mRNA_E-fasciculatus_F_contig1523.3696.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1523.3696.1 vs. uniprot
Match: D8LPX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX9_ECTSI) HSP 1 Score: 681 bits (1758), Expect = 8.040e-241 Identity = 340/388 (87.63%), Postives = 360/388 (92.78%), Query Frame = 1
Query: 310 VRDHPLAMTRSGESRETPVRDQTELKRQDRELAVTTAVRGGDAGEEKINVTHENLPKMKNVVILREEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGNHTNLHAAGKNGLERLQDWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLNLMPTLFPNVTEATLETHQRLRDLVEREPEDTFYRFVSGILAEMKREGDACNISNHHFKPQMCFCDLQEILPAFHVIPFHNMSAEAAAFAARIPEPLPI----EAADGGTVGTSKSSVGKDGSGGMAQGGRGTGVSGSRRQEIADFLTERFERARDEDVKVTGAADRKGTFLSSRVLKVVHQMFKEDYEVLGQHFPLGEEETNAASGRRTTKTPPR 1461
V DHPLA+TR G RE+PVR++ EL+RQD+EL TTAVRGGDAG+EKI VTHENLPKMKNVVILR EGIIYCPIAKVASAEWKRSLRWMVGIEDWMGNHTNLH+AGKNGLERLQ+WGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYL+LMPTLFPN TEATL+THQ LRDLVEREPEDTFY F SGILAEMKREGDAC +SNHHF+PQMCFCDL+EILPAFHVIPFHNMSAEAAAFAARIPEPLPI EA DGGT G SKSS+GKDG GGMAQGGRGTGVSGSRRQEIADFLTERFE ARD+DVKVTGAADRK FLS+RVL+VVHQMFKEDYEVLGQ+FP GEEE N ASGRRTTKTPP+
Sbjct: 3 VSDHPLAITRFGGRRESPVRERNELERQDQELVGTTAVRGGDAGKEKIVVTHENLPKMKNVVILRGEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGNHTNLHSAGKNGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLSLMPTLFPNATEATLDTHQTLRDLVEREPEDTFYHFASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVIPFHNMSAEAAAFAARIPEPLPISPHKEATDGGTAGISKSSIGKDGPGGMAQGGRGTGVSGSRRQEIADFLTERFETARDKDVKVTGAADRKNMFLSNRVLRVVHQMFKEDYEVLGQYFPPGEEEINTASGRRTTKTPPQ 390
BLAST of mRNA_E-fasciculatus_F_contig1523.3696.1 vs. uniprot
Match: D7G2B9_ECTSI (Similar to dermatan 4-sulfotransferase-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B9_ECTSI) HSP 1 Score: 171 bits (432), Expect = 9.810e-45 Identity = 96/297 (32.32%), Postives = 147/297 (49.49%), Query Frame = 1
Query: 508 EGIIYCPIAKVASAEWKRSLRWMVGIEDWMGNHTNLHAAGKNGLERLQDWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLNLMPTLFPNVTEATLETHQRLRDLVEREPEDTFYRFVSGILAEMKREGDACNISNHHFKPQMCFCDLQEILPAFHVIPFHNMSAEAAAFAARIPEPLPIEAADGGTVGTSKSSVGKDGSGGMAQGGRGTGVSGSRRQEIADFLTERFERARDEDVKVTGAADRKGTFLSSRVLKVVHQMFKEDYEVLGQHF 1398
+G+IYCPIAKVA AEW+++LRWM+GI DW + +H GKNG+ L I + D + +FVVVRDPA+RL+SAFLNKC+ + NC Y MP FP V++ T + R + EP F F+ G+ +++ G C + N H++PQ CFC + ++HV+PF NMS EA + P P R + + +F+ +RF + ++D K GA ++ + S L V+ ++ +DY + G++F
Sbjct: 10 DGMIYCPIAKVACAEWRKTLRWMLGIPDW--DTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQ----------NCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLTG--CKV-NSHWRPQHCFCSIARFRESYHVVPFANMSTEAVNLVDHMRRPSP-----------------------------------DRAELLREFIVQRF--SSNQDAKAQGATSKRERYFSQEALDVIKMVYGKDYSLFGEYF 254
BLAST of mRNA_E-fasciculatus_F_contig1523.3696.1 vs. uniprot
Match: A0A6H5JC58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC58_9PHAE) HSP 1 Score: 155 bits (391), Expect = 5.550e-37 Identity = 78/190 (41.05%), Postives = 110/190 (57.89%), Query Frame = 1
Query: 508 EGIIYCPIAKVASAEWKRSLRWMVGIEDWMGNHTNLHAAGKNGLERLQDWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLNLMPTLFPNVTEATLETHQRLRDLVEREPEDTFYRFVSGILAEMKREGDACNISNHHFKPQMCFCDLQEILPAFHVIPFHNMSA 1077
+G+IYCPIAKVA AEW+++LRWM+GI DW + +H GKNG+ L I + D + +FVVVRDPA+RL+SAFLNKC+ + NC Y MP FP V++ T + R + EP F F+ G+ +++ G C + N H++PQ CFC + ++HV+PF NMSA
Sbjct: 175 DGMIYCPIAKVACAEWRKTLRWMLGIPDW--DTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQ----------NCPYTEFMPQRFPGVSKRDAATDTKFRAAINDEPRKVFRDFMLGVQKDVRLRG--CKV-NSHWRPQHCFCSIARFRESYHVVPFANMSA 349
BLAST of mRNA_E-fasciculatus_F_contig1523.3696.1 vs. uniprot
Match: A0A6H5JKQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ4_9PHAE) HSP 1 Score: 118 bits (295), Expect = 4.520e-25 Identity = 98/351 (27.92%), Postives = 147/351 (41.88%), Query Frame = 1
Query: 403 LAVTTAVRGGDAGEEKINVTHEN---------LPK-MKNVVILREEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGNHTNLHAAGKNGLERLQDWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGA-PNCAYLNLMPTLFPNV-------TEATLETHQRLRD-LVEREPEDTFYRFVSGILAEMKREGDACNISNHHFKPQMCFCDLQEILPAFHVIPFHNMSAEAAAFAARIPEPLPIEAADGGTVGTSKSSVGKDGSGGMAQGGRGTGVSGSRRQEIADFLTERFERARDEDVKVTGAADRKGTFLSSRVLKVVHQMFKEDYEVLGQHF 1398
+AV GG G ++ V + LP+ + L+ E I+YCPI KVA EW + RW+ G EDW H GL+ L++ +E L S + +F VVR+PA+RL+S FL KC R N + NC YL L P LF T ++T + + R + F +V I +K+ D C N H+ PQ C C L P F ++ + NM+ AA AA +P S +R EI +FL +R + + K T A R ++ L+ VH+ + +DY++ Q++
Sbjct: 68 VAVGALTNGGGEGGDRNGVVPSDVTGALVELELPRHFDGALALKSERIVYCPIQKVACTEWIKVFRWIDGHEDWAEPRHQKH-----GLDVLEEMDVERGNQILNSPDWLKFAVVREPAQRLLSCFLQKC-------NRYNMENEYSNCPYLELWPDLFDRERFPDGVPTRPGVDTLAIVWEAFTSRGRDSMFAPYVEVITRRVKQ--DPCG-QNKHWSPQYCHCSLDVTAPVFRIVGWANMTE--AASAAIVP----------------------------------FASSSARGLEIKEFLVDRMDTNHERHGKKTSAGSRSQEAYTAEALQAVHEAYAKDYKLFSQYW 367
BLAST of mRNA_E-fasciculatus_F_contig1523.3696.1 vs. uniprot
Match: A0A7S2ZYV0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZYV0_9RHOD) HSP 1 Score: 67.4 bits (163), Expect = 2.040e-8 Identity = 54/198 (27.27%), Postives = 89/198 (44.95%), Query Frame = 1
Query: 490 VVILREEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGNHTNLHAAGKNGLERLQDWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLNLMPTLFPNVTEATLETHQRLRDLVEREPEDTFYRFVSGILAEMKREGDACNISNHHFKPQMCFCDLQEILPAFHVIPFHNMSAEA 1083
+++ + I+CP+ KVA++ WK +R + G +D+M + H +GL L D+ E + + L Y +FV VRDP RL+SA+++K V + Y + L+ H R D + + +F FV +L K++ D N H+ PQ C E+ P V F N+ +A
Sbjct: 85 IIVSEKHKFIFCPVPKVANSNWKYLIRKIEGAKDYM-DLALAHDQHTSGLRYLSDYSPEEVEYLLYKSGYHKFVFVRDPYTRLLSAYMDKLVNKYESKEE----------YRIWLGKLYD-------WKHVRESDFIN-DARPSFQAFVDELL---KQDPDRMN---EHWMPQAYVCGFGEV-PYDFVGRFENIERDA 256
BLAST of mRNA_E-fasciculatus_F_contig1523.3696.1 vs. uniprot
Match: A0A812M394_9DINO (Chst8 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812M394_9DINO) HSP 1 Score: 65.9 bits (159), Expect = 7.730e-8 Identity = 32/91 (35.16%), Postives = 49/91 (53.85%), Query Frame = 1
Query: 496 ILREEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGNHTNLHAAGK-NGLERLQDWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCV 765
++ I++C + K S+ W R LRW+ G DW GN L + G GL RL+ E + ++ + VVRDP +RL SA+L++ V
Sbjct: 79 VIPSRRIVFCDVQKAGSSRWLRLLRWLAGSPDWDGNPHFLDSEGHPGGLRRLEHLPREEAVQIMRDPKWTKIAVVRDPLDRLRSAYLDRVV 169
BLAST of mRNA_E-fasciculatus_F_contig1523.3696.1 vs. uniprot
Match: A0A812TG46_9DINO (Chst9 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812TG46_9DINO) HSP 1 Score: 63.9 bits (154), Expect = 2.520e-7 Identity = 48/194 (24.74%), Postives = 81/194 (41.75%), Query Frame = 1
Query: 493 VILREEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGNHTNLHAAGKNGLE----RLQDWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLNLMPTLFPNVTEATLETHQRLRDLVEREPEDTFYRFVSGILAEMKREGDACNISNHHFKPQMCFCDLQEILPAFHVIPF 1062
+++ +++C I K ++ W R LRWM G++DW +N H A NGL +L+ ++ + + VVRDP +RL SA+L+K ++ + + NL F N T + F F+S + M+ D + H++ Q CDL LP + + F
Sbjct: 46 IVIPSHRLVFCHIPKAGTSRWLRILRWMAGVQDW---DSNPHFADANGLLGGLLQLKHLPTSEALRIMQDPAWTKMAVVRDPLDRLRSAYLDKILSASDPQNHWLTE--------NLFGLPFENFTSTS------------------FSNFLSRVEVGMRHSLDH---EDRHWQRQARLCDLGRFLPYYQHVFF 207
BLAST of mRNA_E-fasciculatus_F_contig1523.3696.1 vs. uniprot
Match: UPI0018983140 (carbohydrate sulfotransferase 10 isoform X1 n=2 Tax=Nematolebias whitei TaxID=451745 RepID=UPI0018983140) HSP 1 Score: 64.7 bits (156), Expect = 2.630e-7 Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 1
Query: 454 NVTHENLPK--MKNVVILREEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGN--HTNLHAAGKNGLERLQDWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCV 765
N+TH ++ K + + + + I++C KV + +WK+ L + G+ + + +H KNGL RL + + IT L D YF+F +VRDP ERL+SAF +K V
Sbjct: 132 NLTHASISKFVLNRIFVCDKHKILFCQTPKVGNTQWKKVLIVLNGVFTSVEEIPESLVHDHEKNGLPRLSSFTPQEITHRL--DAYFKFFIVRDPFERLISAFKDKFV 237
BLAST of mRNA_E-fasciculatus_F_contig1523.3696.1 vs. uniprot
Match: A0A8J6KMM1_ELECQ (Carbohydrate sulfotransferase n=3 Tax=Hyloidea TaxID=8417 RepID=A0A8J6KMM1_ELECQ) HSP 1 Score: 64.3 bits (155), Expect = 2.870e-7 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 1
Query: 454 NVTHENLPK--MKNVVILREEGIIYCPIAKVASAEWKRSLRWMVG----IEDWMGNHTNLHAAGKNGLERLQDWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCV 765
N++H + K + + + I++C KV + +WK+ L + G IED N + H KNGL RL + +E + L S YF+F++VRDP ERL+SA+ +K V
Sbjct: 98 NLSHSGISKFVLDRIFVSDRHKILFCQTPKVGNTQWKKVLIVLNGAYSSIEDIPENVVHDH--DKNGLPRLSSYSMEDVQERLNS--YFKFLIVRDPFERLISAYKDKFV 203
BLAST of mRNA_E-fasciculatus_F_contig1523.3696.1 vs. uniprot
Match: A0A3B5N139_9TELE (Carbohydrate sulfotransferase n=1 Tax=Xiphophorus couchianus TaxID=32473 RepID=A0A3B5N139_9TELE) HSP 1 Score: 63.9 bits (154), Expect = 3.940e-7 Identity = 40/110 (36.36%), Postives = 62/110 (56.36%), Query Frame = 1
Query: 454 NVTHENLPK--MKNVVILREEGIIYCPIAKVASAEWKRSLRWMVG----IEDWMGNHTNLHAAGKNGLERLQDWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCV 765
N+TH ++ K + + + + I++C KV + +WK+ L + G +E+ N + H KNGL RL + + IT L S YF+F +VRDP ERL+SAF +K V
Sbjct: 99 NLTHVSISKFVLDRIFVCDKRQILFCQTPKVGNTQWKKVLIVLNGGFPSVEEIPENLVHDH--DKNGLPRLSSFSPQEITQRLNS--YFKFFIVRDPFERLISAFKDKFV 204 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1523.3696.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1523.3696.1 >prot_E-fasciculatus_F_contig1523.3696.1 ID=prot_E-fasciculatus_F_contig1523.3696.1|Name=mRNA_E-fasciculatus_F_contig1523.3696.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=488bp MAPTPSDVRPLRKAGRVRCSNGLVLLCLVGAATRAVPMTGSSSLAPPRPAback to top mRNA from alignment at E-fasciculatus_F_contig1523:3685..15471- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1523.3696.1 ID=mRNA_E-fasciculatus_F_contig1523.3696.1|Name=mRNA_E-fasciculatus_F_contig1523.3696.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=11787bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1523:3685..15471- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1523:3685..15471- >mRNA_E-fasciculatus_F_contig1523.3696.1 ID=mRNA_E-fasciculatus_F_contig1523.3696.1|Name=mRNA_E-fasciculatus_F_contig1523.3696.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2928bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1523:3685..15471- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |