mRNA_E-fasciculatus_F_contig15274.3719.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15274.3719.1
Unique NamemRNA_E-fasciculatus_F_contig15274.3719.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig15274.3719.1 vs. uniprot
Match: D8LSE8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSE8_ECTSI)

HSP 1 Score: 483 bits (1242), Expect = 8.740e-156
Identity = 257/327 (78.59%), Postives = 261/327 (79.82%), Query Frame = 1
Query:    1 VGKMLIYGAVLGCLSPLLSIAAGLSCRSPFLTSGDPEKREAIDAAKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGGDRARKAFCAENGISFERMRELGEVRKQLAQALAGIGFISSSRAAFDPRASVNAQARSWRAVKAAVCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQFFTRSRGPDSGPGKDDRVFIHPSSINFKTNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALLLFGGQVAVQAGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQDPRLDVAGSKLSEALVELLQTDGMG 981
            VGKMLIYGAVLGCLSPLLSIAAGLSCRSPFL+SGDPEKREAIDAAKKR                                       GG R+     A                     ALAGIGFI+SSRAAFDPRASVNAQARSWRAVKAAVCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQFFTRSRGPDSGPGKDDRVFIHPSSINF+TNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALLLFGGQVAVQAGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQDPRLDVAGSKLSEALVELLQTDGMG
Sbjct: 1244 VGKMLIYGAVLGCLSPLLSIAAGLSCRSPFLSSGDPEKREAIDAAKKRMAAA-----------------------------------GGGRSNHTLLA---------------------ALAGIGFIASSRAAFDPRASVNAQARSWRAVKAAVCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQFFTRSRGPDSGPGKDDRVFIHPSSINFRTNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALLLFGGQVAVQAGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQDPRLDVAGSKLSEALVELLQTDGMG 1514          
BLAST of mRNA_E-fasciculatus_F_contig15274.3719.1 vs. uniprot
Match: A0A0P1AT97_PLAHL (Atp-dependent rna n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AT97_PLAHL)

HSP 1 Score: 204 bits (520), Expect = 1.860e-55
Identity = 119/327 (36.39%), Postives = 179/327 (54.74%), Query Frame = 1
Query:    1 VGKMLIYGAVLGCLSPLLSIAAGLSCRSPFLTS-GDPEKREAIDAAKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGGDRARKAFCAENGISFERMRELGEVRKQLAQALAGIGFISSSRAAFDPRASVNAQARSWRAVKAAVCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQFFTRSRGPDSGPGKDDRVFIHPSSINFKTNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALLLFGGQVAVQAGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQDPRLDVAGSKLSEALVELLQTDGM 978
            +GK L+YG++L C+ P+  IA+ +S R+PF+ S  DP+ R   +A KK                                         G + ++ FC E G+S++ M  + E++ Q  Q L  IGF  SSRA        NA A + R +KAA+CAGLY  V++V  P +K+      G V   H AK+ +++ RS    +   + +RVF+HPSS NF  N++  PWL+Y E V TS++FVR+CT V+ YALLLFGG + V      + +D W+ F AV RI  L+ ++RQ LD +L +KI +P +++A S+L  A+  LL ++GM
Sbjct: 1123 IGKFLVYGSILRCVEPVAIIASCISSRNPFVMSTSDPQIRVNQNALKKELGGSWKSDHLLLWKLVERYAPLR-----------------GQKMKRDFCREAGLSYDTMESIVELKHQYLQQLDNIGFYESSRAVL-----YNANANAPRMIKAALCAGLYANVVQVVYPEQKYFQAAH-GVVEEDHNAKQIRYYVRSV---TEANQRERVFLHPSSCNFSQNNYDSPWLLYTELVQTSKIFVRECTMVNTYALLLFGGHLEVTHEKNLLTLDGWIHFNAVARIGVLIKKIRQHLDRLLLDKIANPSIEIAQSELVTAISHLLTSEGM 1423          
BLAST of mRNA_E-fasciculatus_F_contig15274.3719.1 vs. uniprot
Match: A0A7S2WS92_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WS92_9STRA)

HSP 1 Score: 204 bits (518), Expect = 3.440e-55
Identity = 122/337 (36.20%), Postives = 182/337 (54.01%), Query Frame = 1
Query:    1 VGKMLIYGAVLGCLSPLLSIAAGLSCRSPFLTSGDPEKREAIDAAKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGGDRARKAFCAENGISFERMRELGEVRKQLAQALAGIGFISSSRAAFDPRASVNAQARSWRAVKAAVCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQFFTRSRGPDSG----------PGKDD--RVFIHPSSINFKTNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALLLFGGQVAVQAGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQDPRLDVAGSKLSEALVELLQTDG 975
            +GKMLIYG++L C   +LSIAA LS R+ F++  D  KR   + AKKR                                         +R R++F  E  +S++ + E+ ++++ LA+ L  IGF + S A             S   VKAA+CAGLYP V+ VR+P +KF + VG G+V +   A++ +       PD            P K+D  RVF+HP+SINF   ++ CPWLVY E+V TS+V++RDCT V+PY++L+FGG++ VQ   G + +D W+   A  R+  LV  LR+ LD +L +KI+DP LDVA + + + + +LL   G
Sbjct: 1089 IGKMLIYGSLLSCADQVLSIAAALSTRNFFMSPQD--KRNEANEAKKRLLGGEGVEVTQSDHICLLYAFEKWNACKS------------ERDRRSFADEFFLSYQSLCEVRDLKRDLARTLEDIGFDARSSAKRAKAGESILSRESVALVKAALCAGLYPNVINVRKPNQKFAETVG-GSVAMAPDAQQLRMMIPRTEPDESEPVINPKTGKPYKNDLERVFVHPASINFSQREYPCPWLVYREKVKTSKVYIRDCTVVNPYSILMFGGEIKVQHEQGTLTIDGWITLRAQARVGVLVRELRKLLDQLLEKKIEDPSLDVANTDVLQGIKKLLVGSG 1410          
BLAST of mRNA_E-fasciculatus_F_contig15274.3719.1 vs. uniprot
Match: A0A176W7Y6_MARPO (RNA helicase n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W7Y6_MARPO)

HSP 1 Score: 203 bits (517), Expect = 4.760e-55
Identity = 125/327 (38.23%), Postives = 174/327 (53.21%), Query Frame = 1
Query:    1 VGKMLIYGAVLGCLSPLLSIAAGLSCRSPFLTSGDPEKREAIDAAKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGGDRARKAFCAENGISFERMRELGEVRKQLAQALAGIGFISSSRAAFDPRASVNAQARSW--RAVKAAVCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQFFTRSRGPDSGPGKDDRVFIHPSSINFKTNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALLLFGGQVAVQAGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQDPRLDVAGSKLSEALVELLQTDG 975
            VGKML++G +L CL P+L+IAA LS RSPF+    P+KRE   AAK R                                        G  +   FCA + +S E +  +   R+   + L  IGF+SS  A   P A     + S   R VKA +CAG YP ++RV  P + FV   G G V     A+E +FFT++ G         RVF+HP+S+NF    +  PWLV+ E+V TS+VF+++ T V  Y LLLFGG+V V+     I+VD+W+ FEA  RIA L+  LR ++D +L++KI+ P LD+  S +  AL+ LL TDG
Sbjct: 1240 VGKMLLFGCMLKCLDPVLTIAAALSGRSPFMAP--PDKREEAAAAKLRLAGGSKSDHLTVVAAYNGWLGARQE---------------GRGSESNFCAAHFLSRETLAGIEASRQDFVKILTDIGFLSSGLAGNHPVAGGPLDSNSGVVRVVKAVICAGFYPNIVRVHHPEKTFVQTEG-GTVERTAAARELRFFTKADG---------RVFLHPASVNFHVGAFESPWLVFSEKVRTSKVFLKESTMVPAYGLLLFGGRVQVKHEKQAISVDDWLEFEAPARIAVLIKELRTKVDSLLFDKIKKPALDIGSSPVVSALIRLLTTDG 1539          
BLAST of mRNA_E-fasciculatus_F_contig15274.3719.1 vs. uniprot
Match: A0A6A7G6M6_9CRUS (mRNA splicing factor ATP-dependent RNA helicase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G6M6_9CRUS)

HSP 1 Score: 192 bits (488), Expect = 7.200e-55
Identity = 108/326 (33.13%), Postives = 175/326 (53.68%), Query Frame = 1
Query:    1 VGKMLIYGAVLGCLSPLLSIAAGLSCRSPFLTSGDPEKREAIDAAKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGGDRARKAFCAENGISFERMRELGEVRKQLAQALAGIGFISSSRAAFDPRASVNAQARSWRAVKAAVCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQFFTRSRGPDSGPGKDDRVFIHPSSINFKTNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALLLFGGQVAVQAGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQDPRLDVAGSKLSEALVELLQTDGM 978
            + K+L+YGA+  CL+P L I A LS R  F +  D  +R+  ++AK +                                        G+R  + FC EN +S+  +  +  ++KQ    L   GF+       DP  ++ + +   + ++A +CAGLYP V+ V  P  ++VD+   G +   H +++ +FF +  G         R+F+HPSS+NF    +S PWLVY +++ + +V+V D T VSPYALLLFGG++++   L  I VDEW+RFEA G+IA  V  LR+ LD +L +KI++P +D+  S + E ++ L++TDG+
Sbjct:   79 ISKLLLYGAIFNCLTPTLIICAILSARPIFYSPVD--RRDEANSAKLKLALSTSDLLTAFNAFRQWERLRKRS---------------GNRMAREFCDENFLSWNILENVAGLKKQFRGHLMNAGFVDLD----DPGQALESNSDDLKVLQAVICAGLYPNVLSVVHPETEYVDM-SHGTIAKEHKSRKIKFFPKRPG--------GRIFLHPSSVNFSCTSFSSPWLVYLQKMESHKVYVYDTTMVSPYALLLFGGKISIDHNLQHIIVDEWIRFEAPGKIAVYVRELRECLDKLLLQKIRNPEIDIGESTVVEGILRLIKTDGL 374          
BLAST of mRNA_E-fasciculatus_F_contig15274.3719.1 vs. uniprot
Match: A0A024U513_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U513_9STRA)

HSP 1 Score: 202 bits (515), Expect = 8.490e-55
Identity = 117/325 (36.00%), Postives = 178/325 (54.77%), Query Frame = 1
Query:    4 GKMLIYGAVLGCLSPLLSIAAGLSCRSPFLTSGDPEKREAIDAAKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGGDRARKAFCAENGISFERMRELGEVRKQLAQALAGIGFISSSRAAFDPRASVNAQARSWRAVKAAVCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQFFTRSRGPDSGPGKDDRVFIHPSSINFKTNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALLLFGGQVAVQAGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQDPRLDVAGSKLSEALVELLQTDGM 978
            GK++++G +L C+ P+++IAA LS +SPF++S  P+ R   DA K++                                            R+A+C +N +S+E M  + E+R+Q  +    +GF   + AA       N  + + + +KAA+ AGLY  V++V  P +K+ +    G +   H AK  QFF R           +RVF+HP+S+NF    +  PWLVY+E V TS++FVR+CT V+PYALLLFGGQ+ VQ   G + VD W++F AV RI  LV  LR +LD +L  K+ +P LD++ S L +A+ +LL T+GM
Sbjct: 1029 GKVVVFGCILRCIDPIVTIAAALSSKSPFVSS--PDDRSKGDALKRQWSEQVPTSDQFLLWNVVKAFSSLSK-----------------NVRRAYCKDNCLSYETMMTILELRQQYLEHCQVLGFYDPANAA-----PFNQHSTNPKVIKAALTAGLYGNVLQVVYPEQKYYESAN-GVLAAAHDAKAIQFFIRKLDKTK-----ERVFLHPTSLNFTRTQFESPWLVYNELVQTSKIFVRECTMVAPYALLLFGGQLTVQHEKGLLLVDNWIKFHAVARIGVLVKALRHQLDHLLAVKVTNPTLDLSSSHLIDAICDLLITEGM 1323          
BLAST of mRNA_E-fasciculatus_F_contig15274.3719.1 vs. uniprot
Match: A0A067CVF3_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CVF3_SAPPC)

HSP 1 Score: 202 bits (515), Expect = 8.530e-55
Identity = 119/324 (36.73%), Postives = 174/324 (53.70%), Query Frame = 1
Query:    7 KMLIYGAVLGCLSPLLSIAAGLSCRSPFLTSGDPEKREAIDAAKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGGDRARKAFCAENGISFERMRELGEVRKQLAQALAGIGFISSSRAAFDPRASVNAQARSWRAVKAAVCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQFFTRSRGPDSGPGKDDRVFIHPSSINFKTNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALLLFGGQVAVQAGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQDPRLDVAGSKLSEALVELLQTDGM 978
            K++++G +L C+ P+++IAA L C+SPF+T+ D  K+   D  K+                                           R+R+ +C +  +S+E +  + E+RKQ  + L  IGF  +S      R  +N  A + + VKAA+ AGLY  V+ V  P +K+ +    G +   H AKE +F  R+   +      +RVF+HPSSINF    +  PWL+Y + V TSR+FVR  T V+PYALLLFGG + VQ   G I VD+W+RF AV RI  LV  LR  LD  L +KI+DP LD++ S L +A+  LL T+G+
Sbjct: 1051 KVVVFGCILRCIDPIVTIAAALECKSPFVTTADDRKK--ADDVKRALSAEIPTSDHMLLWSVVKTFLGLEK-----------------RSRRQYCKDKSLSYETLDSIVELRKQYLEHLQAIGFYDASN-----RDRLNEHAANGKVVKAALTAGLYGNVVSVIYPEQKYYESAH-GVLAATHNAKELRFVIRTLAKEH-----ERVFLHPSSINFTLGQFESPWLMYTDLVQTSRLFVRQSTMVAPYALLLFGGALHVQHEKGLIVVDDWIRFNAVARIGVLVKSLRLHLDRFLTKKIEDPSLDISKSSLVDAICHLLITEGL 1344          
BLAST of mRNA_E-fasciculatus_F_contig15274.3719.1 vs. uniprot
Match: A0A7S1TRZ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRZ9_9STRA)

HSP 1 Score: 195 bits (496), Expect = 5.110e-54
Identity = 126/349 (36.10%), Postives = 178/349 (51.00%), Query Frame = 1
Query:    1 VGKMLIYGAVLGCLSPLLSIAAGLSCRSPFLTSGD---PEKREAIDAAKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGGDRARKAFCAENGISFERMRELGEVRKQLAQALAGIGFISSSRAAFDPRASVNAQARSWRAVKAAVCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQFFTRSR-GP--------DSGPGKDD-----------RVFIHPSSINFKTNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALLLFGGQVAVQAGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQDPRLDVAGSKLSEALVELLQTDGM 978
            + KMLIYGA+LGC+ P+L++AA L+ RSPF T  D    E+R A  A                                            G  A + +C + GI+  RM ++ E R+Q  ++L  IGF+   R A +   +      + +  +AAV AGLYP VMRV +  +K+++ +G GAV     AKE QFF  S  GP         +G G +D           RV IHP S+ F   +WS  W++YHE   TS+ F+RD T V P++LLLFGG + VQ     I VD W+R EA  R+ ALV  LR+R+D +L  K+QD   DVA S + + ++ LL +DG+
Sbjct:  266 ISKMLIYGALLGCIDPILTVAAALTMRSPFQTGPDGMTDEQRRAFSAMGGGCSDHLAVVCAHLEYMKEVAKR-------------------GRGAARGWCMDRGINANRMEDVNETRRQFRESLQSIGFLPRRREAAEELGAGFGYGTN-QVFRAAVLAGLYPNVMRVVKSPQKYMETLG-GAVEKLRQAKEMQFFVNSEAGPIARSADDGSNGGGSEDWDVYDIVKQLERVKIHPGSVLFHEREWSSQWVMYHELAKTSQTFMRDGTLVKPFSLLLFGGDLEVQPLNNTITVDGWIRVEASPRVGALVKELRRRMDEVLERKLQDTSFDVASSPVMQGVIRLLDSDGV 593          
BLAST of mRNA_E-fasciculatus_F_contig15274.3719.1 vs. uniprot
Match: A0A6G0XX79_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX79_9STRA)

HSP 1 Score: 199 bits (507), Expect = 9.950e-54
Identity = 120/324 (37.04%), Postives = 178/324 (54.94%), Query Frame = 1
Query:    7 KMLIYGAVLGCLSPLLSIAAGLSCRSPFLTSGDPEKREAIDAAKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGGDRARKAFCAENGISFERMRELGEVRKQLAQALAGIGFISSSRAAFDPRASVNAQARSWRAVKAAVCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQFFTRSRGPDSGPGKDDRVFIHPSSINFKTNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALLLFGGQVAVQAGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQDPRLDVAGSKLSEALVELLQTDGM 978
            K++++G +L C+ P+++IAA LS +SPFL+S  P+ R   +  KK                                             R+AFC EN +S+E +  + ++R+Q  +    +GF   + AA   + S N +      +KAA+ AGLY  V++V  P +K+ +    G +   H AK   +F RS    +   K DRVF+HPSSINF    +  PWLVY+E V TS++FVR+ T V+PYALLLFGG++ VQ   G I VDEW++F+AV RI  LV  LR +LD +L  K+ DP LD++ S + +A+ +LL T+GM
Sbjct: 1043 KVVVFGCILRCVDPVVTIAAALSSKSPFLSS--PDDRSKSEELKKLWSDPVPTSDHYLLWTAVSKFVKLEKIQ-----------------RRAFCKENSLSYESLSTIVDLRQQYLEHCQLLGFYDPANAARFNQHSTNPKV-----IKAALTAGLYGNVVQVIYPEQKYYETAN-GILAAAHVAKTLSYFIRSPQDRT---KTDRVFLHPSSINFSRGQFESPWLVYNELVQTSKLFVRESTMVAPYALLLFGGKLQVQHEKGLILVDEWIKFQAVARIGVLVKALRHQLDRLLLLKVSDPTLDLSKSAVIDAICDLLITEGM 1338          
BLAST of mRNA_E-fasciculatus_F_contig15274.3719.1 vs. uniprot
Match: A0A1V9ZPF8_9STRA (ATP-dependent RNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZPF8_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.850e-53
Identity = 120/324 (37.04%), Postives = 174/324 (53.70%), Query Frame = 1
Query:    7 KMLIYGAVLGCLSPLLSIAAGLSCRSPFLTSGDPEKREAIDAAKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGGDRARKAFCAENGISFERMRELGEVRKQLAQALAGIGFISSSRAAFDPRASVNAQARSWRAVKAAVCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQFFTRSRGPDSGPGKDDRVFIHPSSINFKTNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALLLFGGQVAVQAGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQDPRLDVAGSKLSEALVELLQTDGM 978
            K+ ++G +L C+ P+++IAA L C+SPF+T+   E R   D  K++                                          R R+ +C +N IS+E +  + ++RKQ  + L  IGF      AF+    +N  + + + VKAA+ AGLY  V+ V  P +K+ +    G +   H +K+ +FF R+          +RVFIHPSSINFK   +  PWLVY + V TS++FVR  T V+PYALLLFGG + VQ   G I VD+W+RF AV RI  LV  LR  LD  L +KI+DP LD++ S L +A+  LL T+G+
Sbjct: 1066 KVAVFGCILRCIDPIVTIAAALECKSPFVTTA--EDRNKADDIKRQLSSEIPTSDHILLSKTVSSFLNVEK-----------------RLRRQYCKDNSISYETLCSIIDLRKQYLEHLQSIGFYD----AFNGE-RLNENSANAKVVKAALTAGLYGNVLSVVYPEQKYYESAH-GVLAASHNSKDLRFFIRTLDKTK-----ERVFIHPSSINFKLGQFESPWLVYTDLVQTSKLFVRQSTMVAPYALLLFGGALEVQHEKGLIVVDDWIRFVAVARIGVLVKSLRNHLDRFLLKKIEDPTLDISKSSLVDAICHLLITEGL 1359          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15274.3719.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSE8_ECTSI8.740e-15678.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0P1AT97_PLAHL1.860e-5536.39Atp-dependent rna n=1 Tax=Plasmopara halstedii Tax... [more]
A0A7S2WS92_9STRA3.440e-5536.20Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A176W7Y6_MARPO4.760e-5538.23RNA helicase n=3 Tax=Marchantia polymorpha TaxID=3... [more]
A0A6A7G6M6_9CRUS7.200e-5533.13mRNA splicing factor ATP-dependent RNA helicase (F... [more]
A0A024U513_9STRA8.490e-5536.00Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A067CVF3_SAPPC8.530e-5536.73Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A7S1TRZ9_9STRA5.110e-5436.10Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6G0XX79_9STRA9.950e-5437.04Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9ZPF8_9STRA1.850e-5337.04ATP-dependent RNA helicase n=1 Tax=Thraustotheca c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15274contigE-fasciculatus_F_contig15274:2..985 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score478.0
Seed ortholog evalue3.5e-132
Seed eggNOG ortholog2880.D8LSE8
KEGG koko:K13026
EggNOG free text desc.helicase activity
EggNOG OGsCOG1643@1,KOG0920@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categorysignal peptide
Exons1
Model size984
Cds size975
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928008.0082629-UTR-E-fasciculatus_F_contig15274:1..101622928008.0082629-UTR-E-fasciculatus_F_contig15274:1..10Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15274 2..10 +
1695995786.5034006-UTR-E-fasciculatus_F_contig15274:1..101695995786.5034006-UTR-E-fasciculatus_F_contig15274:1..10Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15274 2..10 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928008.0266602-CDS-E-fasciculatus_F_contig15274:10..9851622928008.0266602-CDS-E-fasciculatus_F_contig15274:10..985Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15274 11..985 +
1695995786.514759-CDS-E-fasciculatus_F_contig15274:10..9851695995786.514759-CDS-E-fasciculatus_F_contig15274:10..985Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15274 11..985 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15274.3719.1prot_E-fasciculatus_F_contig15274.3719.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15274 11..985 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15274.3719.1

>prot_E-fasciculatus_F_contig15274.3719.1 ID=prot_E-fasciculatus_F_contig15274.3719.1|Name=mRNA_E-fasciculatus_F_contig15274.3719.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=325bp
MLIYGAVLGCLSPLLSIAAGLSCRSPFLTSGDPEKREAIDAAKKRMAAAG
GGRSDHTLLAVAVSEWEAAGDGGGGGGGGGGRWGGGDRARKAFCAENGIS
FERMRELGEVRKQLAQALAGIGFISSSRAAFDPRASVNAQARSWRAVKAA
VCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQFFTRSRGPDSGP
GKDDRVFIHPSSINFKTNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALL
LFGGQVAVQAGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQD
PRLDVAGSKLSEALVELLQTDGMG*
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mRNA from alignment at E-fasciculatus_F_contig15274:2..985+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15274.3719.1 ID=mRNA_E-fasciculatus_F_contig15274.3719.1|Name=mRNA_E-fasciculatus_F_contig15274.3719.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=984bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15274:2..985+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTGGGCAAGATGCTGATCTACGGGGCCGTTCTAGGCTGCCTGTCCCCCCT GCTCTCGATCGCCGCCGGTCTCAGCTGCCGATCCCCCTTCCTCACCTCGG GGGACCCCGAAAAGCGGGAGGCCATCGACGCCGCCAAGAAGCGCATGGCG GCGGCCGGCGGGGGTCGGAGCGACCACACCCTGCTTGCCGTTGCGGTGTC GGAGTGGGAGGCCGCGGGGGACGGCGGCGGCGGCGGCGGCGGTGGCGGCG GCCGGTGGGGTGGCGGAGACAGGGCGAGGAAGGCGTTCTGTGCGGAGAAC GGCATAAGCTTCGAGCGCATGCGGGAACTGGGGGAGGTGCGCAAGCAGCT CGCGCAGGCCCTGGCCGGGATCGGGTTCATCTCGAGCTCGCGTGCGGCGT TCGACCCCCGAGCGAGCGTGAACGCGCAGGCGCGCAGCTGGCGCGCGGTG AAGGCGGCCGTGTGCGCGGGGCTGTACCCACGCGTGATGCGGGTCCGCCG GCCGATGGAGAAGTTCGTGGACCTGGTGGGCGTCGGGGCCGTCCCCGTGC GGCACACGGCCAAGGAGTTCCAGTTCTTCACGCGCTCGAGGGGGCCGGAC TCCGGCCCCGGCAAGGACGACCGCGTCTTCATCCACCCTTCCTCGATAAA CTTCAAGACCAACGACTGGTCGTGCCCATGGCTGGTGTACCACGAGCGGG TGCACACGAGCAGGGTGTTCGTGCGCGACTGCACGGAGGTATCGCCGTAC GCGCTGCTGCTGTTCGGCGGTCAGGTGGCCGTGCAGGCCGGGCTGGGAAG GATCGCGGTGGACGAGTGGGTCCGGTTCGAGGCGGTCGGGCGCATCGCCG CCCTGGTGAACCGGCTCCGGCAGCGGCTGGACGGCATGCTGTGGGAGAAG ATTCAGGACCCGAGGCTGGACGTGGCCGGGTCGAAGCTCTCGGAGGCGCT CGTGGAGCTCCTTCAGACCGACGGCATGGGCTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15274:2..985+

>mRNA_E-fasciculatus_F_contig15274.3719.1 ID=mRNA_E-fasciculatus_F_contig15274.3719.1|Name=mRNA_E-fasciculatus_F_contig15274.3719.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1950bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15274:2..985+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTGATCTACGGGGCCGTTCTAGGCTGCCTGTCCCCCCTGCTCTCGAT
CGCCGCCGGTCTCAGCTGCCGATCCCCCTTCCTCACCTCGGGGGACCCCG
AAAAGCGGGAGGCCATCGACGCCGCCAAGAAGCGCATGGCGGCGGCCGGC
GGGGGTCGGAGCGACCACACCCTGCTTGCCGTTGCGGTGTCGGAGTGGGA
GGCCGCGGGGGACGGCGGCGGCGGCGGCGGCGGTGGCGGCGGCCGGTGGG
GTGGCGGAGACAGGGCGAGGAAGGCGTTCTGTGCGGAGAACGGCATAAGC
TTCGAGCGCATGCGGGAACTGGGGGAGGTGCGCAAGCAGCTCGCGCAGGC
CCTGGCCGGGATCGGGTTCATCTCGAGCTCGCGTGCGGCGTTCGACCCCC
GAGCGAGCGTGAACGCGCAGGCGCGCAGCTGGCGCGCGGTGAAGGCGGCC
GTGTGCGCGGGGCTGTACCCACGCGTGATGCGGGTCCGCCGGCCGATGGA
GAAGTTCGTGGACCTGGTGGGCGTCGGGGCCGTCCCCGTGCGGCACACGG
CCAAGGAGTTCCAGTTCTTCACGCGCTCGAGGGGGCCGGACTCCGGCCCC
GGCAAGGACGACCGCGTCTTCATCCACCCTTCCTCGATAAACTTCAAGAC
CAACGACTGGTCGTGCCCATGGCTGGTGTACCACGAGCGGGTGCACACGA
GCAGGGTGTTCGTGCGCGACTGCACGGAGGTATCGCCGTACGCGCTGCTG
CTGTTCGGCGGTCAGGTGGCCGTGCAGGCCGGGCTGGGAAGGATCGCGGT
GGACGAGTGGGTCCGGTTCGAGGCGGTCGGGCGCATCGCCGCCCTGGTGA
ACCGGCTCCGGCAGCGGCTGGACGGCATGCTGTGGGAGAAGATTCAGGAC
CCGAGGCTGGACGTGGCCGGGTCGAAGCTCTCGGAGGCGCTCGTGGAGCT
CCTTCAGACCGACGGCATGGGCTAGATGCTGATCTACGGGGCCGTTCTAG
GCTGCCTGTCCCCCCTGCTCTCGATCGCCGCCGGTCTCAGCTGCCGATCC
CCCTTCCTCACCTCGGGGGACCCCGAAAAGCGGGAGGCCATCGACGCCGC
CAAGAAGCGCATGGCGGCGGCCGGCGGGGGTCGGAGCGACCACACCCTGC
TTGCCGTTGCGGTGTCGGAGTGGGAGGCCGCGGGGGACGGCGGCGGCGGC
GGCGGCGGTGGCGGCGGCCGGTGGGGTGGCGGAGACAGGGCGAGGAAGGC
GTTCTGTGCGGAGAACGGCATAAGCTTCGAGCGCATGCGGGAACTGGGGG
AGGTGCGCAAGCAGCTCGCGCAGGCCCTGGCCGGGATCGGGTTCATCTCG
AGCTCGCGTGCGGCGTTCGACCCCCGAGCGAGCGTGAACGCGCAGGCGCG
CAGCTGGCGCGCGGTGAAGGCGGCCGTGTGCGCGGGGCTGTACCCACGCG
TGATGCGGGTCCGCCGGCCGATGGAGAAGTTCGTGGACCTGGTGGGCGTC
GGGGCCGTCCCCGTGCGGCACACGGCCAAGGAGTTCCAGTTCTTCACGCG
CTCGAGGGGGCCGGACTCCGGCCCCGGCAAGGACGACCGCGTCTTCATCC
ACCCTTCCTCGATAAACTTCAAGACCAACGACTGGTCGTGCCCATGGCTG
GTGTACCACGAGCGGGTGCACACGAGCAGGGTGTTCGTGCGCGACTGCAC
GGAGGTATCGCCGTACGCGCTGCTGCTGTTCGGCGGTCAGGTGGCCGTGC
AGGCCGGGCTGGGAAGGATCGCGGTGGACGAGTGGGTCCGGTTCGAGGCG
GTCGGGCGCATCGCCGCCCTGGTGAACCGGCTCCGGCAGCGGCTGGACGG
CATGCTGTGGGAGAAGATTCAGGACCCGAGGCTGGACGTGGCCGGGTCGA
AGCTCTCGGAGGCGCTCGTGGAGCTCCTTCAGACCGACGGCATGGGCTAG
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