mRNA_E-fasciculatus_F_contig15481.3832.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15481.3832.1
Unique NamemRNA_E-fasciculatus_F_contig15481.3832.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15481.3832.1 vs. uniprot
Match: D7FV48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV48_ECTSI)

HSP 1 Score: 401 bits (1030), Expect = 1.210e-129
Identity = 236/242 (97.52%), Postives = 239/242 (98.76%), Query Frame = 1 
Query:    1 ATTETGELQRREDARARRLATAREEGLKVDLEALRERAEEMSGRAREAQRAADENSDKARGFDQVEALLRTTRLELDAARALSKSQAAALVDVAESEKAAARTAQDASQRSLMLEMDKTYLQRELSEAQNKADRLGRESEAASERLRDLERSKDTLAAELVSVRERTRSEHEERLEAEVGRLREQSAKELADIRASGREVYERENETLREARKDALQDLSRVRSELSELQRAHEDLVITMAK 726
            ATTET ELQRREDARARRLATAREEGLKVDLEALRERAEEMSGRAREAQRAADENSDKARGFD+VE+LLRTTRLELDAARALSKSQAAALV+VAESEKAAARTAQDASQRSLMLEMDKTYLQRELSEAQNKADRL RESEA SERLRDLERSKDTLAAELVSVRERTRSEHEERLEAEVGRLREQSAKELADIRASGREVYERENETLREARKDALQDLSRVRSELSELQRAHEDLVITMAK
Sbjct:  419 ATTETAELQRREDARARRLATAREEGLKVDLEALRERAEEMSGRAREAQRAADENSDKARGFDEVESLLRTTRLELDAARALSKSQAAALVEVAESEKAAARTAQDASQRSLMLEMDKTYLQRELSEAQNKADRLDRESEAVSERLRDLERSKDTLAAELVSVRERTRSEHEERLEAEVGRLREQSAKELADIRASGREVYERENETLREARKDALQDLSRVRSELSELQRAHEDLVITMAK 660
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15481.3832.1 vs. uniprot
Match: A0A836CKM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKM7_9STRA)

HSP 1 Score: 113 bits (283), Expect = 5.060e-25
Identity = 95/264 (35.98%), Postives = 132/264 (50.00%), Query Frame = 1 
Query:    1 ATTETGELQRREDARARRLATAREEGLKVDLEALRERAEEMSGRAREAQRAADENSDKARGFDQVEALLRTTRLELDAARALSKSQAAALVDVAESEKAAARTAQDASQRSLMLEMDKTYLQRELSEAQNKADRLGRESEAASERLRDLERSKDTLAAELVSVRERTRSEHEERLEAEVGRLREQSAKELADIRASGREVYERENETLREARKD--------------------------ALQDLSRVRSELSELQRAHEDLVI 714
            ATTETGEL+ R+ ARARRLA+AREEGL+++L+A +   E    RA+EA++   E +DK R +D   A                      + ++ +   AAAR A +  +R+ +LE+DK +L+REL  A+ +A+   RES                          R R++ EERL AEV RLRE +A+E A  RA GRE  EREN  LREAR +                          AL      R+EL ++ RAHE+LV+
Sbjct:  657 ATTETGELRERDGARARRLASAREEGLQLELDAAKGTMEAAKLRAKEAEQQVAELTDKGRRYDAAAARAEAXXXXXXXXXXXXXXXXXXVAELTDGAAAAARRADECERRAALLELDKAHLRRELGAAEARAEAAARESXXXXXXXXXXXXXXXXXXXXXXXXXXRPRADFEERLAAEVARLREGAAREAAAARAEGREALERENRALREARAEKQQARRLTLSASLPPLLLRVDTSATQALAAAEAARAELRDVSRAHEELVL 920
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BLAST of mRNA_E-fasciculatus_F_contig15481.3832.1 vs. uniprot
Match: A0A397AKA6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AKA6_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.280e-13
Identity = 53/131 (40.46%), Postives = 82/131 (62.60%), Query Frame = 1 
Query:  322 SQRSLMLEMDKTYLQRELSEAQNKADRLGRESEAASERLRDLERSKDTLAAELVSVRERTRSEHEERLEAEVGRLREQSAKELADIRASGREVYERENETLREARKDALQDLSRVRSELSELQRAHEDLVI 714
            +Q+  +L +DK YL ++      K  +L R  + A+   R LE SK T   ++ S RE TRS  E+R+E E+ +L++ S KE+  +R +G+++YEREN  LREAR DA   L  + +++SELQ A+ED V+
Sbjct:  124 AQKVQLLSVDKAYLVQDKELTAEKVLQLTRALDDATATCRRLELSKATFLEQIESTREETRSLFEKRMEVELAKLQDASRKEMDLLRDNGKQLYERENRLLREARLDAQSQLDHLHTKVSELQHAYEDKVL 254
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BLAST of mRNA_E-fasciculatus_F_contig15481.3832.1 vs. uniprot
Match: A0A418FG42_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FG42_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.460e-13
Identity = 53/130 (40.77%), Postives = 81/130 (62.31%), Query Frame = 1 
Query:  322 SQRSLMLEMDKTYLQRELSEAQNKADRLGRESEAASERLRDLERSKDTLAAELVSVRERTRSEHEERLEAEVGRLREQSAKELADIRASGREVYERENETLREARKDALQDLSRVRSELSELQRAHEDLV 711
            +Q+  +L +DK YL ++      K  +L R  + A+   R LE SK T   ++ S RE TRS  E+R+E E+ +L++ S KE+  +R +G+++YEREN  LREAR DA   L  + +++SELQ A+ED V
Sbjct:  232 AQKVQLLSVDKAYLVQDKELTAEKVLQLTRALDDATATCRRLELSKATFLEQIESTREETRSLFEKRMEVELAKLQDASRKEMDLLRDNGKQLYERENRLLREARLDAQSQLDHLHTKVSELQHAYEDKV 361
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BLAST of mRNA_E-fasciculatus_F_contig15481.3832.1 vs. uniprot
Match: W4GA44_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GA44_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.030e-13
Identity = 53/131 (40.46%), Postives = 82/131 (62.60%), Query Frame = 1 
Query:  322 SQRSLMLEMDKTYLQRELSEAQNKADRLGRESEAASERLRDLERSKDTLAAELVSVRERTRSEHEERLEAEVGRLREQSAKELADIRASGREVYERENETLREARKDALQDLSRVRSELSELQRAHEDLVI 714
            +Q+  +L +DK YL ++      K  +L R  + A+   R LE SK T   ++ S RE TRS  E+R+E E+ +L++ S KE+  +R +G+++YEREN  LREAR DA   L  + +++SELQ A+ED V+
Sbjct:  367 AQKVQLLSVDKAYLVQDKELTAEKILQLTRALDDATATCRRLELSKATFLEQIESTREETRSLFEKRMEVELAKLQDASRKEMDLLRDNGKQLYERENRLLREARLDAQSQLDHLHTKVSELQHAYEDKVL 497
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BLAST of mRNA_E-fasciculatus_F_contig15481.3832.1 vs. uniprot
Match: A0A6G0WMT4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMT4_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.590e-13
Identity = 46/130 (35.38%), Postives = 79/130 (60.77%), Query Frame = 1 
Query:  337 MLEMDKTYLQRELSEAQNKADRLGRESEAASERLRDLERSKDTLAAELVSVRERTRSEHEERLEAEVGRLREQSAKELADIRASGREVYERENETLREARKDALQDLSRVRSELSELQRAHEDLVITMAK 726
            +L  DK YL ++   A +K  ++ R+ + +  + R+LE SK+T   +L   RE +R   E R+E E+ +L++ S KE+  +R  G+++YEREN  LREAR+D +  +  ++  L+E Q A+ED V+   +
Sbjct:  231 LLAQDKAYLLQDKEAALDKYHKVARQLDDSLAKARELELSKETFIEQLAQAREESRVLFEHRMEVELAKLQDASRKEMEILRDGGKQMYERENRMLREARQDCIAQIEHLQKRLAEFQHAYEDKVLEFTR 360
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BLAST of mRNA_E-fasciculatus_F_contig15481.3832.1 vs. uniprot
Match: A0A485LEL3_9STRA (Aste57867_20200 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LEL3_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 3.420e-11
Identity = 44/130 (33.85%), Postives = 78/130 (60.00%), Query Frame = 1 
Query:  337 MLEMDKTYLQRELSEAQNKADRLGRESEAASERLRDLERSKDTLAAELVSVRERTRSEHEERLEAEVGRLREQSAKELADIRASGREVYERENETLREARKDALQDLSRVRSELSELQRAHEDLVITMAK 726
            +L  DK YL +E   +  K  +L  + +      R LE S++T   ++   RE +R   E R++ E+ +L++ S KE+  IR SG+++YEREN  LR+AR D++  +  ++++L+ LQ A+ED V+ + +
Sbjct:  363 LLTTDKAYLVQEKDASMEKVHKLASQLDDVVANARRLELSRETFVEQVAQAREESRVLFEHRMQVELTKLQDASRKEMDVIRESGKQMYERENRLLRDARTDSVAHIDHLQNKLAALQHAYEDKVLELTR 492
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BLAST of mRNA_E-fasciculatus_F_contig15481.3832.1 vs. uniprot
Match: A0A6P7SJ59_OCTVU (progesterone-induced-blocking factor 1-like isoform X1 n=3 Tax=Octopus TaxID=6643 RepID=A0A6P7SJ59_OCTVU)

HSP 1 Score: 67.8 bits (164), Expect = 2.250e-9
Identity = 39/125 (31.20%), Postives = 78/125 (62.40%), Query Frame = 1 
Query:  337 MLEMDKTYLQRELSEAQNKADRLGRESEAASERLRDLERSKDTLAAELVSVRERTRSEHEERLEAEVGRLREQSAKELADIRASGREVYERENETLREARKDALQDLSRVRSELSELQRAHEDLV 711
            +L+ DKTYL R+ SE  N+   +G + +  + +L D ++S++ L  + +S R+  +S++E RL+ E+ +++ ++  E+  +R S +E+Y+REN  LREAR  A+ +  +   +  E+Q  ++ L+
Sbjct:  321 LLQQDKTYLSRQASELTNRCTLIGEKVQETNLQLEDAKKSREELYEKYISSRDHYKSDYETRLKEELAKIQLKTNMEIEKLRTSTKEMYDRENRNLREARDFAVMEKDKFELKCQEIQDKYDQLM 445
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BLAST of mRNA_E-fasciculatus_F_contig15481.3832.1 vs. uniprot
Match: A0A812EDR0_SEPPH (PIBF1 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812EDR0_SEPPH)

HSP 1 Score: 67.0 bits (162), Expect = 3.490e-9
Identity = 43/125 (34.40%), Postives = 76/125 (60.80%), Query Frame = 1 
Query:  337 MLEMDKTYLQRELSEAQNKADRLGRESEAASERLRDLERSKDTLAAELVSVRERTRSEHEERLEAEVGRLREQSAKELADIRASGREVYERENETLREARKDALQDLSRVRSELSELQRAHEDLV 711
            +L  DK YL R++SE  N+   L  + E ++ +L + ++S++ +  + VS R+  + E+E +L+ E+  +R Q+  E+  +R S +E+YEREN  LREAR+ A+ +  +  S   ELQ  +E L+
Sbjct:   68 LLTQDKNYLTRQVSELTNRCSLLAEKIEESNLQLENAKKSREEMYEKYVSSRDLYKCEYENKLKDELETIRAQTNSEIERLRTSTKELYERENSNLREAREMAILEKEKFESSGQELQAKYEQLL 192
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BLAST of mRNA_E-fasciculatus_F_contig15481.3832.1 vs. uniprot
Match: A0A7S1UE72_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE72_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.210e-8
Identity = 61/169 (36.09%), Postives = 84/169 (49.70%), Query Frame = 1 
Query:   19 ELQRREDARARRLATAREEGLKVDLEALRERAEEMSGRAREAQRAADENSDKARGFDQVEALLRTTRLELDAARALSKSQAAAL----VDVAESEKAAARTAQDASQRSLMLEMDKTYLQRELSEAQNKADRLGRESEAASERLRDLERSKDTLAAELVSVRERTRSEH 513
            E  +RE ARARRLA AREEGLK++L A     +    + + +Q       DK R FD V A     R E    R  S+ QA +L      +A+ EKAAA    D + R + L +DK YL+R L+EA  + DR    +    +  R LER +      LV  + R + E+
Sbjct:    2 EAAQREAARARRLAGAREEGLKLELGAKDAELQSAVQKLKASQSRVATIEDKERRFDAVHAEREALRDEAQNLRRTSEEQAKSLRGFATSLADQEKAAA----DLNTRCIALSIDKDYLERCLAEATARGDRAEANAAQHKDEARRLERRRAEAVDALVEHQRRAQEEY 166
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15481.3832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV48_ECTSI1.210e-12997.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKM7_9STRA5.060e-2535.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A397AKA6_9STRA1.280e-1340.46Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A418FG42_9STRA1.460e-1340.77Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
W4GA44_9STRA2.030e-1340.46Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6G0WMT4_9STRA2.590e-1335.38Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485LEL3_9STRA3.420e-1133.85Aste57867_20200 protein n=1 Tax=Aphanomyces stella... [more]
A0A6P7SJ59_OCTVU2.250e-931.20progesterone-induced-blocking factor 1-like isofor... [more]
A0A812EDR0_SEPPH3.490e-934.40PIBF1 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A... [more]
A0A7S1UE72_9STRA3.210e-836.09Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15481contigE-fasciculatus_F_contig15481:459..3014 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score402.9
Seed ortholog evalue1.1e-109
Seed eggNOG ortholog2880.D7FV48
Preferred namePIBF1
KEGG koko:K16538
GOsGO:0000070,GO:0000226,GO:0000278,GO:0000280,GO:0000819,GO:0001817,GO:0001818,GO:0001819,GO:0001932,GO:0001933,GO:0001934,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0003674,GO:0005102,GO:0005126,GO:0005136,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007080,GO:0008104,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010562,GO:0010563,GO:0010565,GO:0010604,GO:0010605,GO:0010646,GO:0010647,GO:0010648,GO:0015630,GO:0016043,GO:0016310,GO:0018108,GO:0018193,GO:0018212,GO:0019216,GO:0019217,GO:0019220,GO:0019222,GO:0019538,GO:0022402,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030030,GO:0030031,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031392,GO:0031393,GO:0031399,GO:0031400,GO:0031401,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032653,GO:0032655,GO:0032695,GO:0032733,GO:0032814,GO:0032815,GO:0033036,GO:0033365,GO:0033674,GO:0034451,GO:0034613,GO:0036211,GO:0042304,GO:0042325,GO:0042326,GO:0042327,GO:0042509,GO:0042531,GO:0042532,GO:0042976,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043549,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044380,GO:0044421,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044782,GO:0045717,GO:0045833,GO:0045859,GO:0045860,GO:0045922,GO:0045936,GO:0045937,GO:0046425,GO:0046426,GO:0046427,GO:0046890,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050000,GO:0050730,GO:0050731,GO:0050732,GO:0050789,GO:0050790,GO:0050794,GO:0050865,GO:0050866,GO:0051055,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051225,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051250,GO:0051276,GO:0051303,GO:0051310,GO:0051338,GO:0051347,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0060255,GO:0060271,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0070727,GO:0070851,GO:0070925,GO:0071539,GO:0071704,GO:0071840,GO:0072698,GO:0080090,GO:0090307,GO:0098813,GO:0120031,GO:0120036,GO:0140014,GO:1901564,GO:1902531,GO:1902532,GO:1902533,GO:1902850,GO:1903047,GO:1904892,GO:1904893,GO:1904894,GO:1905508,GO:1905515,GO:2001279
EggNOG OGs28J7Y@1,2QRKC@2759
Ec32 ortholog descriptionProgesterone-induced-blocking factor 1
Ec32 orthologEc-12_005140.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Exons6
Model size726
Cds size726
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15481.3832.1prot_E-fasciculatus_F_contig15481.3832.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15481 459..3014 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928024.7946997-CDS-E-fasciculatus_F_contig15481:458..5331622928024.7946997-CDS-E-fasciculatus_F_contig15481:458..533Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15481 459..533 -
1695995793.0311768-CDS-E-fasciculatus_F_contig15481:458..5331695995793.0311768-CDS-E-fasciculatus_F_contig15481:458..533Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15481 459..533 -
1622928024.8083558-CDS-E-fasciculatus_F_contig15481:814..9371622928024.8083558-CDS-E-fasciculatus_F_contig15481:814..937Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15481 815..937 -
1695995793.0540087-CDS-E-fasciculatus_F_contig15481:814..9371695995793.0540087-CDS-E-fasciculatus_F_contig15481:814..937Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15481 815..937 -
1622928024.8180149-CDS-E-fasciculatus_F_contig15481:1477..16331622928024.8180149-CDS-E-fasciculatus_F_contig15481:1477..1633Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15481 1478..1633 -
1695995793.062699-CDS-E-fasciculatus_F_contig15481:1477..16331695995793.062699-CDS-E-fasciculatus_F_contig15481:1477..1633Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15481 1478..1633 -
1622928025.109119-CDS-E-fasciculatus_F_contig15481:2037..20941622928025.109119-CDS-E-fasciculatus_F_contig15481:2037..2094Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15481 2038..2094 -
1695995793.073486-CDS-E-fasciculatus_F_contig15481:2037..20941695995793.073486-CDS-E-fasciculatus_F_contig15481:2037..2094Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15481 2038..2094 -
1622928025.1976862-CDS-E-fasciculatus_F_contig15481:2370..26131622928025.1976862-CDS-E-fasciculatus_F_contig15481:2370..2613Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15481 2371..2613 -
1695995793.0845861-CDS-E-fasciculatus_F_contig15481:2370..26131695995793.0845861-CDS-E-fasciculatus_F_contig15481:2370..2613Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15481 2371..2613 -
1622928025.211606-CDS-E-fasciculatus_F_contig15481:2942..30141622928025.211606-CDS-E-fasciculatus_F_contig15481:2942..3014Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15481 2943..3014 -
1695995793.0955815-CDS-E-fasciculatus_F_contig15481:2942..30141695995793.0955815-CDS-E-fasciculatus_F_contig15481:2942..3014Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15481 2943..3014 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15481.3832.1

>prot_E-fasciculatus_F_contig15481.3832.1 ID=prot_E-fasciculatus_F_contig15481.3832.1|Name=mRNA_E-fasciculatus_F_contig15481.3832.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=242bp
ATTETGELQRREDARARRLATAREEGLKVDLEALRERAEEMSGRAREAQR
AADENSDKARGFDQVEALLRTTRLELDAARALSKSQAAALVDVAESEKAA
ARTAQDASQRSLMLEMDKTYLQRELSEAQNKADRLGRESEAASERLRDLE
RSKDTLAAELVSVRERTRSEHEERLEAEVGRLREQSAKELADIRASGREV
YERENETLREARKDALQDLSRVRSELSELQRAHEDLVITMAK
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mRNA from alignment at E-fasciculatus_F_contig15481:459..3014-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15481.3832.1 ID=mRNA_E-fasciculatus_F_contig15481.3832.1|Name=mRNA_E-fasciculatus_F_contig15481.3832.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2556bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15481:459..3014- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCCACAACGGAAACTGGAGAACTGCAGCGCAGAGAGGATGCTAGGGCCCG
TCGACTCGCCACCGCGCGGGAGGTGAGGAGACAGTCAGAAACAGGAGGCC
CTTTTGTCAGGAACCGCAACCCAATGGCACTTGCGTACAGCAGGTTATGT
GCGTCGTCCCATGTATCGACGCGTCAAATGTACCTACAGTATGACGCTTA
CGCACGAACGTTTTCCGCGCGCAACGTTGTTTGACGAAATCACAAGTGGG
TTCGCGAGGGCATGAAGCTTTGTTGTATTAGTAGGGGTTATGGGTTGCGA
CCCCCCCCCTCTCTATTTCACGTGTAACGCTTCATATTCTCGTAAAGTCC
GAAAATCAATCGTTTGCACCGCACTGTCATTCCTCTCCCTTCCCCCCACA
GGAGGGTCTGAAGGTAGACCTCGAGGCGTTGAGAGAGCGGGCCGAGGAGA
TGAGCGGCAGGGCGAGGGAGGCCCAGCGAGCGGCGGACGAGAACAGCGAC
AAGGCTCGCGGCTTCGACCAAGTCGAGGCCCTCCTTAGGACGACCCGCCT
AGAGCTCGACGCCGCCAGGGCCCTGTCCAAGAGCCAGGCCGCGGCGCTGG
TGGACGTGGCCGAGTCGGAAAAGGCGGCAGCAAGGACGGCTCAGGTATAA
TAACCGTCTTGTCTTGTCTGTGTGTACACCGGATCTCTTGGTTCGTTATT
TGTCATAGGTATATCGCAGAAACGCGACAACGTTCGTTTTGCCGATTTAT
TTGTTTCTTTTCAGGGTATTATTGTGCATGTTGTTGGTGTACCGCTCTTG
TTCGTGTCCGTCCGTCCCACTGTATTGATTGACCATTCCACGAACAAAAT
GGTACAAAAAGAACGCGTTTGCCCCGGCGTTTTTTTTTTGCTGTGTTCTG
TGGCTTGCCGCGTGACACAGGACGCTTCCCAACGCAGCTTGATGTTGGAG
ATGGACAAGACCTACCTTCAACGAGAGGTGAGAAGACAAAACAAAACCAC
GCTATAGCTCGCTCGATACTTTCATTCTTCTCATTTCATCGACGTCATCG
GCCTTTTCTTTCCGTTTGTGGTGGGAAACAAGGTGTAGATTGTTAAATTT
AGGGTATTCAGGGAAACCAGCTAGACGGCTGCCGTACACACGCCGTATAT
TTCGTACGAATCTTTGTCTGGCGGTTGAATGTACCGGGATAACATTAGCA
GAACTGCGCCTACCACGTCTCTGACCTCCAACCCGTCCCGCCCCCTTGCT
GTCGTCCCCGCGATCACAAACAACCAAACACCAACGCCAACATCGACAAC
AACACCACCACCACCACCACCACCACCACCACCACCAACAACAACAACAA
CAACGTCAATCACACCGACAACACACGACAGCTTTCCGAGGCTCAGAACA
AGGCCGACCGGCTAGGGCGAGAGTCCGAAGCGGCGAGCGAGCGCCTCCGG
GACCTGGAGCGTTCGAAGGACACGCTTGCGGCGGAACTGGTGTCGGTTCG
GGAGCGCACGCGATCGGAGCACGAGGAGCGCCTGGAGGTATGCTATGTAA
ATGTACCTGGTGTATACGCATACAACAACAGGGTAAAGATGACAAGTTGT
TCATTGACACAAACAACAATATGGATGAACCTTAACAACAACGCTCTTGT
GGAATGTGCCATATGTGTGATGCGGAGCGATCGGTTCAACAAACACGAGT
GCGATGGTGATTCGTGCTGGCGTATTTACCGCCAGCATCGTCGGCGACAT
CCGCCCATCCCTTCGAACGTTTCTTTTTCGAGAGGGTAGTCTACATTGAT
GTCATGCGTTGGACTCTGTTGATGTCGTCATGTTGTATGTGCATTTCTTG
TAAGCAGAAGTGGCATGGTATCGTCATGTTTCGGGAAATGGTCAAAATTA
GGGAAGCACGTGTGTTTTGATACCCCGGGGGGATGCCGCCTCGAACAACC
CCCCTGGCGTTTATCTTGAAACGACGACAACCACAATCACAACAATAATC
ACAATTACACACGACATCAACCACCACCACCGCCACAACAACAACAACAA
CAACAACAACATCGTCTGTCATCACAGGCGGAGGTTGGCCGTCTTCGGGA
GCAGAGCGCCAAGGAGCTGGCGGACATCCGGGCTAGCGGGAGGGAGGTGT
ACGAGAGGGAGAACGAGACCCTAAGGGAGGCGAGGAAGGACGCGTTGCAG
GTATACGGTAAGGTAGTGGGTAGCTTTGTCGAGCTCATGATCGCTGTCGA
TTGTTGTTGTTGTTGTGTTGTTGTTGTTATTGTTGGTGTTGCTGTTGCTG
TTGTCGTCATCGTCGTTGTTGATGTCACTGTTGATGATATTGTGCCGCTT
TCTTTGCGGCCGTTGTTTTGTCGCTCTCTACCCTGTGCTAATTATTCTCC
TCACCACCCCCCGCTATTTTTTTCGCCTTGTTCGCGCGTTGGGAAATCGC
ACCTGCTTCTGCTGCTCGTGCTATTGCCAAGGACTTGTCTCGCGTGCGAA
GCGAGCTGAGTGAGCTGCAGAGAGCCCACGAAGACCTCGTCATCACGATG
GCCAAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15481:459..3014-

>mRNA_E-fasciculatus_F_contig15481.3832.1 ID=mRNA_E-fasciculatus_F_contig15481.3832.1|Name=mRNA_E-fasciculatus_F_contig15481.3832.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1452bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15481:459..3014- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCCACAACGGAAACTGGAGAACTGCAGCGCAGAGAGGATGCTAGGGCCCG
TCGACTCGCCACCGCGCGGGAGGCCACAACGGAAACTGGAGAACTGCAGC
GCAGAGAGGATGCTAGGGCCCGTCGACTCGCCACCGCGCGGGAGGAGGGT
CTGAAGGTAGACCTCGAGGCGTTGAGAGAGCGGGCCGAGGAGATGAGCGG
CAGGGCGAGGGAGGCCCAGCGAGCGGCGGACGAGAACAGCGACAAGGCTC
GCGGCTTCGACCAAGTCGAGGCCCTCCTTAGGACGACCCGCCTAGAGCTC
GACGCCGCCAGGGCCCTGTCCAAGAGCCAGGCCGCGGCGCTGGTGGACGT
GGCCGAGTCGGAAAAGGCGGCAGCAAGGACGGCTCAGGAGGGTCTGAAGG
TAGACCTCGAGGCGTTGAGAGAGCGGGCCGAGGAGATGAGCGGCAGGGCG
AGGGAGGCCCAGCGAGCGGCGGACGAGAACAGCGACAAGGCTCGCGGCTT
CGACCAAGTCGAGGCCCTCCTTAGGACGACCCGCCTAGAGCTCGACGCCG
CCAGGGCCCTGTCCAAGAGCCAGGCCGCGGCGCTGGTGGACGTGGCCGAG
TCGGAAAAGGCGGCAGCAAGGACGGCTCAGGACGCTTCCCAACGCAGCTT
GATGTTGGAGATGGACAAGACCTACCTTCAACGAGAGGACGCTTCCCAAC
GCAGCTTGATGTTGGAGATGGACAAGACCTACCTTCAACGAGAGCTTTCC
GAGGCTCAGAACAAGGCCGACCGGCTAGGGCGAGAGTCCGAAGCGGCGAG
CGAGCGCCTCCGGGACCTGGAGCGTTCGAAGGACACGCTTGCGGCGGAAC
TGGTGTCGGTTCGGGAGCGCACGCGATCGGAGCACGAGGAGCGCCTGGAG
CTTTCCGAGGCTCAGAACAAGGCCGACCGGCTAGGGCGAGAGTCCGAAGC
GGCGAGCGAGCGCCTCCGGGACCTGGAGCGTTCGAAGGACACGCTTGCGG
CGGAACTGGTGTCGGTTCGGGAGCGCACGCGATCGGAGCACGAGGAGCGC
CTGGAGGCGGAGGTTGGCCGTCTTCGGGAGCAGAGCGCCAAGGAGCTGGC
GGACATCCGGGCTAGCGGGAGGGAGGTGTACGAGAGGGAGAACGAGACCC
TAAGGGAGGCGAGGAAGGACGCGTTGCAGGCGGAGGTTGGCCGTCTTCGG
GAGCAGAGCGCCAAGGAGCTGGCGGACATCCGGGCTAGCGGGAGGGAGGT
GTACGAGAGGGAGAACGAGACCCTAAGGGAGGCGAGGAAGGACGCGTTGC
AGGACTTGTCTCGCGTGCGAAGCGAGCTGAGTGAGCTGCAGAGAGCCCAC
GAAGACCTCGTCATCACGATGGCCAAGGACTTGTCTCGCGTGCGAAGCGA
GCTGAGTGAGCTGCAGAGAGCCCACGAAGACCTCGTCATCACGATGGCCA
AG
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