prot_E-fasciculatus_F_contig15022.3561.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15022.3561.1
Unique Nameprot_E-fasciculatus_F_contig15022.3561.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length166
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15022.3561.1 vs. uniprot
Match: D8LJW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJW3_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 3.420e-47
Identity = 81/86 (94.19%), Postives = 82/86 (95.35%), Query Frame = 0 
Query:   80 MGYQLDLDRSCLITASDVDIPIDSVTGLPVVCQWFCDSCSSTVTGVVAATAGRRQQRRLAVAAGLSTPKSKKSKNGKHSSTRKAER 165
            MGYQLDLDRSCLITASDVDIPIDSVTGLPVVCQWFCDSCSSTVTGVVAATAGRRQQRRLAVAAGLSTPKSKK K GKH+ TRK ER
Sbjct:    1 MGYQLDLDRSCLITASDVDIPIDSVTGLPVVCQWFCDSCSSTVTGVVAATAGRRQQRRLAVAAGLSTPKSKKGKKGKHAPTRKTER 86
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15022.3561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJW3_ECTSI3.420e-4794.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 4..124
e-value: 3.8E-6
score: 28.8
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 21..118
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 18..121
score: 8.529

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15022contigE-fasciculatus_F_contig15022:1374..2330 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15022.3561.1mRNA_E-fasciculatus_F_contig15022.3561.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15022 1300..2497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15022.3561.1 ID=prot_E-fasciculatus_F_contig15022.3561.1|Name=mRNA_E-fasciculatus_F_contig15022.3561.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=166bp
MVDTTPQEPDKSAGDDQSSACEICGGKEEGGGSAAAPDTGSSSSTSAATT
TQQQQRQHRQEDSFALRCNCCRRWYHPWCMGYQLDLDRSCLITASDVDIP
IDSVTGLPVVCQWFCDSCSSTVTGVVAATAGRRQQRRLAVAAGLSTPKSK
KSKNGKHSSTRKAER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR013083Znf_RING/FYVE/PHD