116/177 (65.54%), Query Frame = 1 
Query:    1 SAVKYLHDKG--ITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLQRELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSAFSSGLVDLIRRCLAASPTHRPSASEVEAGIHALGKGNPLPP----PRHKESSE 513
            +AV YLH +   I HRD+K  N L   +G +KLCDFGS V G V L T + RA  EEV++KTTTQM+RAPEMVDL++ ++LT+  D+WALGC LY++ +L+N F++  NL IL+   +IP+D+ +  GLV+LI R L      R   +EV   + A+  G PLPP    P+ K++ E
Sbjct:  195 NAVSYLHAQRPPIVHRDLKPVNFL-VKNGAYKLCDFGSAVFGHVELKTPKSRAEAEEVIQKTTTQMFRAPEMVDLFMAKKLTQSTDVWALGCCLYSLAFLQNCFEEGSNLAILSRNYKIPEDNPYGEGLVELIDRMLTLDSKARSDMTEVILCLSAIYSGRPLPPRKKVPKTKKAEE 370
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10486.386.1 vs. uniprot
Match: A0A7S4IND9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IND9_9STRA)

HSP 1 Score: 154 bits (390), Expect = 3.270e-38
Identity = 79/165 (47.88%), Postives = 108/165 (65.45%), Query Frame = 1 
Query:    1 SAVKYLHDKG--ITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLQRELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSAFSSGLVDLIRRCLAASPTHRPSASEVEAGIHALGKGNPLPP 489
            +AV YLH +   I HRD+K  N L   +G +KLCDFGS V G V L T   R+  EEV++KTTTQM+RAPEMVDLY+ ++LT+  D+WALGC LY++ + +N F++  NL IL+   +IPDD+ +  G+V+LI R L      R   +EV   + A+  G PLPP
Sbjct:   44 NAVSYLHAQRPPIVHRDLKPVNFL-VKNGAYKLCDFGSAVFGHVDLRTPRARSEAEEVIQKTTTQMFRAPEMVDLYMVKKLTQATDVWALGCCLYSLAFFQNCFEEGSNLAILSRNYKIPDDNPYGEGIVELIDRMLTVDVKARADMTEVILCLSAIYSGRPLPP 207
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10486.386.1 vs. uniprot
Match: A0A448ZSX2_9STRA (Protein kinase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSX2_9STRA)

HSP 1 Score: 156 bits (395), Expect = 4.870e-38
Identity = 85/176 (48.30%), Postives = 114/176 (64.77%), Query Frame = 1 
Query:    1 SAVKYLHDKG--ITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLQRELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSAFSSGLVDLIRRCLAASPTHRPSASEVEAGIHALGKGNPLPPPRHK-ESSESD 519
            +AV YLH +   I HRD+K  N L   +G +KLCDFGS V G V L T + R   +EVV+KTTTQM+RAPEMVDLY+ ++LT+  D+WALGC LY++ +L+N F++  NL IL+    IPDD+ +  GLV+LI R L      R   +EV   + A+  G PLPP +    SS+SD
Sbjct:   71 NAVSYLHAQRPPIVHRDLKPVNFL-VKNGAYKLCDFGSAVFGHVDLRTQQARVEADEVVQKTTTQMFRAPEMVDLYVAKKLTQSTDVWALGCCLYSMAFLQNCFEEGSNLAILSRNYTIPDDNPYGDGLVELIDRMLTVDYKARADMTEVILCLSAVYSGRPLPPRKKSTRSSKSD 245
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10486.386.1 vs. uniprot
Match: K0SSA5_THAOC (Protein kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SSA5_THAOC)

HSP 1 Score: 156 bits (395), Expect = 6.180e-38
Identity = 83/164 (50.61%), Postives = 106/164 (64.63%), Query Frame = 1 
Query:    1 SAVKYLHDKG--ITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLQRELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSAFSSGLVDLIRRCLAASPTHRPSASEVEAGIHALGKGNPLP 486
            +AV YLH +   I HRD+K  N L   +G +KLCDFGS + G V L T EQR   EE + KTTTQM+R+PEMVDLY+ R LTE  D+WALGC LY++ +L++ F++  NL IL+ K RIPDD+ +  G+ DLI R LA     R   SEV   + AL    PLP
Sbjct:  237 NAVSYLHAQHPPIIHRDLKPVNFL-IKNGSYKLCDFGSAIVGHVDLRTPEQRRAAEEAINKTTTQMFRSPEMVDLYMARRLTEATDVWALGCCLYSLAFLRDCFEEGSNLAILSRKYRIPDDNPYGPGVSDLIDRMLAGDYKERADMSEVILCLSALYSNRPLP 399
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10486.386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0M2_9PHAE8.420e-20771.80Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LNU7_ECTSI1.180e-16873.63Protein kinase domain-containing protein (Fragment... [more]
A0A812U9J4_SYMMI2.330e-4555.49Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A835ZCB7_9STRA2.070e-4050.65Kinase-like domain-containing protein (Fragment) n... [more]
A0A7S3P7A6_9STRA6.190e-4047.43Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B7G086_PHATC8.910e-3948.82Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1GKX8_CYCTE2.140e-3846.89Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S4IND9_9STRA3.270e-3847.88Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A448ZSX2_9STRA4.870e-3848.30Protein kinase domain-containing protein n=1 Tax=P... [more]
K0SSA5_THAOC6.180e-3850.61Protein kinase domain-containing protein n=1 Tax=T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10486contigE-fasciculatus_F_contig10486:123..4266 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score163.7
Seed ortholog evalue2.4e-37
Seed eggNOG ortholog2850.Phatr46154
KEGG koko:K08853
EggNOG free text desc.Protein tyrosine kinase
EggNOG OGs2XB8V@2836,KOG1989@1,KOG1989@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein kinase domain
Ec32 orthologEc-08_005770.1
Exons6
Model size1619
Cds size1617
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10486.386.1prot_E-fasciculatus_F_contig10486.386.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10486 123..4264 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927545.7695336-CDS-E-fasciculatus_F_contig10486:122..2391622927545.7695336-CDS-E-fasciculatus_F_contig10486:122..239Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10486 123..239 +
1695995588.5019755-CDS-E-fasciculatus_F_contig10486:122..2391695995588.5019755-CDS-E-fasciculatus_F_contig10486:122..239Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10486 123..239 +
1622927545.779335-CDS-E-fasciculatus_F_contig10486:594..7351622927545.779335-CDS-E-fasciculatus_F_contig10486:594..735Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10486 595..735 +
1695995588.5128624-CDS-E-fasciculatus_F_contig10486:594..7351695995588.5128624-CDS-E-fasciculatus_F_contig10486:594..735Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10486 595..735 +
1622927545.788072-CDS-E-fasciculatus_F_contig10486:1478..15611622927545.788072-CDS-E-fasciculatus_F_contig10486:1478..1561Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10486 1479..1561 +
1695995588.5282478-CDS-E-fasciculatus_F_contig10486:1478..15611695995588.5282478-CDS-E-fasciculatus_F_contig10486:1478..1561Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10486 1479..1561 +
1622927545.8022394-CDS-E-fasciculatus_F_contig10486:2176..22761622927545.8022394-CDS-E-fasciculatus_F_contig10486:2176..2276Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10486 2177..2276 +
1695995588.5374556-CDS-E-fasciculatus_F_contig10486:2176..22761695995588.5374556-CDS-E-fasciculatus_F_contig10486:2176..2276Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10486 2177..2276 +
1622927545.8137505-CDS-E-fasciculatus_F_contig10486:2674..29951622927545.8137505-CDS-E-fasciculatus_F_contig10486:2674..2995Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10486 2675..2995 +
1695995588.5468361-CDS-E-fasciculatus_F_contig10486:2674..29951695995588.5468361-CDS-E-fasciculatus_F_contig10486:2674..2995Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10486 2675..2995 +
1622927545.8231983-CDS-E-fasciculatus_F_contig10486:3409..42641622927545.8231983-CDS-E-fasciculatus_F_contig10486:3409..4264Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10486 3410..4264 +
1695995588.5572693-CDS-E-fasciculatus_F_contig10486:3409..42641695995588.5572693-CDS-E-fasciculatus_F_contig10486:3409..4264Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10486 3410..4264 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10486.386.1

>prot_E-fasciculatus_F_contig10486.386.1 ID=prot_E-fasciculatus_F_contig10486.386.1|Name=mRNA_E-fasciculatus_F_contig10486.386.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=539bp
SAVKYLHDKGITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQR
ANEEEVVEKTTTQMYRAPEMVDLYLQRELTERVDIWALGCILYAVCYLKN
PFQDAGNLGILNAKIRIPDDSAFSSGLVDLIRRCLAASPTHRPSASEVEA
GIHALGKGNPLPPPRHKESSESDCGQAAAAAVAAAAAAAAAAAGGVGAAT
SQAATAPASTSGGLSNNSVGGLARDVGGGGGRGNEGSGRMVTAARAAGKS
FSQQVLSPPKAPAVAAQPQLNPNSVAARRLASRKGSASSSKTGSRSSLVP
PPPPPPSAQRPDDDGRAPGGSGGSPTGWPGASAAVAVGNGAGGGDCHPDP
DGWSNFAAFDHFPEALDLSGSGRQQGLDLSTSGRLQGSGSFGAGPFESPV
VAIGESPLLLNVTPPGSEKGPSGGRRAVAGGVAALGEQLAGTSFMSPPPE
QQQQNQQQQQQQQQLVGKIAPMGMTASLGGGNQQQAWLMAPPAGQAGLGG
GRPLSGRVENGFLATFPAIERGRGRCKRRLHRHRQQSTT
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mRNA from alignment at E-fasciculatus_F_contig10486:123..4266+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10486.386.1 ID=mRNA_E-fasciculatus_F_contig10486.386.1|Name=mRNA_E-fasciculatus_F_contig10486.386.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4144bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10486:123..4266+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGTGCTGTCAAGTACCTGCACGACAAGGGCATCACCCACCGAGACATGAA
GCTAGAGAACATCCTTCGGTCTTCCTCGGGACCCCATAAGCTCTGCGACT
TCGGCTCTTGCGTTCAGGTGTGGTGTGTCCACTTTGCCACATGACGGCCA
ATGTGTCACCCTTTGGTGCCTGCGATGGTGTGTCCACTTCGCCACATGAT
GCCAAATGTTGCGGTGCTTCCGACCCACGATTGTGGTTTGCCCGCTTTGC
CACATGATGCCAGGGCGTGTCCCCCTTTCCTGCCTTCGACGCATGTTGAT
GGTGTGTCCACATGATGCCGGGATATTGCCGTTCAGTTTCTGCGACGCAT
GATGTTGGTGTAGTCCACATGATGCCGATGTGGTGCTTGCGACGCACGAT
TGTTGTGTGTCCACTTTGCCGCATGATGCCGATGTGTCCCCCCTTCGGTG
CCTGCAACCGTCGTCGCGGCAGGGTCGAGTGCCGCTGGACACGGCCGAGC
AACGAGCTAACGAGGAGGAGGTGGTGGAGAAGACGACGACACAGATGTAC
CGCGCACCCGAGATGGTGGACCTGTACCTCCAGAGGGAGCTCACGGAGAG
AGTGGACATTTGGGTGAGTATGGTATGCAGCAGTTGTTAATGTTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTATTGTTGTTG
TCGTCGTCGTCGACGTCTTCATATTTAAAACTGTGCCGGTCTCCGCTCAG
TACTGTACCTTCTAATACCCGTACAGGTCCAACTGACGCGGGCGCCTAGT
ACGGGCTGTTTTTGTTTAGTGTGGCTTCGTCGCATGTGTACGCAAGTGTT
GCCGTGAGTCTGGTCGGCTGGGTGTTGCAGCGAAGTGGATGTGTGCAACG
GTTGTACGTTGTTGGGGGATGCTGGTCAATGTTGAGGGGAGAGGGTTGGA
TGGCCGGCGGTTTGCCTCGTAGCCGTCCTCTGCCACGACACCTATTTCTG
CAACAGAAAGTCCCTGGTTGCTGATTGCTGTGACAGAGCGACACCGTCTA
AGAACCTAGAGGTGAAGAGCTTCGGGCTTGAACAGAGATCGCTTCTAAGA
ACTGGATTGACTACACGATCATCCCTGAATGTATACAGCAGTTGCCGCTG
GGTTAGCACACGGAAAAGAGAAGTACCTCAATGTGCGACCTTTTTTTGTA
CTCGTTCTGTCGTCCTGACACTCTCCCGCCTGTCGCCTAGCTCGAAGGCT
GCTCGTTGTGGCTGTTGGCTACGTCTGTACCGACCCGGGGTTACCCTTGC
CCGCACTCTGCATCCATTCATCCCACCCTCCCCTGCTGTTCGATGGACCG
CTCCAGGCCCTAGGCTGCATACTGTACGCCGTGTGCTACCTGAAGAACCC
CTTCCAGGATGCTGGAAACCTGGGGATTCTGAACGCAAAGTGAGACCCTG
CCGAGAGGGTGCCGTCCTTTAGAGAGTTGTTGGTTATCTCATGCCTCGCT
AACTGCACCGGGGCCAACGGTATTACCGAAAACGCTTGCCGAAGTATCTA
AAATTGCGCGCTCTTGGGAGTTGGTAAAGAATTGATGGCGTTTTGTGTTC
AAGTATGAAGCCGTGGCACCCGCTGTAGCGCGGATGGTCACCCGTTGGGT
GGTTGTGGCGGAAGCGTGCGTGTTTTGCCGCTCAGAGCATTGTCGTGGAT
ATTACCATAGCTTGCCACCGCCGCGACCGGGTCGCACGCCGCGCTACGCA
CCACCAGCGCTGTCAACATCAAGTGGATTCCCCTGCCCTTCTCCTCCCTC
CGGCCATCTCTCAACCGACTGCCGTTCAAAATTGTTCTCTCGCTGACTGC
AATTGTTGTGAAGATTCGCGAAAATCGGAAGAGGGTCAGACCCCACACGC
CGGTCGTCAGTCGTCCCGCCTGGTCCCCAACCAACGTTGGCGAATGCTGC
GGCGGTTTGCTCGTACGCACGGCCCGTGCCCGTGTACCACCCTTATCCAT
TTCCCGTGTGTATTTTTTCACCACCTACTGCTGTACACTACTGTACACGC
CCAGGATTCGCATCCCCGACGACTCTGCTTTCTCTTCTGGCTTGGTGGAT
CTCATCCGGCGCTGCCTCGCCGCGTCACCAACTCACCGACCGAGCGCATC
CGAGGTATTGTCTTGGAATTTTCCCAGCGCTGCTGCAGGCAGCAACGTGT
ATAGAGTTGGGGATTCAGGGTTGGGTTAAAAAGTCCAATAACTGCTGTTA
ATTGTTGTCAGGGTTCTAGCAGCAAGAGTAGGTGTTTGGCATACCAGTGG
GTAGTGTAGGGCTTGCCCGGGAAGGACTTCATGGCGTGCCTCCTGCAGCG
AACATTTCACGCTAGATGACTACCGTATCACCCTCCCATGCCTCCATGTG
GGCAGGGGTCCGTTGATGGATGGCTCCGGGAGGACGAACGGGCGTGATCA
GTACAGGACTGCACAACTATCCACGTCGCTGTCGCTCTGCCAAGCCCCAC
TCCCCACACGCCTAGTGCCGACCCCCGTCGCCCTTTACCAAACACACGAC
AGGTCGAGGCCGGCATCCATGCCTTGGGAAAAGGGAACCCTTTGCCCCCG
CCGAGACACAAGGAGTCGTCGGAATCGGATTGCGGTCAAGCTGCTGCTGC
TGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCGGGAGGTGTCG
GTGCTGCAACCTCGCAGGCAGCAACTGCTCCAGCGAGCACCAGCGGGGGC
CTTTCCAACAACAGTGTCGGGGGCCTTGCCCGCGATGTTGGGGGTGGCGG
TGGGAGGGGGAACGAGGGGAGCGGGAGGATGGTGACGGCGGCGAGAGCGG
CGGGCAAAAGTTTTTCGCAACAGGTGCGCACAGCGATAGCTTCCCAACCG
GTGTGGGTAGCTGGCGAGGCACTCATTTCAACACTACTTTGTCGCGGTGC
GCACGAGTGGTTGTTGTTGTGTGGGGGTGGTTGTCAGGGATTTGCGACTG
AGGCTTTTTACATTTTTTTTTTAGTGCCATCCCTAGCCTGGTGCATAGCG
TGCAGCCGTGTTGTGATGAAGGCGCCACCCCGCCCGCCAATCCTTCTTGA
TGATGCCACTCTCCAAACCTCGATGAACGCCCAGCATAATTTTTTTTTTC
CAGGGTGTTACGGCGTTATTCCATGTGTTCTGATTTTTGTCCCAAGCCCG
ACCGCCCTGTGTATCCTTGCACATCAACCTGTAACCCCGACGCCAACCCT
AACCCTAACCCTAACCGCAACCCTAACGCCAACCCAGGTTCTCAGCCCCC
CGAAGGCCCCGGCCGTAGCAGCTCAACCCCAGCTAAACCCGAACTCGGTG
GCTGCCAGACGACTAGCTTCTCGAAAGGGTTCGGCTTCTTCAAGTAAAAC
CGGGAGTAGAAGTAGTTTGGTCCCGCCGCCGCCGCCGCCGCCGTCTGCGC
AAAGGCCGGATGATGATGGCCGTGCCCCCGGCGGCAGCGGCGGCTCGCCA
ACGGGGTGGCCGGGAGCATCGGCAGCGGTGGCGGTAGGGAACGGGGCTGG
CGGCGGCGATTGCCACCCAGACCCGGACGGTTGGAGCAATTTCGCGGCCT
TTGATCATTTCCCGGAGGCGTTGGATTTGTCCGGGTCAGGTCGACAGCAG
GGTTTGGATTTGTCCACGTCAGGTCGACTCCAGGGTAGTGGTAGTTTCGG
GGCGGGACCGTTTGAGTCGCCGGTGGTGGCAATCGGAGAGTCCCCGCTGC
TGCTGAACGTGACACCACCCGGCAGCGAGAAGGGACCGAGCGGCGGCAGG
AGGGCGGTGGCGGGTGGTGTGGCGGCCCTTGGGGAGCAGCTCGCGGGGAC
CTCGTTCATGTCACCGCCCCCTGAGCAACAACAGCAGAACCAGCAGCAAC
AGCAGCAACAGCAGCAGCTGGTCGGGAAGATCGCCCCAATGGGAATGACG
GCTAGTTTGGGCGGCGGCAATCAGCAGCAGGCGTGGTTGATGGCTCCCCC
CGCCGGCCAGGCTGGGCTGGGGGGAGGCCGACCGTTGAGCGGCCGCGTCG
AGAACGGGTTTTTGGCGACATTTCCGGCAATCGAGCGGGGGCGGGGGCGT
TGCAAGCGACGGCTGCATCGGCATCGGCAGCAGTCCACAACGGC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10486:123..4266+

>mRNA_E-fasciculatus_F_contig10486.386.1 ID=mRNA_E-fasciculatus_F_contig10486.386.1|Name=mRNA_E-fasciculatus_F_contig10486.386.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3234bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10486:123..4266+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGTGCTGTCAAGTACCTGCACGACAAGGGCATCACCCACCGAGACATGAA
GCTAGAGAACATCCTTCGGTCTTCCTCGGGACCCCATAAGCTCTGCGACT
TCGGCTCTTGCGTTCAGAGTGCTGTCAAGTACCTGCACGACAAGGGCATC
ACCCACCGAGACATGAAGCTAGAGAACATCCTTCGGTCTTCCTCGGGACC
CCATAAGCTCTGCGACTTCGGCTCTTGCGTTCAGGGTCGAGTGCCGCTGG
ACACGGCCGAGCAACGAGCTAACGAGGAGGAGGTGGTGGAGAAGACGACG
ACACAGATGTACCGCGCACCCGAGATGGTGGACCTGTACCTCCAGAGGGA
GCTCACGGAGAGAGTGGACATTTGGGGTCGAGTGCCGCTGGACACGGCCG
AGCAACGAGCTAACGAGGAGGAGGTGGTGGAGAAGACGACGACACAGATG
TACCGCGCACCCGAGATGGTGGACCTGTACCTCCAGAGGGAGCTCACGGA
GAGAGTGGACATTTGGGCCCTAGGCTGCATACTGTACGCCGTGTGCTACC
TGAAGAACCCCTTCCAGGATGCTGGAAACCTGGGGATTCTGAACGCAAAG
CCCTAGGCTGCATACTGTACGCCGTGTGCTACCTGAAGAACCCCTTCCAG
GATGCTGGAAACCTGGGGATTCTGAACGCAAAGATTCGCATCCCCGACGA
CTCTGCTTTCTCTTCTGGCTTGGTGGATCTCATCCGGCGCTGCCTCGCCG
CGTCACCAACTCACCGACCGAGCGCATCCGAGGATTCGCATCCCCGACGA
CTCTGCTTTCTCTTCTGGCTTGGTGGATCTCATCCGGCGCTGCCTCGCCG
CGTCACCAACTCACCGACCGAGCGCATCCGAGGTCGAGGCCGGCATCCAT
GCCTTGGGAAAAGGGAACCCTTTGCCCCCGCCGAGACACAAGGAGTCGTC
GGAATCGGATTGCGGTCAAGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCGGGAGGTGTCGGTGCTGCAACCTCGCAGGCA
GCAACTGCTCCAGCGAGCACCAGCGGGGGCCTTTCCAACAACAGTGTCGG
GGGCCTTGCCCGCGATGTTGGGGGTGGCGGTGGGAGGGGGAACGAGGGGA
GCGGGAGGATGGTGACGGCGGCGAGAGCGGCGGGCAAAAGTTTTTCGCAA
CAGGTCGAGGCCGGCATCCATGCCTTGGGAAAAGGGAACCCTTTGCCCCC
GCCGAGACACAAGGAGTCGTCGGAATCGGATTGCGGTCAAGCTGCTGCTG
CTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCGGGAGGTGTC
GGTGCTGCAACCTCGCAGGCAGCAACTGCTCCAGCGAGCACCAGCGGGGG
CCTTTCCAACAACAGTGTCGGGGGCCTTGCCCGCGATGTTGGGGGTGGCG
GTGGGAGGGGGAACGAGGGGAGCGGGAGGATGGTGACGGCGGCGAGAGCG
GCGGGCAAAAGTTTTTCGCAACAGGTTCTCAGCCCCCCGAAGGCCCCGGC
CGTAGCAGCTCAACCCCAGCTAAACCCGAACTCGGTGGCTGCCAGACGAC
TAGCTTCTCGAAAGGGTTCGGCTTCTTCAAGTAAAACCGGGAGTAGAAGT
AGTTTGGTCCCGCCGCCGCCGCCGCCGCCGTCTGCGCAAAGGCCGGATGA
TGATGGCCGTGCCCCCGGCGGCAGCGGCGGCTCGCCAACGGGGTGGCCGG
GAGCATCGGCAGCGGTGGCGGTAGGGAACGGGGCTGGCGGCGGCGATTGC
CACCCAGACCCGGACGGTTGGAGCAATTTCGCGGCCTTTGATCATTTCCC
GGAGGCGTTGGATTTGTCCGGGTCAGGTCGACAGCAGGGTTTGGATTTGT
CCACGTCAGGTCGACTCCAGGGTAGTGGTAGTTTCGGGGCGGGACCGTTT
GAGTCGCCGGTGGTGGCAATCGGAGAGTCCCCGCTGCTGCTGAACGTGAC
ACCACCCGGCAGCGAGAAGGGACCGAGCGGCGGCAGGAGGGCGGTGGCGG
GTGGTGTGGCGGCCCTTGGGGAGCAGCTCGCGGGGACCTCGTTCATGTCA
CCGCCCCCTGAGCAACAACAGCAGAACCAGCAGCAACAGCAGCAACAGCA
GCAGCTGGTCGGGAAGATCGCCCCAATGGGAATGACGGCTAGTTTGGGCG
GCGGCAATCAGCAGCAGGCGTGGTTGATGGCTCCCCCCGCCGGCCAGGCT
GGGCTGGGGGGAGGCCGACCGTTGAGCGGCCGCGTCGAGAACGGGTTTTT
GGCGACATTTCCGGCAATCGAGCGGGGGCGGGGGCGTTGCAAGCGACGGC
TGCATCGGCATCGGCAGCAGTCCACAACGGTTCTCAGCCCCCCGAAGGCC
CCGGCCGTAGCAGCTCAACCCCAGCTAAACCCGAACTCGGTGGCTGCCAG
ACGACTAGCTTCTCGAAAGGGTTCGGCTTCTTCAAGTAAAACCGGGAGTA
GAAGTAGTTTGGTCCCGCCGCCGCCGCCGCCGCCGTCTGCGCAAAGGCCG
GATGATGATGGCCGTGCCCCCGGCGGCAGCGGCGGCTCGCCAACGGGGTG
GCCGGGAGCATCGGCAGCGGTGGCGGTAGGGAACGGGGCTGGCGGCGGCG
ATTGCCACCCAGACCCGGACGGTTGGAGCAATTTCGCGGCCTTTGATCAT
TTCCCGGAGGCGTTGGATTTGTCCGGGTCAGGTCGACAGCAGGGTTTGGA
TTTGTCCACGTCAGGTCGACTCCAGGGTAGTGGTAGTTTCGGGGCGGGAC
CGTTTGAGTCGCCGGTGGTGGCAATCGGAGAGTCCCCGCTGCTGCTGAAC
GTGACACCACCCGGCAGCGAGAAGGGACCGAGCGGCGGCAGGAGGGCGGT
GGCGGGTGGTGTGGCGGCCCTTGGGGAGCAGCTCGCGGGGACCTCGTTCA
TGTCACCGCCCCCTGAGCAACAACAGCAGAACCAGCAGCAACAGCAGCAA
CAGCAGCAGCTGGTCGGGAAGATCGCCCCAATGGGAATGACGGCTAGTTT
GGGCGGCGGCAATCAGCAGCAGGCGTGGTTGATGGCTCCCCCCGCCGGCC
AGGCTGGGCTGGGGGGAGGCCGACCGTTGAGCGGCCGCGTCGAGAACGGG
TTTTTGGCGACATTTCCGGCAATCGAGCGGGGGCGGGGGCGTTGCAAGCG
ACGGCTGCATCGGCATCGGCAGCAGTCCACAACG
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