mRNA_E-fasciculatus_F_contig1510.3615.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1510.3615.1
Unique NamemRNA_E-fasciculatus_F_contig1510.3615.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1510.3615.1 vs. uniprot
Match: D8LQS1_ECTSI (Short-chain dehydrogenase/reductase SDR n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS1_ECTSI)

HSP 1 Score: 453 bits (1165), Expect = 6.680e-155
Identity = 242/260 (93.08%), Postives = 247/260 (95.00%), Query Frame = 3 
Query:  102 MAMKLEGRVALVTGASSGIGKATAIAFAKEGAKVVIAARREVKLDEVAEEIKSAGGDVAVVMGDVSKEADCKKMVDAAIEVFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNINVKSIAWCLKYQIPAMKDTAGGQGSIIVNTSVTGLRPSALPGLAGAGMYSASKAAAEMIMKYAAIEVRRGSSGVRVNSVAPGLVETPIFGDMPVDALVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMKA 881
            MAMKLEG VALVTGASSGIGKATA AFAKEGAKVVIAARREVKLDEVA EIKSAGG+VAVV+GDVSKE DCKKMVD AIE FGGLHVAFNNAGVFKTVPFVDITEDTIDDILN NVKSIAWCLKYQIPAMKDTAGG+GSIIVNTSVTGLRPSALPGL GAGMYSASKAAAEM+MKYAAIE    +SGVRVNSVAPGLVETPIFGDMPVD LVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMKA
Sbjct:    1 MAMKLEGCVALVTGASSGIGKATATAFAKEGAKVVIAARREVKLDEVAAEIKSAGGEVAVVVGDVSKEMDCKKMVDTAIEKFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNTNVKSIAWCLKYQIPAMKDTAGGKGSIIVNTSVTGLRPSALPGLTGAGMYSASKAAAEMLMKYAAIE--GAASGVRVNSVAPGLVETPIFGDMPVDTLVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMKA 258
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BLAST of mRNA_E-fasciculatus_F_contig1510.3615.1 vs. uniprot
Match: D8LQS3_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQS3_ECTSI)

HSP 1 Score: 394 bits (1012), Expect = 8.610e-132
Identity = 208/258 (80.62%), Postives = 228/258 (88.37%), Query Frame = 3 
Query:  108 MKLEGRVALVTGASSGIGKATAIAFAKEGAKVVIAARREVKLDEVAEEIKSAGGDVAVVMGDVSKEADCKKMVDAAIEVFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNINVKSIAWCLKYQIPAMKDTAGGQGSIIVNTSVTGLRPSALPGLAGAGMYSASKAAAEMIMKYAAIEVRRGSSGVRVNSVAPGLVETPIFGDMPVDALVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMKA 881
            MKLEG VALVTGAS GIGK+TAIAFAKEGAKVVIAARRE KL EVA+EIK+AGGDVA+ +GD SKEADCKKMVD AIE FGGLHVAFNNAGVF+ VPF DITEDTIDD+LNINVKS+AWC KYQIPAMK+TAGG+GSIIVNTS T LR +ALPG+AG GMYSASKAAAEM+MKYAAIE    +SGVRVNSV+PG VETPI+G+MP + LVA  G TQL+ RP  PEEIA VVIFLASEDA MVTGSTYTMDGGWA+KA
Sbjct:    1 MKLEGCVALVTGASGGIGKSTAIAFAKEGAKVVIAARREDKLKEVADEIKAAGGDVALAVGDASKEADCKKMVDTAIEKFGGLHVAFNNAGVFRAVPFADITEDTIDDLLNINVKSLAWCFKYQIPAMKNTAGGKGSIIVNTSSTALRTTALPGMAGGGMYSASKAAAEMLMKYAAIE--GAASGVRVNSVSPGHVETPIYGEMPRETLVAVTGTTQLIARPIKPEEIANVVIFLASEDAAMVTGSTYTMDGGWAIKA 256
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BLAST of mRNA_E-fasciculatus_F_contig1510.3615.1 vs. uniprot
Match: A0A835ZCI5_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI5_9STRA)

HSP 1 Score: 245 bits (626), Expect = 7.290e-74
Identity = 138/262 (52.67%), Postives = 185/262 (70.61%), Query Frame = 3 
Query:   99 MMAMKLEGRVALVTGASSGIGKATAIAFAKEGAKVVIAARREVKLDEVAEEIKSAGGDVAVVMGDVSKEADCKKMVDAAIEVFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNINVKSIAWCLKYQIPAMKDTAGGQGSIIVNTSVTGLRPSALPGLAGAGMYSASKAAAEMIMKYAAIEVRRGSSGVRVNSVAPGLVETPIFGD-MPVDALVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMKA 881
            M A + EGRVA+VTGASSG+G ATA   A EGAKVV+ AR + KL+  A +IK+ GGDV  V  DVSK+A  K++VDAA+  +G LH+AF NAG +   P   +TE+  D I ++NVKS+A+ LK+ +PA++ + GG GS+I+N+S   LR +A P  AG G+YSASKAAA+M+MKYAAIE  +  +  RVNS+APG+V+T I G+ M  ++  AFA    LV R   PEEIA  V FLAS++AT +TGS + +DGGW +KA
Sbjct:    1 MAAKRFEGRVAVVTGASSGMGLATAAQLAAEGAKVVMVARTKDKLEAAAADIKAKGGDVLAVAADVSKDAANKEIVDAALSAYGKLHIAFLNAGTYGGAPVDQVTEELFDKIFDVNVKSVAFGLKHVLPAIEKSGGG-GSVIINSSGMALRATANPAFAGGGLYSASKAAADMVMKYAAIEASKHKT--RVNSIAPGIVQTAIMGEGMTDESYNAFAAPVSLVGRVGTPEEIAPFVCFLASDEATFITGSVHEVDGGWGLKA 259
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BLAST of mRNA_E-fasciculatus_F_contig1510.3615.1 vs. uniprot
Match: D8LQS5_ECTSI (Short-chain dehydrogenase/reductase SDR n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS5_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 1.720e-66
Identity = 112/145 (77.24%), Postives = 128/145 (88.28%), Query Frame = 3 
Query:  321 MVDAAIEVFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNINVKSIAWCLKYQIPAMKDTAGGQGSIIVNTSVTGLRPSALPGLAGAGMYSASKAAAEMIMKYAAIEVRRGSSGVRVNSVAPGLVETPIFGDMPVDALVAFAGAT 755
            MVD AI+ FGGLHVAFNNAGV+++ PF DI EDTIDD+LNINVKS+AWC KYQIPAMKD+AGG+GSIIVNTS T LRPSA PG+ G+GMY+ASKAAAE++MKYAAIE    +SGVRVNSVA GLV+TPIFGDMP + LVAFAGAT
Sbjct:    1 MVDTAIQKFGGLHVAFNNAGVYRSAPFADIMEDTIDDLLNINVKSLAWCFKYQIPAMKDSAGGKGSIIVNTSSTALRPSASPGMTGSGMYAASKAAAELLMKYAAIE--GAASGVRVNSVARGLVKTPIFGDMPDETLVAFAGAT 143
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BLAST of mRNA_E-fasciculatus_F_contig1510.3615.1 vs. uniprot
Match: A0A835YRJ1_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ1_9STRA)

HSP 1 Score: 211 bits (537), Expect = 8.940e-61
Identity = 118/252 (46.83%), Postives = 172/252 (68.25%), Query Frame = 3 
Query:  123 RVALVTGASSGIGKATAIAFAKEGAKVVIAARREVKLDEVAEEIKSAGGDVAVVMGDVSKEADCKKMVDAAIEVFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNINVKSIAWCLKYQIPAMKDTAGGQGSIIVNTSVTGLRPSALPGLAGAGMYSASKAAAEMIMKYAAIEVRRGSSGVRVNSVAPGLVETPIFGDMPVDALVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMK 878
            +VA+VTGASSGIG ATA   A EGAKVV+AAR + KLD+    IK+AGG+   V  D S + D K++VD A+E +G ++V+F NAG+++T    ++T+  +D++ + NVK +A+ LKYQ+ A+ + +GG+GS+++N+S  G   +A P     G Y+++KAAA+++MKYAAIE      G RVNS+APG+V T + GD P DA         L+PR   PEEIA+ V FLAS+DA+ VTG+    DGG+++K
Sbjct:    7 KVAIVTGASSGIGLATAQQMAAEGAKVVLAARGQEKLDKAVASIKAAGGEAIGVTMDASVDEDNKRLVDKALETYGAVNVSFINAGIYRTAVAAEVTKTILDELYDTNVKGVAYALKYQLAAI-EKSGGKGSVVINSSCAGGNVTAFPVFRSNGPYASTKAAADILMKYAAIEAI--DHGTRVNSIAPGVVATGL-GDFPEDAFDEMGKTVHLMPRAGRPEEIARCVCFLASDDASFVTGTVLYADGGFSLK 254
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BLAST of mRNA_E-fasciculatus_F_contig1510.3615.1 vs. uniprot
Match: A0A835YUN2_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUN2_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.010e-60
Identity = 124/258 (48.06%), Postives = 170/258 (65.89%), Query Frame = 3 
Query:  111 KLEGRVALVTGASSGIGKATAIAFAKEGAKVVIAARREVKLDEVAEEIKSAGGDVAVVMGDVSKEADCKKMVDAAIEVFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNINVKSIAWCLKYQIPAMKDTAGGQGSIIVNTSVTGLRPSALPGLAGAGMYSASKAAAEMIMKYAAIEVRRGSSGVRVNSVAPGLVETPIFGD-MPVDALVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMKA 881
            + EGRVALVTGASSG+G ATA   A EGA+VV+ AR + KL+  A +IK+AGG        VS +A  ++MV AA+  +G LHVAF NAG +   P   +TE+  + I + NVKS+A+ LK+ +PA++ + GG GS++VN+S  GLR  A P   GAG+Y+ SKAAA+MIM+YAAIE  +  +  RVNSVAPG+V T + G+ M       FA    LV R     E++ +V FLAS++A  +TGS + +DGGW +KA
Sbjct:    6 RFEGRVALVTGASSGMGLATARQLAAEGAQVVMVARTQDKLEAAAADIKAAGGXXXXXXXXVSTDAANEEMVKAALSTYGKLHVAFLNAGTYGGAPVDQVTEELFNKIFDANVKSVAFGLKHVLPAIERSGGG-GSVVVNSSCMGLRAPANPTFTGAGLYAGSKAAADMIMRYAAIEASKHKT--RVNSVAPGIVRTELMGEGMTEQGYHDFAAPVSLVGRAGTSNEVSALVCFLASDEARFITGSVHEIDGGWRLKA 260
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BLAST of mRNA_E-fasciculatus_F_contig1510.3615.1 vs. uniprot
Match: A0A835ZEC4_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC4_9STRA)

HSP 1 Score: 206 bits (525), Expect = 6.970e-59
Identity = 124/264 (46.97%), Postives = 165/264 (62.50%), Query Frame = 3 
Query:   99 MMAMKLEGRVALVTGASSGIGKATAIAFAKEGAKVVIAARREVKLDEVAEEIKSAGGDVAVVMGDVSKEADCKKMVDAAIEVFGGLHVAFNNAGVFKTVPFVD-----ITEDTIDDILNINVKSIAWCLKYQIPAMKDTAGGQGSIIVNTSVTGLRPSALPGLAGAGMYSASKAAAEMIMKYAAIEVRRGSSGVRVNSVAPGLVETPIF---GDMPVDALVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGG 866
            M A + EG+VA+VTGAS+GIG AT     +EGAKVV+ +R + KLD    EIK+  G V  +  DVSKEA  K MVD A+  +G L VAF NAG F   PF +     +T + +D +++ N KS+ +  KY +PA+ + +GG GSI+VN+S  G   SA    AG   Y+ASKAA +M++KYAA+E        RV SVAPG V TPIF   GDM    +   A A QL+ R   PEE+A+ V FL S+DA+ VTGS +++DGG
Sbjct:    1 MPAKRFEGKVAIVTGASTGIGLATTAQLVREGAKVVLVSRSQDKLDAAVAEIKAKDGQVTTLAADVSKEATNKAMVDLAMSKYGRLDVAFFNAGTFAGAPFAEASLGHVTNEMVDTVMDTNFKSVVFGFKYALPAI-EKSGGHGSIVVNSSAAGSTASAKSVCAGIAPYAASKAAVDMLVKYAAVEA--APHNTRVTSVAPGTVLTPIFQLFGDMKDSEVTDMAKAIQLMQRAGRPEEVARFVCFLLSDDASFVTGSVHSVDGG 261
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BLAST of mRNA_E-fasciculatus_F_contig1510.3615.1 vs. uniprot
Match: A0A835YQ90_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ90_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.980e-56
Identity = 111/257 (43.19%), Postives = 168/257 (65.37%), Query Frame = 3 
Query:  108 MKLEGRVALVTGASSGIGKATAIAFAKEGAKVVIAARREVKLDEVAEEIKSAGGDVAVVMGDVSKEADCKKMVDAAIEVFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNINVKSIAWCLKYQIPAMKDTAGGQGSIIVNTSVTGLRPSALPGLAGAGMYSASKAAAEMIMKYAAIEVRRGSSGVRVNSVAPGLVETPIFGDMPVDALVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMK 878
            M+  G+VA++TGASSGIG A A   A EGAKVV+AAR + +L +  + IK+AGG+   V+ D S + D K++VD  +E +G L+++F NAGV    P  ++    +D + ++NVK +A+ LKYQ+PA+ + +GG+GS+++N+S  G   +A P   G G Y+++KAA +++MKYAAIE      G RVNS+APG + T +  + P +   +      L+PR   PEEIA+ V FLAS+DA+ VTG+    DGG ++K
Sbjct:    1 MQFTGKVAIITGASSGIGLAAAQQMAAEGAKVVLAARGQDRLGKAVDSIKAAGGEAIGVVMDASIDEDNKRLVDTTLETYGSLNLSFINAGVHLAKPISEVDGSMLDKLYDVNVKGVAYALKYQLPAI-EKSGGKGSVVINSSCAGSTVTAFPIFKGNGPYASTKAAVDILMKYAAIEAI--DHGTRVNSIAPGAIYTSLV-EAPEEVFDSIGKMVHLMPRAGRPEEIARCVCFLASDDASFVTGTVMIADGGASLK 253
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1510.3615.1 vs. uniprot
Match: A0A836CAF4_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF4_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.040e-55
Identity = 113/257 (43.97%), Postives = 170/257 (66.15%), Query Frame = 3 
Query:  111 KLEGRVALVTGASSGIGKATAIAFAKEGAKVVIAARREVKLDEVAEEIKSAGGDVAVVMGDVSKEADCKKMVDAAIEVFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNINVKSIAWCLKYQIPAMKDTAGGQGSIIVNTSVTGLRPSALPGLAGAGMYSASKAAAEMIMKYAAIEVRRGSSGVRVNSVAPGLVETPIFGDMPVDALVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMKA 881
            +  GRV +VTG SSGIG ATA   A+EG KVV+AAR + +L++  + IK++GG+   V+ D SKE D K++VDA ++ +  L V+F NAG+ +    VD+T++ +D++L  NVKS+A  LKYQ+PA+  + GG G+I++N+S+ G          G G Y+A+KAAA+M+M++AA+E  +   G ++NS+APG+V+T +  D+P DA   F     ++ R   PEEIA    FL S+DA+ V G+  T DGG A+KA
Sbjct:    3 RFTGRVCVVTGGSSGIGLATAEQLAREGGKVVLAARGKERLEKAVDGIKASGGEAFGVVADASKEDDNKRLVDAVLDKYHRLDVSFINAGIHRAAKAVDVTDEMLDELLAANVKSVALGLKYQLPAIAKSGGG-GAIVINSSIAGSNVKTRKEFVGNGPYAATKAAADMLMRHAAVEASK--QGTQINSIAPGVVKTNLL-DLPDDAYEEFGKGANVMHRTGRPEEIAH---FLLSDDASFVMGTVLTADGGHALKA 252
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1510.3615.1 vs. uniprot
Match: A0A835YKB8_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB8_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.750e-55
Identity = 116/260 (44.62%), Postives = 170/260 (65.38%), Query Frame = 3 
Query:  108 MKLEGRVALVTGASSGIGKATAIAFAKEGAKVVIAARREVKLDEVAEEIKSAGGDVAVVMG---DVSKEADCKKMVDAAIEVFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNINVKSIAWCLKYQIPAMKDTAGGQGSIIVNTSVTGLRPSALPGLAGAGMYSASKAAAEMIMKYAAIEVRRGSSGVRVNSVAPGLVETPIFGDMPVDALVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMK 878
            M+  G+VA++TGASSGIG A A   A EGAKVV+AAR + +LDE    IK++   +AV +G   D S + D K++VD A+E +G L+V+F NAGV +  P  ++    +D + ++NVK +A+ LKYQ+PA+ + +GG+GS+++N+S  G   +A P   G G Y+++KAA +++MKYAAIE      G RVNS+A G V T + G  P +A         L+PR   PEEIA+ V FLAS++A+ VTG+  T DGG ++K
Sbjct:    1 MQFTGKVAIITGASSGIGLAAAQQLAAEGAKVVLAARGKERLDEAVNNIKASRRMLAVAIGVVMDASVDEDNKRLVDTALETYGLLNVSFINAGVHRAKPISEVDASMLDTLYDVNVKGVAYALKYQLPAI-EKSGGKGSVVINSSCLGSTVTAFPIFKGNGPYASTKAAVDILMKYAAIEAI--DHGTRVNSIAAGAVFTNLVG-APEEAFEEMGKMVGLMPRAGRPEEIARCVCFLASDEASFVTGTVLTADGGSSLK 256
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1510.3615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQS1_ECTSI6.680e-15593.08Short-chain dehydrogenase/reductase SDR n=1 Tax=Ec... [more]
D8LQS3_ECTSI8.610e-13280.62Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]
A0A835ZCI5_9STRA7.290e-7452.67Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
D8LQS5_ECTSI1.720e-6677.24Short-chain dehydrogenase/reductase SDR n=1 Tax=Ec... [more]
A0A835YRJ1_9STRA8.940e-6146.83Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835YUN2_9STRA1.010e-6048.06Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835ZEC4_9STRA6.970e-5946.97Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835YQ90_9STRA2.980e-5643.19Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A836CAF4_9STRA1.040e-5543.97Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835YKB8_9STRA1.750e-5544.62Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1510contigE-fasciculatus_F_contig1510:69..5114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score453.4
Seed ortholog evalue7.4e-125
Seed eggNOG ortholog2880.D8LQS1
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG0725@2759
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-24_002070.1
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1744
Cds size786
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1510.3615.1prot_E-fasciculatus_F_contig1510.3615.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1510 167..4254 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927991.0345519-UTR-E-fasciculatus_F_contig1510:68..1661622927991.0345519-UTR-E-fasciculatus_F_contig1510:68..166Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1510 69..166 +
1695995780.4343314-UTR-E-fasciculatus_F_contig1510:68..1661695995780.4343314-UTR-E-fasciculatus_F_contig1510:68..166Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1510 69..166 +
1622927991.1278896-UTR-E-fasciculatus_F_contig1510:4254..51141622927991.1278896-UTR-E-fasciculatus_F_contig1510:4254..5114Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1510 4255..5114 +
1695995780.5310977-UTR-E-fasciculatus_F_contig1510:4254..51141695995780.5310977-UTR-E-fasciculatus_F_contig1510:4254..5114Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1510 4255..5114 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927991.0478501-CDS-E-fasciculatus_F_contig1510:166..2681622927991.0478501-CDS-E-fasciculatus_F_contig1510:166..268Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1510 167..268 +
1695995780.4526181-CDS-E-fasciculatus_F_contig1510:166..2681695995780.4526181-CDS-E-fasciculatus_F_contig1510:166..268Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1510 167..268 +
1622927991.0599039-CDS-E-fasciculatus_F_contig1510:1114..12161622927991.0599039-CDS-E-fasciculatus_F_contig1510:1114..1216Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1510 1115..1216 +
1695995780.4653897-CDS-E-fasciculatus_F_contig1510:1114..12161695995780.4653897-CDS-E-fasciculatus_F_contig1510:1114..1216Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1510 1115..1216 +
1622927991.0782115-CDS-E-fasciculatus_F_contig1510:1569..17461622927991.0782115-CDS-E-fasciculatus_F_contig1510:1569..1746Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1510 1570..1746 +
1695995780.4782655-CDS-E-fasciculatus_F_contig1510:1569..17461695995780.4782655-CDS-E-fasciculatus_F_contig1510:1569..1746Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1510 1570..1746 +
1622927991.0913513-CDS-E-fasciculatus_F_contig1510:2622..27881622927991.0913513-CDS-E-fasciculatus_F_contig1510:2622..2788Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1510 2623..2788 +
1695995780.493116-CDS-E-fasciculatus_F_contig1510:2622..27881695995780.493116-CDS-E-fasciculatus_F_contig1510:2622..2788Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1510 2623..2788 +
1622927991.1026022-CDS-E-fasciculatus_F_contig1510:3339..34821622927991.1026022-CDS-E-fasciculatus_F_contig1510:3339..3482Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1510 3340..3482 +
1695995780.504407-CDS-E-fasciculatus_F_contig1510:3339..34821695995780.504407-CDS-E-fasciculatus_F_contig1510:3339..3482Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1510 3340..3482 +
1622927991.1171753-CDS-E-fasciculatus_F_contig1510:4158..42541622927991.1171753-CDS-E-fasciculatus_F_contig1510:4158..4254Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1510 4159..4254 +
1695995780.516521-CDS-E-fasciculatus_F_contig1510:4158..42541695995780.516521-CDS-E-fasciculatus_F_contig1510:4158..4254Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1510 4159..4254 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1510.3615.1

>prot_E-fasciculatus_F_contig1510.3615.1 ID=prot_E-fasciculatus_F_contig1510.3615.1|Name=mRNA_E-fasciculatus_F_contig1510.3615.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=262bp
MMAMKLEGRVALVTGASSGIGKATAIAFAKEGAKVVIAARREVKLDEVAE
EIKSAGGDVAVVMGDVSKEADCKKMVDAAIEVFGGLHVAFNNAGVFKTVP
FVDITEDTIDDILNINVKSIAWCLKYQIPAMKDTAGGQGSIIVNTSVTGL
RPSALPGLAGAGMYSASKAAAEMIMKYAAIEVRRGSSGVRVNSVAPGLVE
TPIFGDMPVDALVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGST
YTMDGGWAMKA*
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mRNA from alignment at E-fasciculatus_F_contig1510:69..5114+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1510.3615.1 ID=mRNA_E-fasciculatus_F_contig1510.3615.1|Name=mRNA_E-fasciculatus_F_contig1510.3615.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5046bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1510:69..5114+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGCCACCTTCAACAGCAGTCACCTCTCCAGCTCGGTGGGCACGGAGCTG
TTCGGTCCACACCCTCTCAAAACTCAGACATCTCCAGAGATACGTGGCAT
GATGGCCATGAAGCTTGAAGGACGTGTCGCCCTTGTTACAGGTGCATCTT
CGGGGATCGGCAAGGCTACCGCCATTGCCTTCGCGAAGGAAGGAGCCAAG
GTACGTACGTGCGCGGAGAGTGGGGCGAAACATGAATATAAACGTGGAGA
GAAAGGACGCCCCAGCTGCTCGTGTTGCGTGTTGCGTTCAGTCTTGACCC
TTTCGTTTATTGGGGACTAGACTATTTATTGCTGATGGTGATGGTGTCGA
CGAGCGAGTGAAAAATTGTTCCGCAACGTCGCGGTCGTGTAGGTAACACT
GATCGTCTCCTCTACAGAAGGGTCTATTCAGTTTAGTGGTGATGTTTTGT
GTGATGTTCGCGAGGGTTGTGCGGGCGAGCACACGCTGCAGCGATCTGCA
AGCGTAAGACTGTTCGTCAACGACGGGCTTTGGACTTTGAACGCCCAGAA
ATCACACCAAGATCACACACACAACATAGACACACACACAAGACCCAACT
GCATCGGAAATAAAAAAAGATCCGTTGCTTGTGGTCTTGCTTGGGTTCTT
TTCCACCAGAGCATGCTGCTGAACCACGCTATCTGCCTCCTCCTCCTCAT
ACCTCACCGCTCGAACCGACAGACAATATATCAACCCCGGTCTAAGTTCA
CGAGAAGAACGAGGGTGCTACACGCTTTGTTCATTTTCGAGCACCGTAAA
TGCGCGCGCAATGGCGCCCGTCAGTGATTTCGCACCCATCGGTGTAATGT
CACTGGGGTGCGCGAATTCAAACAAGAACGTACATAGTTCAATCCGCACC
GATATATATCGGTGTTATTGCACCCGGGGCGATACCACAGACAGACGTAA
ATTTTAGTGCTTCCGCAAGGTACCGGTACCCTCCGGGCCACGTTTTGAAC
TACGGGTGTGCCCATTTTCCAACATGCGTACGTGCACAATTCGCAGGTGG
TGATTGCAGCGAGGCGCGAGGTCAAGCTGGACGAGGTGGCCGAGGAAATC
AAGTCCGCCGGGGGAGACGTGGCGGTTGTGATGGGCGACGTCTCCAAGGT
GCGCGCGACAGATAGACAGAGAACGTACGTTGGGGCACTGGCATGTAACG
TAGACTATGATGCGAGCCACGGAGCCGTTTCATCGTTCATGACGCACACT
CCCGGTGGTTTGCCTTTTTATACTCTAGGCGATGCGCAACGAACTGTTGA
ACTCCAAGTCTCTCGTTTCGCGTCGCAACGCTTGCATCCAGCTTGTTTTT
CGCCCCAGTTTCTGAAAATGTAAAAGAGGGCCCCACCAGTTACGGAGGAT
CGCAGGCGAGGCCTCTTACTCGTCACGCGCCCATGTGTCACCCGCATTAG
TGCCGAATCGTTAATATTTGCTGCTTCCCTCTGTCCCGACGCACATCACA
GGAAGCGGACTGCAAAAAGATGGTGGACGCAGCGATCGAAGTGTTCGGCG
GGCTGCACGTGGCCTTCAACAACGCGGGCGTTTTCAAAACCGTTCCTTTC
GTTGACATCACCGAAGACACTATCGATGACATCCTGAACATCAACGTCAA
GTCCATCGCCTGGTGCTTGAAGTATCAGGTGTGTGTGCGAGAGAAAAAAT
TACGTCCAGCGGCGCGCACAAACAAGCGGAGCCCCGAGTTTCTCGAAATA
TTACCGAACGGGCCCGGAGAAAAGACAACAACAATCGGGTCGAGGCTCAG
TTAGTCTACTTATTTGCACGAGCACAGGTTGTTATCATGTACAAAGAGTG
CAGTCTAGGATCCACCGCTGAACTGTGTTTCTTAGCCCTGTTTTCTTGTT
TTCTTGAAATCTGAGTCTTCCAGAGTTTCTCAGCTTGCGAGCTGGTATAT
CTGAAACCCTCAGTCTACGTGAAATAGATAGACGATTATAGTTTCGATTA
CAGTTTACTTTTGTCCGCAGATAGACCGTCAAAGACACAAGCATGACGTC
TCCCCAGTGTTGTGCCATCGTTGCCGCAGTATCGTGTGTGTGTGTACGCT
CACACGATTGTGTGCGCGCATTCAACAAGTTGGCAAAATAGTTGTTCAAG
AGTCAGGTCTTAAGTCTTGATGAAAGAGGCAACAAGCTAAAACCAGCTTC
CCTCCGGCGCAACAGGGTACTACAGTACGTAGTTGCGGGCCGGTTCTGTA
ACCGTGGTATTATATTATCCATTGGCCAACCCTTCGCTGATTTTCGTTGA
CCATCCAGCTGTCGTTTTTGTTGAAACTGCTGCGTAGACCAGCAGATGTG
AGTCATAGGAGATAGATTGCTGTGCGCGATGAGCAGCTAAGTTCGTTTTT
CGTTATCAGGAATACCACTCTCAGAGTGTGGCATGCTGTTTAATTCTCAC
AACCCTGATTACGTGGGCTCAAACTGCCATTCAATTCCGCCAATAAACTG
TGCCGCGCGCTATGTTGAGGAACCGCCCACGCCGCGGCCGCTTTACCGTT
GCAGATCCCTGCCATGAAGGACACCGCAGGAGGACAGGGCTCCATCATCG
TCAACACCTCAGTCACAGGCTTGCGTCCGTCGGCCTTGCCGGGGTTGGCT
GGCGCCGGCATGTACTCGGCTTCGAAAGCGGCGGCGGAAATGATCATGAA
GTATGCCGCCATTGAGGTTCGTTGTTTTGTTTTTTCGTCCCGCCCAGACA
ATCGATTTTAATTGAGTCCTCTCGTATTCGAATCGATGCGCCACTCCAGC
ACAACGACGCACTTCATTTGCGAAACACGCACAAAGATAATACTAGAAGT
ACTTTTATTGCGACACACTGCTGCAGTGCATTTCCAAGTTGTTGGTCTTT
GGATGGCAAGTGAAAAACACGACACAGGAAATGAAGCTCTCCAACCCCAG
TCCCGAACCCGCCGAGCCATTCGGGGTGCTCTAGGTACACGACGCCCCGG
CAGGGGTTTGCCGAATAATCCCGCCCCCCACATACGGCAACACACGTCGA
GTGACGGTGGTTACGTGATGACACACCCCTGGGCACTCCAAAATGTTAAG
GCAGTGTAAAGGATGCCACCCCAATGAATGCGTCGCCTTCGGAGTCTTTA
GCATAGCTACGGTAGTTGGTATTTTGGCGCTCGAATGGTGGCATGAAAAA
TATGGATACAACCCTCCCAATTCGCGAGACTGCCCCGTGAACGTCTCTGC
ATCTGTCGCAAACCTCGACAGGGCGCGGCTCTTCGGGGGTGCGGGTGAAC
TCCGTCGCCCCTGGACTTGTGGAAACGCCCATCTTCGGCGACATGCCCGT
CGACGCTCTGGTCGCCTTCGCCGGAGCAACACAGCTAGTCCCGAGGCCCT
GTGCGCCCGAGGAGGTTAGACGCGAACTGCTGACGGTAGCGCTTTCCCCC
GCATGTACAGCAGCATTGCAAGGCCAGCTAGAAATAAATACAGTTGAGGC
ACGTCAGTCTAAGGTCCACGCTCATACTGTTTCAAGGTTTTAGCCAAGTG
CAGTCAGCCCGGTGTGGCCTGGGCGAAACCAAACGAACGGCGGACGCGGG
CGCCGCGAAGAACTACACAGGTAGTGCGGCTTCGCGCTCGTTCGTCGAGA
ACATCTTAGAAGTCTTGGTTATTGCCTCGCCGGGCATGGGGACGGATACA
TCGCCAGCATGATCCGCAACCCGGACCTACCGTTGGCGAGATATGATACC
ACACCCCCTAGACCGATTTGCAAAGCGTCACTAGTATAGAATAGAGAGAA
GTAGTGGGCCGAAATTAGTGCCGTTGGGAAGCGTGTCGTCGAGTTCGACA
ACGTATCGCTTGGTTTAACCATCCTTCTTTGTCGTGGAGTAGTCGAGGTT
GGGAAATCGGTCCACAGGGAATCTGATGTGTAATGTCACCTACGGTAAAA
CAATGAACCACTTCCATGCACACCTATGAATTCATGGGCGTTTGATTCTT
CACGTGGTTACAAAATGTCAAAGTGGTTAAATCACCTACATGCACACCTT
CTTTATCATTGGACGTTTGGTTCTCTTCACGTGGTCACAGATTGCCAAGG
TGGTGATATTCTTGGCCTCGGAGGACGCTACCATGGTCACCGGCTCCACC
TACACGATGGACGGCGGTTGGGCGATGAAAGCCTAGTTTTCCATCTCCAC
GTTTTTCTGGGCAAGCACGGAAGCAGGGTGGCGAGGGAGATCGATCGTTC
GCCCAGAGCCAGGCTTTGATGTTCACATTCGAAAAAAAGTATTAGTCAAA
ATTGGGAGCTGAGATGTTTGAGATCCGGGTTGCGGTGGAGTAGTTGAACG
CATGGGTGGGCTCGAACCCCTCTCATTCAAGACATCGTATGTTTTTGCCG
TAGACTATATCCTTTCGAACACAGTGAGCTGATCCTGGCCGTGCTTCGCT
ACTACTGTCAATTCTAGTGTAGGCAGCAAATCGAGGTTCGTACCTATCCT
ACATCTAGAGCGGTATCGGTGTGGCAATGCCCCAGGATTAGGGAAGGTCA
AGAAAGCCTTTTTGGAAGGGGGGTCTGGTGACTGACATATATATGTGGTG
TGGGCCTTGGCGTAAACAGGCTGACGTTGGCGCAATAAACAGAGGTTGGC
GGGGAGAAGGGGATCGTCTCTATGCGGTTTTCTTCTGCCCCTCTACCGGG
TAAAGTCACGCGTTTATGAAGCAATTCGTTCCCTGTTTCGGCATGACATC
TAGTCATCGGAAACTCACTTGTGGTTTAGATTTTTTCTTCCGAACATGGT
GTTCTGGTACCTTGGTGGGGGCGTTTTACCTGAAAAGGTTGGTTGAATAA
AATATTTGAGCATGATTTCTACTCATCGCGTTGAGGCGCACGTTTATTTC
CGAGTGTCAGCGACTCGAGAAACTCGTCGGAGAGCAAGCATGATGGTGTG
TGCGTAGGAACCGAGACGCTGTTGCCTGGCGACACTTCGAGTTTGTTCGG
ATAGGTAAGAACAAATGGAGGAGATTGGGTATCTGTCAGCAATTTG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1510:69..5114+

>mRNA_E-fasciculatus_F_contig1510.3615.1 ID=mRNA_E-fasciculatus_F_contig1510.3615.1|Name=mRNA_E-fasciculatus_F_contig1510.3615.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1572bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1510:69..5114+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGATGGCCATGAAGCTTGAAGGACGTGTCGCCCTTGTTACAGGTGCATC
TTCGGGGATCGGCAAGGCTACCGCCATTGCCTTCGCGAAGGAAGGAGCCA
AGATGATGGCCATGAAGCTTGAAGGACGTGTCGCCCTTGTTACAGGTGCA
TCTTCGGGGATCGGCAAGGCTACCGCCATTGCCTTCGCGAAGGAAGGAGC
CAAGGTGGTGATTGCAGCGAGGCGCGAGGTCAAGCTGGACGAGGTGGCCG
AGGAAATCAAGTCCGCCGGGGGAGACGTGGCGGTTGTGATGGGCGACGTC
TCCAAGGTGGTGATTGCAGCGAGGCGCGAGGTCAAGCTGGACGAGGTGGC
CGAGGAAATCAAGTCCGCCGGGGGAGACGTGGCGGTTGTGATGGGCGACG
TCTCCAAGGAAGCGGACTGCAAAAAGATGGTGGACGCAGCGATCGAAGTG
TTCGGCGGGCTGCACGTGGCCTTCAACAACGCGGGCGTTTTCAAAACCGT
TCCTTTCGTTGACATCACCGAAGACACTATCGATGACATCCTGAACATCA
ACGTCAAGTCCATCGCCTGGTGCTTGAAGTATCAGGAAGCGGACTGCAAA
AAGATGGTGGACGCAGCGATCGAAGTGTTCGGCGGGCTGCACGTGGCCTT
CAACAACGCGGGCGTTTTCAAAACCGTTCCTTTCGTTGACATCACCGAAG
ACACTATCGATGACATCCTGAACATCAACGTCAAGTCCATCGCCTGGTGC
TTGAAGTATCAGATCCCTGCCATGAAGGACACCGCAGGAGGACAGGGCTC
CATCATCGTCAACACCTCAGTCACAGGCTTGCGTCCGTCGGCCTTGCCGG
GGTTGGCTGGCGCCGGCATGTACTCGGCTTCGAAAGCGGCGGCGGAAATG
ATCATGAAGTATGCCGCCATTGAGGTTCATCCCTGCCATGAAGGACACCG
CAGGAGGACAGGGCTCCATCATCGTCAACACCTCAGTCACAGGCTTGCGT
CCGTCGGCCTTGCCGGGGTTGGCTGGCGCCGGCATGTACTCGGCTTCGAA
AGCGGCGGCGGAAATGATCATGAAGTATGCCGCCATTGAGGTTCGGCGCG
GCTCTTCGGGGGTGCGGGTGAACTCCGTCGCCCCTGGACTTGTGGAAACG
CCCATCTTCGGCGACATGCCCGTCGACGCTCTGGTCGCCTTCGCCGGAGC
AACACAGCTAGTCCCGAGGCCCTGTGCGCCCGAGGAGGGCGCGGCTCTTC
GGGGGTGCGGGTGAACTCCGTCGCCCCTGGACTTGTGGAAACGCCCATCT
TCGGCGACATGCCCGTCGACGCTCTGGTCGCCTTCGCCGGAGCAACACAG
CTAGTCCCGAGGCCCTGTGCGCCCGAGGAGATTGCCAAGGTGGTGATATT
CTTGGCCTCGGAGGACGCTACCATGGTCACCGGCTCCACCTACACGATGG
ACGGCGGTTGGGCGATGAAAGCCTAGATTGCCAAGGTGGTGATATTCTTG
GCCTCGGAGGACGCTACCATGGTCACCGGCTCCACCTACACGATGGACGG
CGGTTGGGCGATGAAAGCCTAG
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