mRNA_E-fasciculatus_F_contig150.3543.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig150.3543.1 vs. uniprot
Match: A0A6H5JKQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ4_9PHAE) HSP 1 Score: 640 bits (1651), Expect = 6.690e-222 Identity = 311/368 (84.51%), Postives = 329/368 (89.40%), Query Frame = 1
Query: 1 PVLWKGRCSPRRRPIAVVLRKGCLVVIGLTSLLAYWSRGGTFSTRGPTAAQKTAADPRTAERNG----ELTSREGGVGDGSGVVPLNATGALVELKLPRHFDGALALKSEKIVYCPIQKKVACTEWIKVLRWIDGHEDWAEPRHQKHGLGVLEEMGVQRGNQLLNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEYGNCPYLELWPGLFGRERFPDGVPTRPDVDTLAVVWEAFTSRGRDSMFAPYVEAITRRIKQNPCGQNKHWSPQYCHCSLDVTAPVYRIVGWSNMTEAASAAIVPFASSRARGLEIEGFLVDRMNTNHERSGKKTSAGSRGLEAYTAEALQAVHEAYAKDYELFSQYWDGN 1092
PV WK RCSPRR AVVLRKGCLV+IGL SLLAYWSR GTFSTRGPTAA+KT PRTAE +G LT+ G GD +GVVP + TGALVEL+LPRHFDGALALKSE+IVYCPIQK VACTEWIKV RWIDGHEDWAEPRHQKHGL VLEEM V+RGNQ+LNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEY NCPYLELWP LF RERFPDGVPTRP VDTLA+VWEAFTSRGRDSMFAPYVE ITRR+KQ+PCGQNKHWSPQYCHCSLDVTAPV+RIVGW+NMTEAASAAIVPFASS ARGLEI+ FLVDRM+TNHER GKKTSAGSR EAYTAEALQAVHEAYAKDY+LFSQYW N
Sbjct: 4 PVCWKDRCSPRRWLNAVVLRKGCLVLIGLASLLAYWSRRGTFSTRGPTAAEKTPEVPRTAEGHGVAVGALTNGGGEGGDRNGVVPSDVTGALVELELPRHFDGALALKSERIVYCPIQK-VACTEWIKVFRWIDGHEDWAEPRHQKHGLDVLEEMDVERGNQILNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEYSNCPYLELWPDLFDRERFPDGVPTRPGVDTLAIVWEAFTSRGRDSMFAPYVEVITRRVKQDPCGQNKHWSPQYCHCSLDVTAPVFRIVGWANMTEAASAAIVPFASSSARGLEIKEFLVDRMDTNHERHGKKTSAGSRSQEAYTAEALQAVHEAYAKDYKLFSQYWVEN 370
BLAST of mRNA_E-fasciculatus_F_contig150.3543.1 vs. uniprot
Match: D8LBQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBQ5_ECTSI) HSP 1 Score: 228 bits (580), Expect = 1.280e-66 Identity = 108/125 (86.40%), Postives = 115/125 (92.00%), Query Frame = 1
Query: 721 MFAPYVEAITRRIKQNPCGQNKHWSPQYCHCSLDVTAPVYRIVGWSNMTEAASAAIVPFASSRARGLEIEGFLVDRMNTNHERSGKKTSAGSRGLEAYTAEALQAVHEAYAKDYELFSQYWDGNS 1095
MFA YV+ ITRRIKQ+PCGQNKHWSPQYCHCSLDVTAPV+RIVGW+NMTE ASAAIVPFASS ARGLEI+ FLVDRM+TNHER GKKTSAGSR EAYT EALQAVHEAYAKDYELFSQYWD N+
Sbjct: 1 MFALYVDVITRRIKQDPCGQNKHWSPQYCHCSLDVTAPVFRIVGWANMTEVASAAIVPFASSPARGLEIKEFLVDRMDTNHERHGKKTSAGSRSQEAYTTEALQAVHEAYAKDYELFSQYWDENN 125
BLAST of mRNA_E-fasciculatus_F_contig150.3543.1 vs. uniprot
Match: D7G2B9_ECTSI (Similar to dermatan 4-sulfotransferase-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B9_ECTSI) HSP 1 Score: 151 bits (381), Expect = 2.600e-37 Identity = 96/270 (35.56%), Postives = 138/270 (51.11%), Query Frame = 1
Query: 298 ALALKSEKIVYCPIQKKVACTEWIKVLRWIDGHEDW-AEPRHQ--KHGLGVLEEMGVQRGNQLLNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEYGNCPYLELWPGLFGRERFPDGVPTRPDVDTLAVVWEAFTSRGRDSMFAPYVEAITRRIKQNPCGQNKHWSPQYCHCSLDVTAPVYRIVGWSNM-TEAASAAIVPFASSRARGLEIEGFLVDRMNTNHERSGKKTSAGSRGLEAYTAEALQAVHEAYAKDYELFSQYWDGNS 1095
A+ + ++ ++YCPI K VAC EW K LRW+ G DW P H K+G+ +L + ++N WLKF VVR+PA RLLS FL KC + E+ NCPY E P +RFP GV R D T A R +F ++ + R ++ C N HW PQ+C CS+ Y +V ++NM TEA + S R + F+V R ++N + K A S+ ++ EAL + Y KDY LF +Y++ +S
Sbjct: 4 AMYVPADGMIYCPIAK-VACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKC----LGGEWQNCPYTEFMP-----QRFP-GVSKR-DAATDTKFRAAMNDEPR-KVFRDFMLGVRRDVRLTGCKVNSHWRPQHCFCSIARFRESYHVVPFANMSTEAVNLVDHMRRPSPDRAELLREFIVQRFSSNQD--AKAQGATSKRERYFSQEALDVIKMVYGKDYSLFGEYFEEHS 258
BLAST of mRNA_E-fasciculatus_F_contig150.3543.1 vs. uniprot
Match: A0A6H5JC58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC58_9PHAE) HSP 1 Score: 122 bits (307), Expect = 9.230e-26 Identity = 72/193 (37.31%), Postives = 101/193 (52.33%), Query Frame = 1
Query: 298 ALALKSEKIVYCPIQKKVACTEWIKVLRWIDGHEDW-AEPRHQ--KHGLGVLEEMGVQRGNQLLNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEYGNCPYLELWPGLFGRERFPDGVPTRPDVDTLAVVWEAFTSRGRDSMFAPYVEAITRRIKQNPCGQNKHWSPQYCHCSLDVTAPVYRIVGWSNMT 867
A+ + + ++YCPI K VAC EW K LRW+ G DW P H K+G+ +L + ++N WLKF VVR+PA RLLS FL KC + E+ NCPY E P +RFP GV R D T A R +F ++ + + ++ C N HW PQ+C CS+ Y +V ++NM+
Sbjct: 169 AMYVPGDGMIYCPIAK-VACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKC----LGGEWQNCPYTEFMP-----QRFP-GVSKR-DAATDTKFRAAINDEPR-KVFRDFMLGVQKDVRLRGCKVNSHWRPQHCFCSIARFRESYHVVPFANMS 348
BLAST of mRNA_E-fasciculatus_F_contig150.3543.1 vs. uniprot
Match: D8LPX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX9_ECTSI) HSP 1 Score: 119 bits (297), Expect = 5.200e-25 Identity = 96/324 (29.63%), Postives = 138/324 (42.59%), Query Frame = 1
Query: 277 LPRHFDGALALKSEKIVYCPIQKKVACTEWIKVLRWIDGHEDWAEPRHQKH-----GLGVLEEMGVQRGNQLLNSPDWLKFAVVREPAQRLLSCFLQKC-------NRYNMENEYGNCPYLELWPGLFGRERFPDGVPTRPDVDTLAVVWEAFTSRGRDSMFAPYVEAITRRIKQ--NPCG-QNKHWSPQYCHCSLDVTAPVYRIVGWSNMTE--AASAAIVP--------------------------------------FASSRARGLEIEGFLVDRMNTNHERSGKKTSAGSRGLEAYTAEALQAVHEAYAKDYELFSQYW 1083
LP+ + L+ E I+YCPI K VA EW + LRW+ G EDW H GL L+E G++ L S + +F VVR+PA+RL+S FL KC R N + NC YL L P LF P+ T +DT + + R + F + I +K+ + C N H+ PQ C C L P + ++ + NM+ AA AA +P S +R EI FL +R T ++ K T A R + L+ VH+ + +DYE+ QY+
Sbjct: 57 LPK-MKNVVILRGEGIIYCPIAK-VASAEWKRSLRWMVGIEDWMGNHTNLHSAGKNGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGA-PNCAYLSLMPTLF-----PNA--TEATLDTHQTLRD-LVEREPEDTFYHFASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVIPFHNMSAEAAAFAARIPEPLPISPHKEATDGGTAGISKSSIGKDGPGGMAQGGRGTGVSGSRRQEIADFLTERFETARDKDVKVTGAADRKNMFLSNRVLRVVHQMFKEDYEVLGQYF 369
BLAST of mRNA_E-fasciculatus_F_contig150.3543.1 vs. uniprot
Match: D8LBQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBQ6_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 4.730e-20 Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 1
Query: 451 MGVQRGNQLLNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEYGNCPY 600
M VQRGNQ+LNSPDWLKFAVVREPAQRLLSCFLQKCN+YNMENEY +
Sbjct: 1 MDVQRGNQILNSPDWLKFAVVREPAQRLLSCFLQKCNQYNMENEYSTLAF 50
BLAST of mRNA_E-fasciculatus_F_contig150.3543.1 vs. uniprot
Match: A0A5J4YVB4_PORPP (Carbohydrate sulfotransferase 14 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVB4_PORPP) HSP 1 Score: 80.9 bits (198), Expect = 4.130e-12 Identity = 70/277 (25.27%), Postives = 116/277 (41.88%), Query Frame = 1
Query: 268 ELKLPRHFDGALALKSEKIVYCPIQKKVACTEWIKVLRWIDGHEDWAE----PRHQKHGLGVLEEMGVQRGNQLLNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEYGNCPYLELWPGLFGRERFPDGVPTRPDVDTLAVVWEAFTSRGRDSMFAPYVEAITRRIK-QNPCGQNKHWSPQYCHCSLDVTAPVYRIVG-WSNMTEAASAAIVPFASSRARGLEIEGFLVDRMNTNHERSGKKTSAGSRGLEAYTAEALQAVHEAYAKDYELFSQY 1080
EL+ + + + +++YCP+ K VA + + ++R +G ED+A+ + GL L V+ L+ P +LKF VR P R+LSC+L K + ++E Y L+G W T R S P + I Q+P N+HW+ Q CSLDV Y VG + NM+ A A +V L+ G +++R + + A + + Y+ + ++ V YA D+ +Y
Sbjct: 244 ELRASAAANRIIVSEKSRLIYCPVPK-VANSNFKMLIRKFEGFEDYADLLTAHSRARSGLRFLSSYSVEEVEALMKDPTFLKFVFVRNPLDRVLSCYLNKIVNKDPKSE----EYATYLGQLYG--------------------WRFLTQRDYKSERKPSFQEFVNAISLQSPWQMNEHWALQSFLCSLDVFP--YDFVGRFENMS--ADAELV---------LQAVGRVLERFPSQKDIKFLANEASKKINKYYSPQIMERVRNTYACDFRSMPEY 482
BLAST of mRNA_E-fasciculatus_F_contig150.3543.1 vs. uniprot
Match: A0A7S2ZL45_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZL45_9RHOD) HSP 1 Score: 76.6 bits (187), Expect = 5.150e-11 Identity = 47/173 (27.17%), Postives = 81/173 (46.82%), Query Frame = 1
Query: 319 KIVYCPIQKKVACTEWIKVLRWIDGHEDWAEPR--HQK--HGLGVLEEMGVQRGNQLLNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEYGNCPYLELWPGLFGRERFPDGVPTRPDVDTLAVVWEAFTSRGRDSMFAPYVEAITRRI-KQNPCGQNKHWSPQYCHCSLD 822
K +YCP+ K +AC+ W + R ++G +D+ H K GL L++ + +++ P+WLKF VR+PA RLLS +L K +R +++ +++ + L G + + V +F P E + +QN N+HW+PQ C +D
Sbjct: 213 KAMYCPLPK-IACSNWKSLFRKLEGFKDYKNLALAHDKANSGLKYLKDYTEEEALKMVQDPEWLKFVFVRDPASRLLSAYLDKFDRRELDSP----EFIKFFDQLLGFQYRKNAV----------------------ELFMPSFEEFIMYVGRQNDFDMNEHWAPQVYLCQMD 358
BLAST of mRNA_E-fasciculatus_F_contig150.3543.1 vs. uniprot
Match: A0A7S3ED89_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ED89_9RHOD) HSP 1 Score: 76.6 bits (187), Expect = 1.030e-10 Identity = 47/173 (27.17%), Postives = 81/173 (46.82%), Query Frame = 1
Query: 319 KIVYCPIQKKVACTEWIKVLRWIDGHEDWAEPR--HQK--HGLGVLEEMGVQRGNQLLNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEYGNCPYLELWPGLFGRERFPDGVPTRPDVDTLAVVWEAFTSRGRDSMFAPYVEAITRRI-KQNPCGQNKHWSPQYCHCSLD 822
K +YCP+ K +AC+ W + R ++G +D+ H K GL L++ + +++ P+WLKF VR+PA RLLS +L K +R +++ +++ + L G + + V +F P E + +QN N+HW+PQ C +D
Sbjct: 213 KAMYCPLPK-IACSNWKSLFRKLEGFKDYKNLALAHDKANSGLKYLKDYTEEEALKMVQDPEWLKFVFVRDPASRLLSAYLDKFDRRELDSP----EFIKFFDQLLGFQYRKNAV----------------------ELFMPSFEEFIMYVGRQNDFDMNEHWAPQVYLCQMD 358
BLAST of mRNA_E-fasciculatus_F_contig150.3543.1 vs. uniprot
Match: F0Y5E9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5E9_AURAN) HSP 1 Score: 75.1 bits (183), Expect = 1.100e-10 Identity = 73/311 (23.47%), Postives = 116/311 (37.30%), Query Frame = 1
Query: 319 KIVYCPIQKKVACTEWIKVLRWIDG---HEDWAEPRHQKHGLGVLEE-MGVQRGNQLLNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEYGNCPYLELWPGLFGRERFPDGVPTRPDVDTLAVVWEAFTSRGRDSMFAPYVEAIT--RRIKQNPCG----QNKHWSPQYCHCSLDVTAPVYRIVG------------------W-----SNMTEAASAAIVPFASSRARGLEIEGFLVDRMNTNHERSGKKTSAGSRGLEAYTAEALQAVHEAYAKDYELFSQY-WDGNS*TLRRSWEEGRLPSHSTV 1149
K++YC + K VACTE++++ + G ++ W H + + + M V L+N P W KFA R+PA+RLLS +L K + Y G + F D + F+ +V+ I R++ P G N HW PQ C+++ P Y VG W + T+A +V G + G + + H+ T + YT E L V AYA DYE+F + G+ +W + + T+
Sbjct: 50 KLLYCAVPK-VACTEFMRLFFRLKGENQNQRWKGDPHFRQDKPLFNKIMNVTTATALMNDPTWTKFAFWRDPAERLLSAYLDK---FANGKRYST--------GSYAVRIFKD----------------------KHMNFSGFVDRIASKNRVRGKPDGLHPNTNPHWRPQRFMCNMEKFLPAYNFVGSFDHLGDHAEKLLRALGLWEAYGAAGWTKALKRTVVDKIKGAVGGGDDGGRMFQKNAAWHQ----TTKMKPENHDLYTPELLAKVRRAYAMDYEMFDAVGFGGDEPASGANWGDAKYAGRQTM 322 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig150.3543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig150.3543.1 >prot_E-fasciculatus_F_contig150.3543.1 ID=prot_E-fasciculatus_F_contig150.3543.1|Name=mRNA_E-fasciculatus_F_contig150.3543.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=216bp MGVQRGNQLLNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEYGNCPYback to top mRNA from alignment at E-fasciculatus_F_contig150:4956..13363- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig150.3543.1 ID=mRNA_E-fasciculatus_F_contig150.3543.1|Name=mRNA_E-fasciculatus_F_contig150.3543.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8408bp|location=Sequence derived from alignment at E-fasciculatus_F_contig150:4956..13363- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig150:4956..13363- >mRNA_E-fasciculatus_F_contig150.3543.1 ID=mRNA_E-fasciculatus_F_contig150.3543.1|Name=mRNA_E-fasciculatus_F_contig150.3543.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1296bp|location=Sequence derived from alignment at E-fasciculatus_F_contig150:4956..13363- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |