mRNA_E-fasciculatus_F_contig15321.3744.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15321.3744.1
Unique NamemRNA_E-fasciculatus_F_contig15321.3744.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15321.3744.1 vs. uniprot
Match: D7FPG2_ECTSI (Calcium-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPG2_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 1.320e-142
Identity = 252/299 (84.28%), Postives = 257/299 (85.95%), Query Frame = 1 
Query:    4 VVMKNKRHGIECDLWSVGVMTYALVGGRLPFNAEDPGALQHQIKYSQQSYTDETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKAAKEMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFLEMDKTGKGFVTLADFKAAVMELRLSIAQKEQGSKSDLVSGVAAAAAAAGPGEEAGAGGEPKNPEVVAGAAGVAPSNGSAVEGKGADSREDAEETHTAVTPAPXXXXXXXXXXXXXXRPAVVAGAKEGTTREEAVAGDGGVTXXXXXXXEGGAAIAI 900
            +VMKNKRHGIECD+WSVGVMTYALVGGRLPFNAEDP ALQHQIKYSQQSY DETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKA KEMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRF EMDKTG+GFVTLADFKAAVMELRLSIAQKEQG KSDL SGVAAAAAAAG GE+  AGGEP NPEVVA      PSNG  V G G DSREDAEET        XXXXXXXXX     RP V AGA+EG TREEAV GD  VT  XXXXXEGGAAIAI
Sbjct:    1 MVMKNKRHGIECDVWSVGVMTYALVGGRLPFNAEDPAALQHQIKYSQQSYADETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKATKEMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFREMDKTGRGFVTLADFKAAVMELRLSIAQKEQGGKSDLESGVAAAAAAAGLGEKP-AGGEPTNPEVVA------PSNGRPV-GGGTDSREDAEETRAXXXXXXXXXXXXXXXAPDEERP-VAAGAEEGATREEAVVGDAEVTGDXXXXXEGGAAIAI 290
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BLAST of mRNA_E-fasciculatus_F_contig15321.3744.1 vs. uniprot
Match: A0A6H5KUQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ0_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 3.290e-131
Identity = 235/299 (78.60%), Postives = 241/299 (80.60%), Query Frame = 1 
Query:    1 QVVMKNKRHGIECDLWSVGVMTYALVGGRLPFNAEDPGALQHQIKYSQQSYTDETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKAAKEMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFLEMDKTGKGFVTLADFKAAVMELRLSIAQKEQGSKSDLVSGVAAAAAAAGPGEEAGAGGEPKNPEVVAGAAGVAPSNGSAVEGKGADSREDAEETHTAVTPAPXXXXXXXXXXXXXXRPAVVAGAKEGTTREEAVAGDGGVTXXXXXXXEGGAAIA 897
            ++VMKNKRHGIECD+WSVGVM YALVGGRLPFNAEDP ALQHQIKYSQQSY DETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKAAK+MEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRF EMDKTGKGFVTLADFKAAVMELRLSIAQKE G            AAAA PGE+  AGGEP NPEVVA      PSNG  V G G DSREDAEET TAV PA XXXXXX        RP   AGA+EGTTREE V GD  VT       EG AAIA
Sbjct:  219 EMVMKNKRHGIECDVWSVGVMAYALVGGRLPFNAEDPAALQHQIKYSQQSYADETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKAAKQMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFREMDKTGKGFVTLADFKAAVMELRLSIAQKESG-----------VAAAARPGEKP-AGGEPTNPEVVA------PSNGRPV-GGGTDSREDAEETRTAVAPA-XXXXXXAVTAPNEERPGA-AGAEEGTTREETVVGDTEVTGDSGTSGEGAAAIA 496
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BLAST of mRNA_E-fasciculatus_F_contig15321.3744.1 vs. uniprot
Match: D7G562_ECTSI (Protein kinase domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G562_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 2.690e-53
Identity = 93/164 (56.71%), Postives = 121/164 (73.78%), Query Frame = 1 
Query:    7 VMKNKRHGIECDLWSVGVMTYALVGGRLPFNAEDPGALQHQIKYSQQSYTDETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKAAKEMEG-APLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFLEMDKTGKGFVTLADFKAAVME 495
            ++K   H + CDLWS+GVM +ALV G+ P+ ++        IKYS   +  E WKGVS LCRDFI+KCL K PKKR+TA QAQ HPW++KAA+ MEG APLSK+SM+A++ +Q  N F+K+ +ELVAYSYEP+QIKDLEL FL MDK GKG ++L +FK  + E
Sbjct:  270 ILKVDGHNVACDLWSLGVMAFALVSGQFPWYSDSKDVCGQMIKYSPLQFPKEKWKGVSPLCRDFIEKCLVKKPKKRITAAQAQQHPWLQKAARLMEGGAPLSKESMMAMLEYQNGNTFQKIVMELVAYSYEPAQIKDLELDFLRMDKQGKGEISLEEFKDGLQE 433
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BLAST of mRNA_E-fasciculatus_F_contig15321.3744.1 vs. uniprot
Match: A0A835YS30_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS30_9STRA)

HSP 1 Score: 153 bits (386), Expect = 2.370e-38
Identity = 74/173 (42.77%), Postives = 107/173 (61.85%), Query Frame = 1 
Query:    7 VMKNKRHGIECDLWSVGVMTYALVGGRLPFNAEDPGALQHQIKYSQQSYTDETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIR-----------KAAKEMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFLEMDKTGKGFVTLADFKAAVM 492
            ++KN  HG+ CD+WS+GV+ +ALVG   PF   DP  L  +IKY++  +    W GVS LC+DFID+CL K PKKRMTA QAQ HPW+R           KA    +G   ++ +   +  FQ  NLF+KVA+E++AY  +P + + L   F+ +DK G G ++L +FK+ +M
Sbjct:  229 ILKNAGHGLPCDMWSIGVIVFALVGNAFPFFDRDPDILASEIKYARYKFAGPAWDGVSPLCKDFIDRCLVKNPKKRMTAPQAQEHPWLRGGTAWANAIRGKAGGGCDGRMKAR-TRRCMGEFQDNNLFKKVAMEVIAYILDPEETESLAREFIALDKDGDGVLSLPEFKSVIM 400
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BLAST of mRNA_E-fasciculatus_F_contig15321.3744.1 vs. uniprot
Match: A0A6H5KFV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFV6_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.650e-30
Identity = 65/162 (40.12%), Postives = 103/162 (63.58%), Query Frame = 1 
Query:    7 VMKNKRHGIECDLWSVGVMTYALVGGRLPFNAEDPGALQHQIKYSQQSYTDETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKAAKEMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFLEMDKTGKGFVTLADFKAAVM 492
            V++   H   CDLWS+GV+TY L+ G  PF + +   L+ QI YS+ ++ +E WK VS+  +DFI K L K P+KR+TA+QAQ HPW+ KA      A LS   +  L++F+  NL ++VAL +VA + E S++++LE  F + D    G +++ DF++ ++
Sbjct:  215 VLQRAHHPQACDLWSMGVITYCLLAGFPPFRSVNLKGLKEQILYSKVTFEEEPWKNVSSYAKDFIQKLLKKDPQKRLTAQQAQHHPWLTKARSTKNNAKLSPKVVENLMHFKNLNLMKRVALGVVARTLEASEMRNLEQEFHKADIARSGEISIEDFRSVLL 376
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BLAST of mRNA_E-fasciculatus_F_contig15321.3744.1 vs. uniprot
Match: A0A835ZF12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF12_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.300e-27
Identity = 58/148 (39.19%), Postives = 90/148 (60.81%), Query Frame = 1 
Query:   37 CDLWSVGVMTYALVGGRLPFNAEDPGALQHQIKYSQQSYTDETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKAAKEMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFLEMDKTGKGFVTLADFK 480
            CD+WS+GV+ Y L+ G  PF+ E    L+ QI++    + D  W+ ++ L + FI + L + P++RMTA +AQ HPWI   AKE+  APLS +    ++ FQ   L +K+AL+ VA + E  Q+++LE  F + D    G +T+AD K
Sbjct:  635 CDMWSIGVIAYLLLCGYPPFSGETRDKLKWQIRHGTYKFHDSAWRHITPLAKSFITRLLVRNPQERMTAAEAQHHPWISTCAKELADAPLSAEVAANILKFQNAKLLKKLALKTVARAMEDDQVRELEREFAKADSQNAGVITMADLK 782
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BLAST of mRNA_E-fasciculatus_F_contig15321.3744.1 vs. uniprot
Match: D8LG93_ECTSI (Calcium-dependent protein kinase 2 (PfCDPK2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG93_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 2.770e-26
Identity = 58/147 (39.46%), Postives = 91/147 (61.90%), Query Frame = 1 
Query:   37 CDLWSVGVMTYALVGGRLPFNAEDPGALQHQIKYSQQSYTDETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKAAKEMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFLEMDKTGKGFVTLADF 477
            CD+WS+GV+ Y L+ G  PF       L+ QI++    +  E W  +S   ++FI + L + P++RM+A +AQ HPW+       + + LSK ++  LVNF++TN  +K+ALELVA S +  QI++LE  F +MDK G G ++L +F
Sbjct:  262 CDMWSIGVIAYLLLCGYPPFGGSSTAELKEQIQHGTYQFHHEAWSDISGKAKNFIKRLLVRNPQERMSAAEAQHHPWLNNHDPSGKDSKLSKAAVQNLVNFRQTNALKKLALELVARSLDIEQIRNLEKDFAKMDKDGSGTISLEEF 408
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BLAST of mRNA_E-fasciculatus_F_contig15321.3744.1 vs. uniprot
Match: A0A6H5K413_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K413_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.230e-21
Identity = 51/138 (36.96%), Postives = 83/138 (60.14%), Query Frame = 1 
Query:   37 CDLWSVGVMTYALVGGRLPFNAEDPGALQHQIKYSQQSYTDETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKAAKEMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFLEMDKTG 450
            CD+WS+GV+ Y L+ G  PF       L+ QI++    +  + W  +S   ++FI + L + P++RM+A +AQ HPW+       + + LSK ++  LVNF++TN  +K+ALELVA S +  QI+ LE  F ++ + G
Sbjct:  208 CDMWSIGVIAYLLLCGYPPFGGTSTAELKDQIQHGTYQFHHDAWSDISGKAKNFIKRLLVRNPQERMSAAEAQHHPWLNDHDPSGKDSKLSKAAVHNLVNFRQTNALKKLALELVARSLDVEQIRKLEKDFAKVKRIG 345
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BLAST of mRNA_E-fasciculatus_F_contig15321.3744.1 vs. uniprot
Match: A0A7S1XPH9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPH9_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.780e-21
Identity = 56/149 (37.58%), Postives = 87/149 (58.39%), Query Frame = 1 
Query:   34 ECDLWSVGVMTYALVGGRLPFNAEDPGALQHQIKYSQQSYTDETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKAAKEMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFLEMDKTGKGFVTLADFK 480
            ECD+WS+GV+ Y LV GR PF   D       +K  + S+    +  +S   +DFI + L   P  RMTA+QAQ HPW+ +   E E  PL  + +  L +FQ+ + F+K+A E++A++ +P+QI DL   F + D  G G ++LA+ +
Sbjct:   12 ECDMWSIGVIAYMLVSGRPPFMGNDERDTLALVKRGRYSFPPYIFDHISDNAKDFIRQLLVLDPAARMTAEQAQKHPWLHEWDHEPE--PLKLEVVDNLKHFQELSAFQKLAHEVIAFTLQPAQIGDLRSEFHKFDVEGTGEISLAEMR 158
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BLAST of mRNA_E-fasciculatus_F_contig15321.3744.1 vs. uniprot
Match: W7T4K4_9STRA (Calcium-dependent protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4K4_9STRA)

HSP 1 Score: 102 bits (255), Expect = 8.110e-21
Identity = 56/152 (36.84%), Postives = 86/152 (56.58%), Query Frame = 1 
Query:   34 ECDLWSVGVMTYALVGGRLPFNAEDPGALQHQIKYSQQSYTDETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKAAKEMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFLEMDKTGKGFVTLADFKAAV 489
            ECD+WS+GV+ Y L+ GR PF  +       +++  + S+    +  VSA  +DFI + L     +RMTA+QAQ HPW+    +  E  PL  D + +L NF + +  +KVA+E+VA+S    QIKDL   F ++D    G +TL +   A+
Sbjct:  233 ECDMWSIGVIAYMLLSGRPPFYGDTDNETLIRVRAGKFSFPPSAFHQVSAQAKDFISRLLVVDHTRRMTARQAQAHPWLHSWDQSPE--PLHVDILGSLRNFHEFSTLKKVAMEVVAFSLRSEQIKDLRREFEKVDLDSNGEITLEELSQAL 382
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15321.3744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPG2_ECTSI1.320e-14284.28Calcium-dependent protein kinase n=1 Tax=Ectocarpu... [more]
A0A6H5KUQ0_9PHAE3.290e-13178.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G562_ECTSI2.690e-5356.71Protein kinase domain containing protein n=1 Tax=E... [more]
A0A835YS30_9STRA2.370e-3842.77Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6H5KFV6_9PHAE2.650e-3040.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZF12_9STRA1.300e-2739.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LG93_ECTSI2.770e-2639.46Calcium-dependent protein kinase 2 (PfCDPK2) n=1 T... [more]
A0A6H5K413_9PHAE1.230e-2136.96Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S1XPH9_9STRA1.780e-2137.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7T4K4_9STRA8.110e-2136.84Calcium-dependent protein n=3 Tax=Monodopsidaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15321contigE-fasciculatus_F_contig15321:1..3014 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score120.6
Seed ortholog evalue1.3e-24
Seed eggNOG ortholog2880.D8LG93
KEGG koko:K13412
KEGG Pathwayko04626,ko05145,map04626,map05145
GOsGO:0000165,GO:0000187,GO:0001817,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002224,GO:0002237,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006082,GO:0006464,GO:0006468,GO:0006690,GO:0006691,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009931,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010646,GO:0010647,GO:0010857,GO:0015630,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032496,GO:0032675,GO:0032680,GO:0033554,GO:0033674,GO:0033993,GO:0034097,GO:0035556,GO:0035924,GO:0036211,GO:0042221,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043487,GO:0043488,GO:0043489,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044351,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0045859,GO:0045860,GO:0045934,GO:0045937,GO:0046777,GO:0048010,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051019,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051338,GO:0051347,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0061013,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070848,GO:0070887,GO:0070935,GO:0071310,GO:0071363,GO:0071704,GO:0071900,GO:0071902,GO:0080090,GO:0080134,GO:0080135,GO:0098657,GO:0140096,GO:1900034,GO:1901564,GO:1901568,GO:1901700,GO:1902369,GO:1902373,GO:1902531,GO:1902533,GO:1903311,GO:1903312,GO:1903555
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Exons5
Model size900
Cds size891
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15321.3744.1prot_E-fasciculatus_F_contig15321.3744.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15321 1..3005 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928011.077738-CDS-E-fasciculatus_F_contig15321:0..4651622928011.077738-CDS-E-fasciculatus_F_contig15321:0..465Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15321 1..465 -
1695995787.8218532-CDS-E-fasciculatus_F_contig15321:0..4651695995787.8218532-CDS-E-fasciculatus_F_contig15321:0..465Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15321 1..465 -
1622928011.0890608-CDS-E-fasciculatus_F_contig15321:1261..13341622928011.0890608-CDS-E-fasciculatus_F_contig15321:1261..1334Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15321 1262..1334 -
1695995787.832706-CDS-E-fasciculatus_F_contig15321:1261..13341695995787.832706-CDS-E-fasciculatus_F_contig15321:1261..1334Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15321 1262..1334 -
1622928011.103734-CDS-E-fasciculatus_F_contig15321:1637..18371622928011.103734-CDS-E-fasciculatus_F_contig15321:1637..1837Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15321 1638..1837 -
1695995787.8412344-CDS-E-fasciculatus_F_contig15321:1637..18371695995787.8412344-CDS-E-fasciculatus_F_contig15321:1637..1837Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15321 1638..1837 -
1622928011.1197348-CDS-E-fasciculatus_F_contig15321:2308..24231622928011.1197348-CDS-E-fasciculatus_F_contig15321:2308..2423Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15321 2309..2423 -
1695995787.8496783-CDS-E-fasciculatus_F_contig15321:2308..24231695995787.8496783-CDS-E-fasciculatus_F_contig15321:2308..2423Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15321 2309..2423 -
1622928011.1329708-CDS-E-fasciculatus_F_contig15321:2967..30051622928011.1329708-CDS-E-fasciculatus_F_contig15321:2967..3005Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15321 2968..3005 -
1695995787.8579319-CDS-E-fasciculatus_F_contig15321:2967..30051695995787.8579319-CDS-E-fasciculatus_F_contig15321:2967..3005Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15321 2968..3005 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928011.1487541-UTR-E-fasciculatus_F_contig15321:3005..30141622928011.1487541-UTR-E-fasciculatus_F_contig15321:3005..3014Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15321 3006..3014 -
1695995787.8661013-UTR-E-fasciculatus_F_contig15321:3005..30141695995787.8661013-UTR-E-fasciculatus_F_contig15321:3005..3014Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15321 3006..3014 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15321.3744.1

>prot_E-fasciculatus_F_contig15321.3744.1 ID=prot_E-fasciculatus_F_contig15321.3744.1|Name=mRNA_E-fasciculatus_F_contig15321.3744.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=297bp
MKNKRHGIECDLWSVGVMTYALVGGRLPFNAEDPGALQHQIKYSQQSYTD
ETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKAAKEMEGAPLS
KDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFLEMDKTGKGF
VTLADFKAAVMELRLSIAQKEQGSKSDLVSGVAAAAAAAGPGEEAGAGGE
PKNPEVVAGAAGVAPSNGSAVEGKGADSREDAEETHTAVTPAPPPPPPAV
VAAPDEERPAVVAGAKEGTTREEAVAGDGGVTGDSGTGGEGGAAIAI
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mRNA from alignment at E-fasciculatus_F_contig15321:1..3014-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15321.3744.1 ID=mRNA_E-fasciculatus_F_contig15321.3744.1|Name=mRNA_E-fasciculatus_F_contig15321.3744.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3014bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15321:1..3014- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGGTGGTCATGAAGAACAAGCGGCACGGGATCGAGTGCGACTTGTGGTG
AGATGCATGGTTTGGGTTCGGTCGTGGGGATGTATGCCCAAGCCCTTTGA
TTTTTTTTATGCCCTTGCTGTGTTCTTTCGGTTTTTGTTTCTCCAGTAAA
AGACGCGCATCGACACGGCCTGCTGATCACGATTGTTCTCCAGGGTCGGC
GTGGAAGAGGCTTGGCAAACACGCACAAACACCGTATGACAACTTTGGGG
CAAACCTAAAGGTCGATCTTGTTTCTTAGTCAGAGTAGACGTCCTGCCTA
CGGCGCTGGGAAGAGCTCCACTCCTGTAGTTTCAAGCCCCGCTGTGTCTC
CCGCAACACCCTCCAGAGTTGAGCCTGTGATTAACCCCCCGGTAGTGGTT
GTTGGACCCACCCACCGGTCGCGGCTGTGGCAGTCAGCGGCTGGGCGTCA
GGCCTTGCCCCGTGCAGCAAGCATGGTTGTTTTTTGCCGGAGCACAAGAC
CAAGGCACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACCAACAATACAATGTACGATACCATACCACATGCAGGTCTGTGGG
TGTCATGACGTACGCCCTGGTAGGCGGGCGGCTTCCCTTCAACGCGGAGG
ACCCCGGGGCCCTTCAGCACCAGATCAAGTACTCGCAACAGTCCTACACA
GATGAGGTGCGCTGTTGTTGTGGACATGACATGCGTGTTTCGGTCGGTAC
GGGTTGAGGGTTGTCCGTCCGTTTGGGTTGTTTCGTAGGAGTTCGAAGCG
GAGCAGGCTTTCTTGCGGGAACCAGCAGATCACTGGTGCGACTTTTGTAT
GATGTAAAACGGGTGGTGATTGCATGTATTTTTCCTAGGAAAACACACAG
TCTACCTGTGATTGCATGTATTTTTCCTAGGAAAACACACACACAACGCC
GATGATACCAAAGCTATCGCCACCCCCCGAACACTGGTGTGACCTGTTAT
GGTGTTTTCTCGAACGGATATTGTAGTACTTCCGTGGTTGTATGAGTGTT
TTCTAAACAAACACACACAACGCCGATATGTACCCCAGTCTCTCTTGTAA
TTGTTATGCGCTTGTTCTGAACAACAAAACACACGCAACGCCAATACCAG
CACCAACGGATGAAAAAATGACGGCAGACGTGGAAAGGCGTGTCGGCGCT
GTGCCGAGACTTCATCGACAAGTGCCTGCACAAGCTCCCGAAGAAGAGGA
TGACGGCCAAGCAAGCACAGCTGCACCCGTGGATCAGGAAGGCCGCCAAG
GAGATGGAGGGGGCACCGTTGAGCAAGGACTCCATGCTCGCCTTGGTCAA
CTTTCAAAAAACAAACCTATTCGAGAAGTGAGTACGGGAGGGCGGAGGGT
CGTTGGTTTCTTCGCTTCGGCCTTTAGTGGTTGGATGATTGTTTGCCGCG
CAAAACCTTTCTCTGTTGTGAAACGGAGCGGATTTTTTTTTTATTCCGTG
CGCGTTATGCCGACGAGGTGTTGCCAGCCAGCTCGCATGCGAGATGAATG
TGTCCGACCTATTGAAGCAGTGAGTGCCCTTGCTCTTGAGCCTCCACTCA
TTATCTCTCCGTGTTTGTTCAAGCTTTTGCCTGCCTGCCTGCCTGCCTGC
CTGCCTCTATGCCTGCCTGCTGCCTGCCAGGGTGGCTCTTGAGCTGGTCG
CGTACTCGTACGAGCCGTCTCAGATAAAGGATTTGGAGTTGCGTTTCCTA
GAGGTGAGAGACTGTACCATGGAATGTCTACTGTATCATGGAATGGCTGC
TGTATCATGGAACGGCTGCTGTGTCATGGAATGGAGCTGTACCATGGAAT
GGAGCTGTCCTCCACCCCCCATCTCGCGCTCGACACCCAAGTTCTCCTTT
CGATGCTGACGCCAAGTTACATACGTGTGTACGCTGGGAAGACTGTAGGC
GGGATGTTGCTTTATGGTAGTGATCATGTCCAGAGCTCTAAGTTTGTAGA
ACGAATCCAATGGGATTTTAGCACGGGCTGCTTCTGTGGTACATATGATT
GGTGCATGGAAAATCGGGATCACGAAGGGCGGGAGTTGGAAAATTAAAGT
CCCCACTTGCAAAGACGACAAACAGGTACGTACCTCGGATTCTGGTAACG
AGGCGACGCAGGGGCGAAGAGCCAAAACACATGGGAACGAGAGCGGGAAA
ACCTAACCGCTGGTAACGAAATCACCATCACAACAACAAGCACCGCCGTG
TGATTGATTGTGATGACGCGCAACGATGATTAGATCGTGTCACAGAGGCC
ACGCCTCGCCTCCCTCCCGGCTCTCGGTGCTCGTACCTCCCTCACTCACT
CTTCCCTCTTGCGGCCTCTCCCCCCCGTCGCCCTTGGCGCGTTGCGACGG
AACCAAACGCTGCGCCCGGGCGGGCGGGCGGACGGGCGGCCATCGGTGAC
GACGATGATAATGATAACGGTGGTGGTGGCGTTCGTGACCGGCGCGGGGG
CGGGGGGGGGTTGTGATACGCCGGCGGTCTGTTCTCGTCACCGTCGAAGA
TGGACAAGACGGGCAAGGGATTTGTGACGCTGGCAGACTTCAAGGCCGCG
GTGATGGAGCTGAGGCTTTCCATCGCCCAGAAAGAGCAGGGGAGCAAGAG
CGACTTAGTATCGGGCGTTGCAGCAGCAGCAGCAGCAGCAGGGCCAGGCG
AGGAGGCCGGGGCGGGAGGAGAGCCGAAGAACCCGGAGGTAGTAGCGGGG
GCGGCGGGTGTGGCGCCAAGTAACGGCAGCGCGGTGGAGGGGAAGGGAGC
GGATAGTCGAGAAGATGCAGAAGAAACACATACAGCCGTGACACCAGCGC
CTCCTCCTCCTCCTCCGGCTGTTGTCGCCGCTCCCGACGAAGAGCGGCCG
GCGGTAGTGGCAGGGGCAAAAGAGGGGACGACAAGAGAGGAGGCGGTTGC
TGGAGACGGGGGGGTGACGGGTGATAGTGGCACCGGTGGTGAGGGGGGAG
CGGCGATAGCGATA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15321:1..3014-

>mRNA_E-fasciculatus_F_contig15321.3744.1 ID=mRNA_E-fasciculatus_F_contig15321.3744.1|Name=mRNA_E-fasciculatus_F_contig15321.3744.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1782bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15321:1..3014- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAGAACAAGCGGCACGGGATCGAGTGCGACTTGTGATGAAGAACAAG
CGGCACGGGATCGAGTGCGACTTGTGGTCTGTGGGTGTCATGACGTACGC
CCTGGTAGGCGGGCGGCTTCCCTTCAACGCGGAGGACCCCGGGGCCCTTC
AGCACCAGATCAAGTACTCGCAACAGTCCTACACAGATGAGGTCTGTGGG
TGTCATGACGTACGCCCTGGTAGGCGGGCGGCTTCCCTTCAACGCGGAGG
ACCCCGGGGCCCTTCAGCACCAGATCAAGTACTCGCAACAGTCCTACACA
GATGAGACGTGGAAAGGCGTGTCGGCGCTGTGCCGAGACTTCATCGACAA
GTGCCTGCACAAGCTCCCGAAGAAGAGGATGACGGCCAAGCAAGCACAGC
TGCACCCGTGGATCAGGAAGGCCGCCAAGGAGATGGAGGGGGCACCGTTG
AGCAAGGACTCCATGCTCGCCTTGGTCAACTTTCAAAAAACAAACCTATT
CGAGAAACGTGGAAAGGCGTGTCGGCGCTGTGCCGAGACTTCATCGACAA
GTGCCTGCACAAGCTCCCGAAGAAGAGGATGACGGCCAAGCAAGCACAGC
TGCACCCGTGGATCAGGAAGGCCGCCAAGGAGATGGAGGGGGCACCGTTG
AGCAAGGACTCCATGCTCGCCTTGGTCAACTTTCAAAAAACAAACCTATT
CGAGAAGGTGGCTCTTGAGCTGGTCGCGTACTCGTACGAGCCGTCTCAGA
TAAAGGATTTGGAGTTGCGTTTCCTAGAGGGTGGCTCTTGAGCTGGTCGC
GTACTCGTACGAGCCGTCTCAGATAAAGGATTTGGAGTTGCGTTTCCTAG
AGATGGACAAGACGGGCAAGGGATTTGTGACGCTGGCAGACTTCAAGGCC
GCGGTGATGGAGCTGAGGCTTTCCATCGCCCAGAAAGAGCAGGGGAGCAA
GAGCGACTTAGTATCGGGCGTTGCAGCAGCAGCAGCAGCAGCAGGGCCAG
GCGAGGAGGCCGGGGCGGGAGGAGAGCCGAAGAACCCGGAGGTAGTAGCG
GGGGCGGCGGGTGTGGCGCCAAGTAACGGCAGCGCGGTGGAGGGGAAGGG
AGCGGATAGTCGAGAAGATGCAGAAGAAACACATACAGCCGTGACACCAG
CGCCTCCTCCTCCTCCTCCGGCTGTTGTCGCCGCTCCCGACGAAGAGCGG
CCGGCGGTAGTGGCAGGGGCAAAAGAGGGGACGACAAGAGAGGAGGCGGT
TGCTGGAGACGGGGGGGTGACGGGTGATAGTGGCACCGGTGGTGAGGGGG
GAGCGGCGATAGCGATAATGGACAAGACGGGCAAGGGATTTGTGACGCTG
GCAGACTTCAAGGCCGCGGTGATGGAGCTGAGGCTTTCCATCGCCCAGAA
AGAGCAGGGGAGCAAGAGCGACTTAGTATCGGGCGTTGCAGCAGCAGCAG
CAGCAGCAGGGCCAGGCGAGGAGGCCGGGGCGGGAGGAGAGCCGAAGAAC
CCGGAGGTAGTAGCGGGGGCGGCGGGTGTGGCGCCAAGTAACGGCAGCGC
GGTGGAGGGGAAGGGAGCGGATAGTCGAGAAGATGCAGAAGAAACACATA
CAGCCGTGACACCAGCGCCTCCTCCTCCTCCTCCGGCTGTTGTCGCCGCT
CCCGACGAAGAGCGGCCGGCGGTAGTGGCAGGGGCAAAAGAGGGGACGAC
AAGAGAGGAGGCGGTTGCTGGAGACGGGGGGGTGACGGGTGATAGTGGCA
CCGGTGGTGAGGGGGGAGCGGCGATAGCGATA
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