prot_E-fasciculatus_F_contig15431.3809.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15431.3809.1
Unique Nameprot_E-fasciculatus_F_contig15431.3809.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length240
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15431.3809.1 vs. uniprot
Match: A0A6H5KMB9_9PHAE (DEAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMB9_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 6.740e-41
Identity = 115/130 (88.46%), Postives = 115/130 (88.46%), Query Frame = 0 
Query:  110 GGPIRTLGMMREESARRAQGLGSMYGNHGLGTVKGASFSGGESXXXXXXXXXXXXXXXXXXXXXXXXXXXASGLPSSFLAKGLKGAGGGRDVSLGSSSTTSISSGTPSISTPRARVRSYNENELYGTWFA 239
            GGPIRTLGMMREESARRAQGLGSMYG HG G VKGAS S G  XXXXXXXXXXXXXXXXXXXXXX      SGLPSSFLAKGLKGAGG RDVSLGSSSTTSISSGTPSISTPRARVRS NENELYGTWFA
Sbjct:  311 GGPIRTLGMMREESARRAQGLGSMYGIHGQGAVKGASVSVGAXXXXXXXXXXXXXXXXXXXXXXX------SGLPSSFLAKGLKGAGG-RDVSLGSSSTTSISSGTPSISTPRARVRSCNENELYGTWFA 433
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15431.3809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KMB9_9PHAE6.740e-4188.46DEAD domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15431contigE-fasciculatus_F_contig15431:493..1212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15431.3809.1mRNA_E-fasciculatus_F_contig15431.3809.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15431 493..1212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15431.3809.1 ID=prot_E-fasciculatus_F_contig15431.3809.1|Name=mRNA_E-fasciculatus_F_contig15431.3809.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=240bp
YSEICEGAEVVDDDDGNAENRAPPGAAAAAAAAAAAAATTDRVAGGRDGR
GRGAPAAPAVACVPRPPRIDTDAATSRGTVIVGGVVVAPPPPASAPGGGG
GGGRKAASAGGPIRTLGMMREESARRAQGLGSMYGNHGLGTVKGASFSGG
ESSSSVTNANTTTGGGGGGGGGGGGGGGGASGLPSSFLAKGLKGAGGGRD
VSLGSSSTTSISSGTPSISTPRARVRSYNENELYGTWFA*
back to top