mRNA_E-fasciculatus_F_contig15377.3773.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15377.3773.1 vs. uniprot
Match: D8LCY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY6_ECTSI) HSP 1 Score: 240 bits (613), Expect = 3.880e-71 Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 1
Query: 4 QAQGHRCLIFSQFASMLDILQDLCLARGYEHGRLDQSTSSPQTRLDVRRFNAPESKVSVLLVPTRMAGASGGLNLTAADTVILYDSHWNPQVDLQAIERAHRIGQSNPVKVFRLLCRRSVEERIVA 381
QA+GHRCLI SQFASMLDILQDLCLARGYEHGRLD+STSSPQTRLD RRFNAPESKVSVLLVPTRM GASGGLNLTAADTVILYDSHWNPQVDLQAIER HRIGQS PVKVFRLLCRRSVEERIVA
Sbjct: 1288 QAKGHRCLILSQFASMLDILQDLCLARGYEHGRLDESTSSPQTRLDARRFNAPESKVSVLLVPTRMTGASGGLNLTAADTVILYDSHWNPQVDLQAIERVHRIGQSKPVKVFRLLCRRSVEERIVA 1413
BLAST of mRNA_E-fasciculatus_F_contig15377.3773.1 vs. uniprot
Match: A0A6H5KTV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV3_9PHAE) HSP 1 Score: 239 bits (610), Expect = 9.830e-71 Identity = 119/126 (94.44%), Postives = 122/126 (96.83%), Query Frame = 1
Query: 4 QAQGHRCLIFSQFASMLDILQDLCLARGYEHGRLDQSTSSPQTRLDVRRFNAPESKVSVLLVPTRMAGASGGLNLTAADTVILYDSHWNPQVDLQAIERAHRIGQSNPVKVFRLLCRRSVEERIVA 381
QA+GHRCLI SQFASMLDIL+DLCLARGYEHGRLD+STSS QTRLD RRFNAPESKVSVLLVPTRMAGASGGLNLTAADTVILYDSHWNPQVDLQAIERAHRIGQS PVKVFRLLCRRSVEERIVA
Sbjct: 1305 QAKGHRCLILSQFASMLDILEDLCLARGYEHGRLDESTSSSQTRLDARRFNAPESKVSVLLVPTRMAGASGGLNLTAADTVILYDSHWNPQVDLQAIERAHRIGQSKPVKVFRLLCRRSVEERIVA 1430
BLAST of mRNA_E-fasciculatus_F_contig15377.3773.1 vs. uniprot
Match: A0A836C7V0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7V0_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.610e-45 Identity = 78/126 (61.90%), Postives = 101/126 (80.16%), Query Frame = 1
Query: 4 QAQGHRCLIFSQFASMLDILQDLCLARGYEHGRLDQSTSSPQTRLDVRRFNAPESKVSVLLVPTRMAGASGGLNLTAADTVILYDSHWNPQVDLQAIERAHRIGQSNPVKVFRLLCRRSVEERIVA 381
+A GHR L+F+QF SMLDIL++ C+AR +E+ RLD T+ Q RLD+RRFNAP S + + L+ TR G G+NL +ADTVILYDS WNPQVDLQA+ERAHRIGQ+ PV+V+R++CR SVEER+V+
Sbjct: 328 RADGHRVLLFTQFTSMLDILEEYCIARSHEYARLDGDTNRVQRRLDIRRFNAPASPLFIFLISTRAGGL--GINLASADTVILYDSDWNPQVDLQAMERAHRIGQTKPVRVYRMVCRGSVEERMVS 451
BLAST of mRNA_E-fasciculatus_F_contig15377.3773.1 vs. uniprot
Match: K8Z8U9_NANGC (Swi snf-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 19 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8U9_NANGC) HSP 1 Score: 162 bits (409), Expect = 1.130e-43 Identity = 80/126 (63.49%), Postives = 100/126 (79.37%), Query Frame = 1
Query: 4 QAQGHRCLIFSQFASMLDILQDLCLARGYEHGRLDQSTSSPQTRLDVRRFNAPESKVSVLLVPTRMAGASGGLNLTAADTVILYDSHWNPQVDLQAIERAHRIGQSNPVKVFRLLCRRSVEERIVA 381
+A GHR L+FSQF SMLDIL++ C RG+E+ RLD ST+ Q RLD+RRFNAP S + V L+ TR G G+NL +ADTV+LYDS WNPQVDLQA+ERAHRIGQ+ PV+V+RL+ R SVEER+V+
Sbjct: 662 KADGHRVLLFSQFTSMLDILEEYCQMRGHEYVRLDGSTNRVQRRLDMRRFNAPGSNLFVFLISTRAGGV--GINLASADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVRVYRLVVRASVEERMVS 785
BLAST of mRNA_E-fasciculatus_F_contig15377.3773.1 vs. uniprot
Match: W7TYI9_9STRA (Swi snf matrix actin dependent regulator of subfamily member 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYI9_9STRA) HSP 1 Score: 160 bits (406), Expect = 2.940e-43 Identity = 80/126 (63.49%), Postives = 99/126 (78.57%), Query Frame = 1
Query: 4 QAQGHRCLIFSQFASMLDILQDLCLARGYEHGRLDQSTSSPQTRLDVRRFNAPESKVSVLLVPTRMAGASGGLNLTAADTVILYDSHWNPQVDLQAIERAHRIGQSNPVKVFRLLCRRSVEERIVA 381
+A GHR L+FSQF SMLDIL++ C RG+E+ RLD ST+ Q RLD+RRFNAP S + V L+ TR G G+NL +ADTV+LYDS WNPQVDLQA+ERAHRIGQ PV+V+RL+ R SVEER+V+
Sbjct: 1755 KADGHRVLLFSQFTSMLDILEEYCQMRGHEYVRLDGSTNRVQRRLDMRRFNAPGSNLFVFLISTRAGGV--GINLASADTVVLYDSDWNPQVDLQAMERAHRIGQIKPVRVYRLVVRASVEERMVS 1878
BLAST of mRNA_E-fasciculatus_F_contig15377.3773.1 vs. uniprot
Match: A0A7S3M4L2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4L2_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.540e-42 Identity = 79/123 (64.23%), Postives = 94/123 (76.42%), Query Frame = 1
Query: 13 GHRCLIFSQFASMLDILQDLCLARGYEHGRLDQSTSSPQTRLDVRRFNAPESKVSVLLVPTRMAGASGGLNLTAADTVILYDSHWNPQVDLQAIERAHRIGQSNPVKVFRLLCRRSVEERIVA 381
GHR LIFSQF SMLD+L+D C R Y RLD T+ + RLD RRFNAP S + + L+ TR G GLNL +ADTVILYDS WNPQVDLQA+ERAHRIGQ+ PV+V+RL+CR SVEER+V+
Sbjct: 173 GHRVLIFSQFTSMLDLLEDYCELREYPFVRLDGETNRVKRRLDCRRFNAPRSPLFIFLISTRAGGL--GLNLASADTVILYDSDWNPQVDLQAMERAHRIGQTKPVRVYRLVCRGSVEERMVS 293
BLAST of mRNA_E-fasciculatus_F_contig15377.3773.1 vs. uniprot
Match: A0A7S3UX20_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX20_HETAK) HSP 1 Score: 142 bits (357), Expect = 1.520e-39 Identity = 71/123 (57.72%), Postives = 88/123 (71.54%), Query Frame = 1
Query: 13 GHRCLIFSQFASMLDILQDLCLARGYEHGRLDQSTSSPQTRLDVRRFNAPESKVSVLLVPTRMAGASGGLNLTAADTVILYDSHWNPQVDLQAIERAHRIGQSNPVKVFRLLCRRSVEERIVA 381
GHR L+FSQF SMLDIL+D CL R Y + RLD T+ Q RLD+RR+NAP SK+ + LV TR G G+NL ADTV+L+DS WNP +D QA +RAHRIGQ N V+V RL VEE+I++
Sbjct: 19 GHRVLLFSQFTSMLDILEDYCLYRKYNYCRLDGETNRVQRRLDIRRYNAPGSKLFIFLVSTRAGGL--GVNLATADTVVLFDSDWNPMMDAQAQDRAHRIGQKNEVRVLRLCTNSPVEEKILS 139
BLAST of mRNA_E-fasciculatus_F_contig15377.3773.1 vs. uniprot
Match: A0A2D4L2B7_9SAUR (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Micrurus paraensis TaxID=1970185 RepID=A0A2D4L2B7_9SAUR) HSP 1 Score: 133 bits (335), Expect = 2.210e-36 Identity = 68/123 (55.28%), Postives = 84/123 (68.29%), Query Frame = 1
Query: 10 QGHRCLIFSQFASMLDILQDLCLARGYEHGRLDQSTSSPQTRLDVRRFNAPESKVSVLLVPTRMAGASGGLNLTAADTVILYDSHWNPQVDLQAIERAHRIGQSNPVKVFRLLCRRSVEERIV 378
QG R L+FSQ +LDIL+D C+ RGYE+ RLD T + + FNAP S+ V ++ TR G G+NL AD VILYDS WNPQVDLQA++RAHRIGQ V+VFRL+ +VEERIV
Sbjct: 75 QGSRVLVFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSRKFVFMLSTRAGGL--GINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKAVRVFRLITDNTVEERIV 195
BLAST of mRNA_E-fasciculatus_F_contig15377.3773.1 vs. uniprot
Match: A0A1X0NY53_9TRYP (Transcription activator n=1 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0NY53_9TRYP) HSP 1 Score: 139 bits (351), Expect = 7.270e-36 Identity = 69/126 (54.76%), Postives = 90/126 (71.43%), Query Frame = 1
Query: 1 FQAQGHRCLIFSQFASMLDILQDLCLARGYEHGRLDQSTSSPQTRLDVRRFNAPESKVSVLLVPTRMAGASGGLNLTAADTVILYDSHWNPQVDLQAIERAHRIGQSNPVKVFRLLCRRSVEERIV 378
F+ +GHRCLIFS F S+LD+LQ LC+ RGY RLD ST + L + RFNAP+S + L+ T G G+ LT ADTVIL+DSH+NPQ+D QA +RAHRIGQ+ V+V+RL R ++EERI+
Sbjct: 544 FKEEGHRCLIFSNFTSILDLLQALCVLRGYSFERLDGSTQRVERELSMTRFNAPDSACFLFLLTTTAGGV--GVTLTGADTVILFDSHYNPQIDRQAADRAHRIGQTRVVRVYRLCLRNTMEERIL 667
BLAST of mRNA_E-fasciculatus_F_contig15377.3773.1 vs. uniprot
Match: A0A7S2WMT9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WMT9_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.030e-35 Identity = 68/122 (55.74%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 13 GHRCLIFSQFASMLDILQDLCLARGYEHGRLDQSTSSPQTRLDVRRFNAPESKVSVLLVPTRMAGASGGLNLTAADTVILYDSHWNPQVDLQAIERAHRIGQSNPVKVFRLLCRRSVEERIV 378
GHR +IFSQF + LDILQD C RGY+ RLD ST+ Q +D+ ++N +S L+ TR G G+NL ADTVILYDS WNPQVDLQA++R HRIGQ+ PV V+RL+ + +VEER+V
Sbjct: 1214 GHRVVIFSQFTATLDILQDFCSLRGYKFSRLDGSTNRVQRAIDIMQYNKEDSTYFAYLMSTRAGGL--GINLATADTVILYDSDWNPQVDLQAMDRVHRIGQTKPVHVYRLIAKGTVEERVV 1333 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15377.3773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15377.3773.1 >prot_E-fasciculatus_F_contig15377.3773.1 ID=prot_E-fasciculatus_F_contig15377.3773.1|Name=mRNA_E-fasciculatus_F_contig15377.3773.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=127bp FQAQGHRCLIFSQFASMLDILQDLCLARGYEHGRLDQSTSSPQTRLDVRRback to top mRNA from alignment at E-fasciculatus_F_contig15377:2234..3030- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15377.3773.1 ID=mRNA_E-fasciculatus_F_contig15377.3773.1|Name=mRNA_E-fasciculatus_F_contig15377.3773.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=797bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15377:2234..3030- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15377:2234..3030- >mRNA_E-fasciculatus_F_contig15377.3773.1 ID=mRNA_E-fasciculatus_F_contig15377.3773.1|Name=mRNA_E-fasciculatus_F_contig15377.3773.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=762bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15377:2234..3030- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |