mRNA_E-fasciculatus_F_contig15057.3583.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15057.3583.1 vs. uniprot
Match: D7FX98_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX98_ECTSI) HSP 1 Score: 291 bits (744), Expect = 1.080e-89 Identity = 166/189 (87.83%), Postives = 175/189 (92.59%), Query Frame = 1
Query: 1 VLANLLVDLLKEDLNEELYMASEAGLGLNLYLTKEALCLSLGGYSHKMKVLLERVVHRLASFGDTLAQEEEDSSNDANKTTGDANSNXXXXXXXXXXXXXXGSLFQRMRQKLLKKYKNDEFNTPYQHAVSATQCCMEAPRWNNDDRLKVMEGPGITVSAMLAFVPRLLSVLYMEMLVHGNATATEVMGL 567
VLANLLVDLLKEDLNEELYMASEAGLGLNLYLTKEALCLSLGGYSHKMKVLLERVVHRL SFGDTLAQ++EDS++D KTTGDA SN XXXXXXXXXX SLFQRMRQKLLK+YKN++FNTPYQHAVSATQ CME PRWNN+DRLK MEGPGITV AMLAFVPRLLSVLYMEMLVHGNATATE +GL
Sbjct: 569 VLANLLVDLLKEDLNEELYMASEAGLGLNLYLTKEALCLSLGGYSHKMKVLLERVVHRLGSFGDTLAQDKEDSNDD--KTTGDAISNGDANXXXXXXXXXX-SLFQRMRQKLLKRYKNEQFNTPYQHAVSATQSCMEVPRWNNEDRLKAMEGPGITVPAMLAFVPRLLSVLYMEMLVHGNATATEALGL 754
BLAST of mRNA_E-fasciculatus_F_contig15057.3583.1 vs. uniprot
Match: A0A7S2C2V4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C2V4_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 4.770e-15 Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 307 SLFQRMRQKLLKKYKNDEFNTPYQHAVSATQCCMEAPRWNNDDRLKVMEGPGITVSAMLAFVPRLLSVLYMEMLVHGNATATE 555
++F+R++ K+ K YKN FN PYQHA+ C+E PR++ DDRL +E +T++ + AF PRLL +E LVHGNAT E
Sbjct: 50 AVFERLKDKVRKGYKNFAFNQPYQHAIFNQSLCLEYPRYDYDDRLAALEP--LTLADLAAFGPRLLKRCKIECLVHGNATRDE 130
BLAST of mRNA_E-fasciculatus_F_contig15057.3583.1 vs. uniprot
Match: A0A448YH48_BRENA (DEKNAAC100968 n=1 Tax=Brettanomyces naardenensis TaxID=13370 RepID=A0A448YH48_BRENA) HSP 1 Score: 72.8 bits (177), Expect = 1.390e-11 Identity = 52/189 (27.51%), Postives = 85/189 (44.97%), Query Frame = 1
Query: 1 VLANLLVDLLKEDLNEELYMASEAGLGLNLYLTKEALCLSLGGYSHKMKVLLERVVHRLASFGDTLAQEEEDSSNDANKTTGDANSNXXXXXXXXXXXXXXGSLFQRMRQKLLKKYKNDEFNTPYQHAVSATQCCMEAPRWNNDDRLKVMEGPGITVSAMLAFVPRLLSVLYMEMLVHGNAT---ATEV 558
VL +L ++LL +DLN Y+A+ AGL + ++ + L + GYSHK++VLLE+++ RL F D E + F+ +R+K+LK KN ++ PY + W DD+L V + I + F L + ++E+L GN + ATE+
Sbjct: 583 VLLSLFIELLDDDLNSLSYLATIAGLSHEFNMARDGISLEIQGYSHKLQVLLEKLIERLIKFTDPAYASE-------------------------VWNDDRRARFEVLREKMLKNLKNFGYSVPYNQVGPMLSSLINENSWLIDDQLAVYDA--INFDTLRNFSTNLFDICFIEVLAIGNCSKKQATEI 744
BLAST of mRNA_E-fasciculatus_F_contig15057.3583.1 vs. uniprot
Match: A0A7S3PUA9_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUA9_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 2.470e-9 Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 307 SLFQRMRQKLLKKYKNDEFNTPYQHAVSATQCCMEAPRWNNDDRLKVMEGPGITVSAMLAFVPRLLSVLYMEMLVHGNATATE 555
SLF+R++ K+ K+YKN F PYQHA A +E+ +W +D++ ++ I + +L F R+L + EMLVHGN +A E
Sbjct: 618 SLFERVKDKVSKQYKNFMFAQPYQHAFYAADLLLESTKWTIEDKMSALDS--IEMCDVLDFSRRILGRFHTEMLVHGNVSADE 698
BLAST of mRNA_E-fasciculatus_F_contig15057.3583.1 vs. uniprot
Match: A0A1Z5J9K8_FISSO (Insulysin n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9K8_FISSO) HSP 1 Score: 64.3 bits (155), Expect = 1.130e-8 Identity = 30/87 (34.48%), Postives = 55/87 (63.22%), Query Frame = 1
Query: 310 LFQRMRQKLLKKYKNDEFNTPYQHAVSATQCCMEAPRWNNDDRLKVMEGPGITVSAMLAFVPRLLSVLYMEMLVHGNA---TATEVM 561
+F+R+ KL ++Y +PY+HA++ C++A +WN +DRL++++ ++++ + F +L+ Y+E LVHGNA TA E M
Sbjct: 624 VFERVSHKLEQRYLAFMMGSPYRHAMNGADLCLDAEKWNVEDRLELLQSKSLSLNDTIHFHRQLMGSFYLEALVHGNAEPPTALEWM 710
BLAST of mRNA_E-fasciculatus_F_contig15057.3583.1 vs. uniprot
Match: B7GEM5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GEM5_PHATC) HSP 1 Score: 63.9 bits (154), Expect = 1.550e-8 Identity = 32/86 (37.21%), Postives = 54/86 (62.79%), Query Frame = 1
Query: 310 LFQRMRQKLLKKYKNDEFNTPYQHAVSATQCCMEAPRWNNDDRLKVMEGPGITVSAMLAFVPRLLSVLYMEMLVHGNATATEVMGL 567
LF+R++ KL ++++ PYQHA+ A C+E P+W+ DRL+ + +T++ + F +L+ +EMLVHGN TA+E + L
Sbjct: 652 LFERIQSKLEQQFQEFLVAQPYQHAIYAGDLCLETPKWDIHDRLQCLAS--LTLNDLQHFGRHILARFQLEMLVHGNVTASEAVQL 735
BLAST of mRNA_E-fasciculatus_F_contig15057.3583.1 vs. uniprot
Match: A0A482S1N9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1N9_9ARCH) HSP 1 Score: 63.2 bits (152), Expect = 2.520e-8 Identity = 49/177 (27.68%), Postives = 76/177 (42.94%), Query Frame = 1
Query: 28 LKEDLNEELYMASEAGLGLNLYLTKEALCLSLGGYSHKMKVLLERVVHRLASFGDTLAQEEEDSSNDANKTTGDANSNXXXXXXXXXXXXXXGSLFQRMRQKLLKKYKNDEFNTPYQHAVSATQCCMEAPRWNNDDRLKVMEGPGITVSAMLAFVPRLLSVLYMEMLVHGNATATEV 558
L E L+E Y A AG+ + + + +S GYS K+ +L+ER Q SS + +A LF R+++K+L+ YKN F+ PY H + + C+E PRW+ ++ ++ T+S F L E+LV GN T EV
Sbjct: 265 LNEVLSEYSYYADCAGISFGISTSPGGISMSAQGYSDKLALLIERA----------CTQARRVSSGPTDNPVNEA-------------------LFLRVKEKVLRSYKNYLFSQPYNHCILSNSLCLEDPRWSYFEKYAALKEA--TLSTFYMFATEFLKYGKPEILVTGNCTIDEV 410
BLAST of mRNA_E-fasciculatus_F_contig15057.3583.1 vs. uniprot
Match: A0A875SDC6_EENNA (Uncharacterized protein n=1 Tax=Eeniella nana TaxID=13502 RepID=A0A875SDC6_EENNA) HSP 1 Score: 63.2 bits (152), Expect = 2.870e-8 Identity = 45/180 (25.00%), Postives = 79/180 (43.89%), Query Frame = 1
Query: 1 VLANLLVDLLKEDLNEELYMASEAGLGLNLYLTKEALCLSLGGYSHKMKVLLERVVHRLASFGDTLAQEEEDSSNDANKTTGDANSNXXXXXXXXXXXXXXGSLFQRMRQKLLKKYKNDEFNTPYQHAVSATQCCMEAPRWNNDDRLKVMEGPGITVSAMLAFVPRLLSVLYMEMLVHGN 540
+L +L ++LL +DL+ Y+A+ AGL + ++ + L + GYSHK+++LLER++ R+ F D E + F+ +R+K+ K KN ++ PY + W D+L V E + + F L +V ++E+L GN
Sbjct: 583 LLLSLFIELLDDDLSSVSYLAAIAGLSQEFNMARDGITLEIHGYSHKLEILLERLIDRVIKFTDPAFTAE-------------------------IWDEDRKARFEVLREKVSKNLKNFGYSVPYNQVGPMISSLINENSWLVADQLAVYEA--VNFDTLRNFSANLFNVCFIEVLALGN 735
BLAST of mRNA_E-fasciculatus_F_contig15057.3583.1 vs. uniprot
Match: A0A438JL13_VITVI (Insulin-degrading enzyme-like 1, peroxisomal n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JL13_VITVI) HSP 1 Score: 60.5 bits (145), Expect = 1.710e-7 Identity = 50/185 (27.03%), Postives = 80/185 (43.24%), Query Frame = 1
Query: 1 VLANLLVDLLKEDLNEELYMASEAGLGLNLYLTKEALCLSLGGYSHKMKVLLERVVHRLASFGDTLAQEEEDSSNDANKTTGDANSNXXXXXXXXXXXXXXGSLFQRMRQKLLKKYKNDEFNTPYQHAVSATQCCMEAPRWNNDDRLKVMEGPGITVSAMLAFVPRLLSVLYMEMLVHGNATATE 555
VL ++ LL + LNE+ Y A AGL L T +++ GY+HK+++LLE VV ++A+F K D + + ++ + K Y+N +F PYQ A+ + W D L+V+ P + + FVP LLS ++E + GN E
Sbjct: 82 VLTDIFTRLLMDYLNEDAYYAEVAGLYYCLSNTDSGFQVAMAGYNHKLRILLETVVKKIANF----------------KVKPDR---------FLVIKVMINTSYATGKELVTKGYQNVKFQQPYQQAMCYRSLILHDNTWPWMDGLEVI--PHLEADDLAKFVPMLLSRAFLECYIAGNIEPKE 239
BLAST of mRNA_E-fasciculatus_F_contig15057.3583.1 vs. uniprot
Match: A0A7S2L3H0_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L3H0_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.760e-7 Identity = 31/84 (36.90%), Postives = 56/84 (66.67%), Query Frame = 1
Query: 307 SLFQRMRQKLLKKYKNDEFNT-PYQHAVSATQCCMEAPRWNNDDRLKVMEGPGITVSAMLAFVPRLLSVLYMEMLVHGNATATE 555
+LF+R++ K+ K+Y+N + PYQHA+ CME +++ D+++ + +T S + AF RLLS +++E+LVHGN++ +E
Sbjct: 643 NLFERIKDKVSKRYQNFLLGSQPYQHAIYGMDLCMEVNKFSMFDKIEAISQ--LTTSDLKAFSKRLLSRVFVEILVHGNSSPSE 724 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15057.3583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15057.3583.1 >prot_E-fasciculatus_F_contig15057.3583.1 ID=prot_E-fasciculatus_F_contig15057.3583.1|Name=mRNA_E-fasciculatus_F_contig15057.3583.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=189bp VLANLLVDLLKEDLNEELYMASEAGLGLNLYLTKEALCLSLGGYSHKMKVback to top mRNA from alignment at E-fasciculatus_F_contig15057:84..2740+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15057.3583.1 ID=mRNA_E-fasciculatus_F_contig15057.3583.1|Name=mRNA_E-fasciculatus_F_contig15057.3583.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2657bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15057:84..2740+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15057:84..2740+ >mRNA_E-fasciculatus_F_contig15057.3583.1 ID=mRNA_E-fasciculatus_F_contig15057.3583.1|Name=mRNA_E-fasciculatus_F_contig15057.3583.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1134bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15057:84..2740+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |