prot_E-fasciculatus_F_contig1512.3629.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1512.3629.1
Unique Nameprot_E-fasciculatus_F_contig1512.3629.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length548
Homology
BLAST of mRNA_E-fasciculatus_F_contig1512.3629.1 vs. uniprot
Match: A0A6H5L688_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L688_9PHAE)

HSP 1 Score: 674 bits (1738), Expect = 1.270e-226
Identity = 395/548 (72.08%), Postives = 409/548 (74.64%), Query Frame = 0
Query:    1 MRKNADARRGEGAGQGLRGWWRRWRHRRSGCDDGGSSRYSEGRGASRRSEGGRSSGISAAXXXXXXXXXXXXXXXRARKGRRGRAHWTLTKGVASGAIVPSSLPETLLCQAFYNPAIIMIVEALLDPKAQDYRKTRRRPGRHSGNEREGAAPPSQGSDEDGGDNDGCHXXXXXXXXXXXXXXXXXXXXADERRGRRPTSGGGGVSFLAQILPPRRFFTEAMLRGYRPNFQASALMNFMLGEYDALPFGLLRHGKAGSTCGPAGEAPKFVHCCPDPGQKVMPLDKVFLLAPNLGSWRRMQLESPPSASLPAAGNNSRFPPEDGQSPTTPDLTPPPIGAGTVNSPDQRGFPPETPCAVTDDRGFPVLEEDIFGLQQEGSCSIARSPSHRQRRRGRGGG---GPAADWRGSLESGHHGNNENDVSASSPSSPVPGEAPPQHRNLFLSPFSSTLPPETATLPATSRFDANRTSWVGRAASIGTGGARGGADGGRGGLQRQRPAKGSHAKLDLLLHEMHRLNGRLDTIVGRLGVLEGGNRTDRGDSESAKQIP 545
            M KNADAR GEGAGQ LRGWWRRWRHR  GCDD GSSRYSEGRGASR SEG RSS I +    XXXXXXXXXXX RAR GRRGRAHWTLTKGVASGAIVPSSLPETLLCQAFYNPAIIMIVEALLDPKAQ Y K RRRPGRH  NEREGAA PSQ SDEDGGDNDGC                     AD   GRRPTSGG G                             ALMNFMLGEYDALPFGLLRHGKAGS CG  GE PKFVHCCPDPGQKVMPLDKVFLLAPNL SW RMQL+SPP A LPAAGNNSRF P D  S TTPDLTPPPIGA T +SP++RGFPPETP AVT DR FPVLE DIFGLQQ   CS+ARSPSHRQR          GPAADWRGS ++GHHG+NE D+SASSPS           RNLFLSPFSSTLPPETATLPATSRFDA+RTSWVGRAASI TGGARG         Q+QR  KGSHAKLDLLL EM RLNGRLDTIVGRLGVLEG NRT+R D ESAKQ+P
Sbjct:  871 MHKNADARGGEGAGQRLRGWWRRWRHRHLGCDDDGSSRYSEGRGASRCSEGDRSSAIPSVSGGXXXXXXXXXXXARARVGRRGRAHWTLTKGVASGAIVPSSLPETLLCQAFYNPAIIMIVEALLDPKAQVYSKARRRPGRHPWNEREGAAAPSQVSDEDGGDNDGCRDGGECEGESGVGAREEGRDGADGG-GRRPTSGGVG-----------------------------ALMNFMLGEYDALPFGLLRHGKAGSPCGSVGEVPKFVHCCPDPGQKVMPLDKVFLLAPNLDSWERMQLDSPPPALLPAAGNNSRFSPGDRLSSTTPDLTPPPIGANTTDSPNKRGFPPETPSAVTGDRRFPVLEGDIFGLQQGDPCSMARSPSHRQRXXXXXXXXXVGPAADWRGSPDNGHHGSNEIDMSASSPS-----------RNLFLSPFSSTLPPETATLPATSRFDADRTSWVGRAASIRTGGARGXXXXXXXXSQQQRHPKGSHAKLDLLLQEMQRLNGRLDTIVGRLGVLEGENRTNRVDGESAKQVP 1377          
BLAST of mRNA_E-fasciculatus_F_contig1512.3629.1 vs. uniprot
Match: D8LPX0_ECTSI (Cation chanel protein, possibly calcium-activated BK potassium channel, alpha subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX0_ECTSI)

HSP 1 Score: 621 bits (1601), Expect = 5.490e-207
Identity = 367/547 (67.09%), Postives = 385/547 (70.38%), Query Frame = 0
Query:    1 MRKNADARRGEGAGQGLRGWWRRWRHRRSGCDDGGSSRYSEGRGASRRSEGGRSSGISAAXXXXXXXXXXXXXXXRARKGRRGRAHWTLTKGVASGAIVPSSLPETLLCQAFYNPAIIMIVEALLDPKAQDYRKTRRRPGRHSGNEREGAAPPSQGSDEDGGDNDGCHXXXXXXXXXXXXXXXXXXXXADERRGRRPTSGGGGVSFLAQILPPRRFFTEAMLRGYRPNFQASALMNFMLGEYDALPFGLLRHGKAGSTCGPAGEAPKFVHCCPDPGQKVMPLDKVFLLAPNLGSWRRMQLESPPSASLPAAGNNSRFPPEDGQSPTTPDLTPPPIGAGTVNSPDQRGFPPETPCAVTDDRGFPVLEEDIFGLQQEGSCSIARSPSHRQRRRGRGGGGPAADWRGSLESGHHGNNENDVSASSPSSPVPGEAPPQHRNLFLSPFSSTLPPETATLPATSRFDANRTSWVGRAASIGTGGARGGADGGRGGLQRQRPAKGSHAKLDLLLHEMHRLNGRLDTIVGRLGVLEGGNRTDRGDSESAKQIPRR 547
            M KNADA+ GEGAGQ L  WWRRWRHR+ GCDD  SSRYSEGRGASRRSEG R+SGI +    XXXXXXXXXXXXRAR+GRRGRAHWTLTKGVASGAIVPSSLPETLLCQAFYNPAIIMIVEALLDPKAQDYRKTRRRPGRHS NER+GAA PSQ                                                                             ALMNFMLGEYDALPFGLLRHG+AGS CG                        VFLLAPNL SW RMQL+SPP ASLPAAG NSRFPP D  S TTPDLTPPPIGA T NSP++RGFPPETPCAV  DRGFP L++DIFGLQ+E  CSI RSPSHRQRR G    GPA DWRGSL++G+HGNNEND+SASSPSSPV G  P QHRNLF SPFSSTLPPETATLPATSRFDANRTSWVGRAASIGTGGARG         Q+QR  KGSHAKLDLLLHEM RLNGRLDTIVGRLGVLEG NRTDR D ESAKQ P R
Sbjct:  861 MHKNADAQGGEGAGQRLTSWWRRWRHRQLGCDDDRSSRYSEGRGASRRSEGDRNSGIPSVSGGXXXXXXXXXXXXRAREGRRGRAHWTLTKGVASGAIVPSSLPETLLCQAFYNPAIIMIVEALLDPKAQDYRKTRRRPGRHSWNERDGAAAPSQ-----------------------------------------------------------------------------ALMNFMLGEYDALPFGLLRHGEAGSPCG-----------------------SVFLLAPNLDSWERMQLDSPPPASLPAAGTNSRFPPGDRLSSTTPDLTPPPIGATTANSPNKRGFPPETPCAVLGDRGFPFLQDDIFGLQEEDPCSIERSPSHRQRRPGXXXXGPAVDWRGSLDNGYHGNNENDMSASSPSSPVTGGTPQQHRNLFPSPFSSTLPPETATLPATSRFDANRTSWVGRAASIGTGGARGXXXXXXXXSQQQRHPKGSHAKLDLLLHEMQRLNGRLDTIVGRLGVLEGENRTDRVDGESAKQTPGR 1307          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1512.3629.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L688_9PHAE1.270e-22672.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPX0_ECTSI5.490e-20767.09Cation chanel protein, possibly calcium-activated ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10027CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAINcoord: 78..290
NoneNo IPR availablePANTHERPTHR10027:SF10SLOWPOKE POTASSIUM CHANNEL FAMILYcoord: 78..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1512contigE-fasciculatus_F_contig1512:1219..3422 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1512.3629.1mRNA_E-fasciculatus_F_contig1512.3629.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1512 22..3422 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1512.3629.1 ID=prot_E-fasciculatus_F_contig1512.3629.1|Name=mRNA_E-fasciculatus_F_contig1512.3629.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=548bp
MRKNADARRGEGAGQGLRGWWRRWRHRRSGCDDGGSSRYSEGRGASRRSE
GGRSSGISAASGGGGGGVSAAAAAARARKGRRGRAHWTLTKGVASGAIVP
SSLPETLLCQAFYNPAIIMIVEALLDPKAQDYRKTRRRPGRHSGNEREGA
APPSQGSDEDGGDNDGCHDGGECEDGRGGGAREGGRDGADERRGRRPTSG
GGGVSFLAQILPPRRFFTEAMLRGYRPNFQASALMNFMLGEYDALPFGLL
RHGKAGSTCGPAGEAPKFVHCCPDPGQKVMPLDKVFLLAPNLGSWRRMQL
ESPPSASLPAAGNNSRFPPEDGQSPTTPDLTPPPIGAGTVNSPDQRGFPP
ETPCAVTDDRGFPVLEEDIFGLQQEGSCSIARSPSHRQRRRGRGGGGPAA
DWRGSLESGHHGNNENDVSASSPSSPVPGEAPPQHRNLFLSPFSSTLPPE
TATLPATSRFDANRTSWVGRAASIGTGGARGGADGGRGGLQRQRPAKGSH
AKLDLLLHEMHRLNGRLDTIVGRLGVLEGGNRTDRGDSESAKQIPRR*
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