mRNA_E-fasciculatus_F_contig10463.367.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10463.367.1 vs. uniprot
Match: D8LM17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM17_ECTSI) HSP 1 Score: 198 bits (503), Expect = 2.360e-52 Identity = 97/104 (93.27%), Postives = 99/104 (95.19%), Query Frame = 1
Query: 844 LAEEDVPPVEVKVTEAGDLIYSMRESAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLARKLGCDLMRVSKKFSGWACVGRRGFQPVRHPDGRASR 1155
L+EEDVP VEVK TE GD IYS+RESAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLA KLGCDLMRVSKKFSGWACVGRRGFQPVRHPDGRASR
Sbjct: 91 LSEEDVPLVEVKATEGGDSIYSLRESAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQPVRHPDGRASR 194
BLAST of mRNA_E-fasciculatus_F_contig10463.367.1 vs. uniprot
Match: A0A6H5KX67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX67_9PHAE) HSP 1 Score: 176 bits (447), Expect = 4.630e-45 Identity = 89/104 (85.58%), Postives = 94/104 (90.38%), Query Frame = 1
Query: 976 VVRDFEEGVLDAPAGAGLRKLLARKLGCDLMRVSKKFSGWACVGRRGFQPVRHPDGRASRAKESMFKMEQSWLKSLASRSSKPAGNVAINDGSIGIGISTVSAS 1287
V+RDFEEGVLDAPAGAGLRKLLA KLGCDLMRVSKKFSGWACVGRRGFQPVRH D RA RAKESMFKMEQSWLK LAS+SSKP GNVAINDGS GI +VS++
Sbjct: 4 VIRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQPVRHNDARALRAKESMFKMEQSWLKFLASKSSKPNGNVAINDGSSGIAAVSVSST 107
BLAST of mRNA_E-fasciculatus_F_contig10463.367.1 vs. uniprot
Match: A0A6H5KQ47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ47_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 4.860e-20 Identity = 61/108 (56.48%), Postives = 67/108 (62.04%), Query Frame = 3
Query: 102 MRQPPAH-----PAGSILLLC------PPPSRIGSTQPLASGLIAATVLFVVFIEYASVRTTAGFSWREGGGVGRCRRCGSSSNYYCCCGRRSRWISQQQRSLDSVRG 392
M+ PP H P LL+ PPPSRIG TQ ++SGL AT F+VFI ASVRTTAG SWR+GGGVG CR C SS N CGRR R SQQ R LDSV G
Sbjct: 1 MQTPPKHSGHHLPQSYSLLVAGSFLRGPPPSRIGRTQSVSSGLTTATAFFIVFIVDASVRTTAGSSWRQGGGVGPCRPCDSSRN----CGRRPRRNSQQ-RPLDSVTG 103
BLAST of mRNA_E-fasciculatus_F_contig10463.367.1 vs. uniprot
Match: A0A1Z5JKA6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA6_FISSO) HSP 1 Score: 93.2 bits (230), Expect = 5.170e-17 Identity = 53/122 (43.44%), Postives = 76/122 (62.30%), Query Frame = 1
Query: 883 TEAGDLIYSMRESAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLARKLGCDLMRVSKKFSGWACVGRRGFQP-VRHPDGRAS--RAKESMFKMEQSWLKSLASRSSKPAGNVA 1239
T+A L+ S R + RRGKW+ EE Y RV++DF G LDAPAG LR L+ KL CD MR++KKF+G AC+G+R F P VR P+ ++ +A+ + +E+ W + L S+ A +A
Sbjct: 143 TDASKLLGSER-NGRLRRGKWTAEEEAYVARVIQDFNSGFLDAPAGTTLRTYLSEKLQCDPMRITKKFTGDACIGKRVFHPAVRSPNNVSTIDKAQAELLHLEKRWHRRLESQQRDSAKKLA 263
BLAST of mRNA_E-fasciculatus_F_contig10463.367.1 vs. uniprot
Match: B7FR00_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FR00_PHATC) HSP 1 Score: 90.9 bits (224), Expect = 5.520e-16 Identity = 47/102 (46.08%), Postives = 67/102 (65.69%), Query Frame = 1
Query: 907 SMRESAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLARKLGCDLMRVSKKFSGWACVGRRGFQP-VRHPDGRAS--RAKESMFKMEQSWLKSL 1203
S+R+++ RRGKW+ EE Y RV++DF G LDAPAG LR L+ KL CD MR++KKF+G AC+G+R F P VR P + +A+ + +E+ W + L
Sbjct: 219 SVRKTSGLRRGKWTVEEEAYVARVIQDFNSGFLDAPAGTTLRTFLSEKLQCDPMRITKKFTGDACIGKRVFHPAVRSPSNGTAIDKAQAELHGLERRWQRRL 320
BLAST of mRNA_E-fasciculatus_F_contig10463.367.1 vs. uniprot
Match: A0A7S2A0M8_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A0M8_TRICV) HSP 1 Score: 84.0 bits (206), Expect = 1.130e-15 Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 1
Query: 925 PTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLARKLGCDLMRVSKKFSGWACVGRRGFQP-VRHPDGRAS--RAKESMFKMEQSWLKSL 1203
P RRGKW+ EE Y RV+++F G L+APAGA LR L+ +L CD MR++KKF+G AC+G+R F P VR A+ +A+ + +E+ W + L
Sbjct: 28 PLRRGKWTVEEEAYVARVIQEFNSGYLNAPAGATLRTYLSERLHCDPMRITKKFTGDACIGKRVFHPAVRCATNAAAIDKARAELDALERRWRRRL 123
BLAST of mRNA_E-fasciculatus_F_contig10463.367.1 vs. uniprot
Match: A0A6U5EM58_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EM58_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.550e-15 Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 925 PTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLARKLGCDLMRVSKKFSGWACVGRRGFQPV 1128
P RRGKW+ EE Y RV+RDF G L APAG LR L+ KL CD MR++KKF+G AC+G+R F PV
Sbjct: 136 PLRRGKWTSEEEAYVARVIRDFNAGYLAAPAGTTLRSYLSDKLHCDPMRITKKFTGDACIGKRVFHPV 203
BLAST of mRNA_E-fasciculatus_F_contig10463.367.1 vs. uniprot
Match: A0A7S2R8R9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8R9_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 8.600e-15 Identity = 47/108 (43.52%), Postives = 67/108 (62.04%), Query Frame = 1
Query: 931 RRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLARKLGCDLMRVSKKFSGWACVGRRGFQPV-RHP--DGRASRAKESMFKMEQSWLKSL------ASRSSKPA 1227
RRGKW+ EE Y ++++ DF G L AG LR L+ KL CD MR++KKF+G +C+G+R F P+ R+P D + S A+E++ ++E WL L A R SK A
Sbjct: 166 RRGKWTPEEERYVQQIINDFNNGTLAVSAGTTLRSYLSAKLNCDPMRITKKFTGDSCIGKRVFHPLERNPLNDAQVSEARETLKRLEARWLAKLDEQKRDADRKSKKA 273
BLAST of mRNA_E-fasciculatus_F_contig10463.367.1 vs. uniprot
Match: A0A8J2WXF8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXF8_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.090e-14 Identity = 43/98 (43.88%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 913 RESAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLARKLGCDLMRVSKKFSGWACVGRRGFQPVRHPDGRA-SRAKESMFKMEQSWLKSL 1203
R S+ RRGKW++ EE Y +RV+RDF G+LDA G LR L+ KL CD MR++KKF+G A +G+R F P + A R++ + ++E W + L
Sbjct: 3 RPSSGLRRGKWTQEEEAYVERVIRDFNGGLLDAAPGTTLRSYLSDKLNCDPMRITKKFTGDASIGKRVFHPRENASPAAVERSRREIAELEAIWRRKL 100
BLAST of mRNA_E-fasciculatus_F_contig10463.367.1 vs. uniprot
Match: A0A7S1D940_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D940_CYCTE) HSP 1 Score: 85.9 bits (211), Expect = 1.190e-14 Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 931 RRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLARKLGCDLMRVSKKFSGWACVGRRGFQP-VRHPDGRAS--RAKESMFKMEQSWLKSL 1203
RRGKW+ EE Y RV++DF G L+APAG LR L+ KL CD MR++KKF+G AC+G+R F P VR P A+ +A+ + +E+ W + L
Sbjct: 78 RRGKWTVEEEAYVARVIQDFNSGYLNAPAGTTLRSYLSEKLHCDPMRITKKFTGDACIGKRVFHPAVRCPSNTAAIDKAQGELDALERRWRRRL 171 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10463.367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10463.367.1 >prot_E-fasciculatus_F_contig10463.367.1 ID=prot_E-fasciculatus_F_contig10463.367.1|Name=mRNA_E-fasciculatus_F_contig10463.367.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=453bp DKETERQRAAGSKRRCRSGSSSAEEEDGRVGRELCDNHQHTPPGPSSSFAback to top mRNA from alignment at E-fasciculatus_F_contig10463:7..3893- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10463.367.1 ID=mRNA_E-fasciculatus_F_contig10463.367.1|Name=mRNA_E-fasciculatus_F_contig10463.367.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3887bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10463:7..3893- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10463:7..3893- >mRNA_E-fasciculatus_F_contig10463.367.1 ID=mRNA_E-fasciculatus_F_contig10463.367.1|Name=mRNA_E-fasciculatus_F_contig10463.367.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2718bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10463:7..3893- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |