prot_E-fasciculatus_F_contig15.3541.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig15.3541.1
Unique Name	prot_E-fasciculatus_F_contig15.3541.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	210

Homology

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BLAST of mRNA_E-fasciculatus_F_contig15.3541.1 vs. uniprot
Match: D8LTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK8_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 4.120e-36
Identity = 104/221 (47.06%), Postives = 130/221 (58.82%), Query Frame = 0

Query:    1 MVESGLGTYYDDACVEDFDGYSGILGCNTGEVLQCRTCYLSTDLYMNATDTTAASLPSFTMCPCCIPTTLAE-HVDIQVRNF-FADYNISASDCTDSLTVTPVEAPATPLXXXXXXXXXXXXTPVPGESGDGA--LTTPEXXXXXXXXXXXXX------------PSDGAEPGSDTGNVDASETDVGLSMGAKVGIGAAAAVGVIFLGVVGYGTIKACRRG 205
            MVE G  TYYD  C       +G  GC T  + +CRTCYLST++YM+ T+ T AS P + MCPCC+P TL   H D++VR F ++ + ISASDCT + T TP+ +   P                     DGA  +TTP XXXXXXXXXXXXX            P+   + G D G  DAS+ + GLSMGAK+GIG AAA GVIFLG+VG+  IKA R+G
Sbjct:  127 MVEWGTSTYYDGTCE------AGTQGCYTDGIRECRTCYLSTEIYMDETNATEASRPPWAMCPCCVPATLESGHDDVEVRAFNYSVFTISASDCTITPTFTPLVSTEAPAAV------------------DGAQPVTTPTXXXXXXXXXXXXXXXXXXXXXVPSIPTPAPDGGVDEGGADASDKNDGLSMGAKIGIGVAAAAGVIFLGIVGFAAIKASRKG 323

[Close]

BLAST of mRNA_E-fasciculatus_F_contig15.3541.1 vs. uniprot
Match: A0A6H5KCT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT7_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 7.220e-33
Identity = 107/233 (45.92%), Postives = 127/233 (54.51%), Query Frame = 0

Query:    1 MVESGLGTYYDDACVEDFDGYSGILGCNTGEVLQCRTCYLSTDLYMNATDTTAASLPSFTMCPCCIPTTL-AEHVDIQVRNF-FADYNISASDCTDSLTVTPVEAPATPLXXXXXXXXXXXX--------------------------TPVPGESGDGAL-TTPEXXXXXXXXXXXXXPSDGAEPGSDTGNVDASETDVGLSMGAKVGIGAAAAVGVIFLGVVGYGTIKACRR 204
            MVESG  TYYDD C       +GI GC T  V +CRTCYLST++YM+AT+ T AS P + MCPCC+P TL ++H DI+V+ F ++ + ISASDCT + TV          XXXXXXXXXXXX                          TPVP  +G   + +TP               SDGA                GLSMGAKVGIGAAAAVGVIFLGVVG+  IKA  R
Sbjct:    1 MVESGTSTYYDDTCE------AGIQGCYTDGVRECRTCYLSTEIYMDATNATEASRPPWAMCPCCVPATLQSDHDDIEVKAFNYSVFGISASDCTITPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSGSRAMDTPVPSVAGSTYIPSTP--------IPTPGASSDGAXXXXXXXXXXXXXXXXGLSMGAKVGIGAAAAVGVIFLGVVGFRAIKASSR 219

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig15.3541.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig15.3541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LTK8_ECTSI	4.120e-36	47.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KCT7_9PHAE	7.220e-33	45.92	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 178..199
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 200..209
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..177
None	No IPR available	TMHMM	TMhelix		coord: 180..199

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig15	contig	E-fasciculatus_F_contig15:55722..60187 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig15.3541.1	mRNA_E-fasciculatus_F_contig15.3541.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig15 53511..60433 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig15.3541.1 ID=prot_E-fasciculatus_F_contig15.3541.1|Name=mRNA_E-fasciculatus_F_contig15.3541.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=210bp
MVESGLGTYYDDACVEDFDGYSGILGCNTGEVLQCRTCYLSTDLYMNATD
TTAASLPSFTMCPCCIPTTLAEHVDIQVRNFFADYNISASDCTDSLTVTP
VEAPATPLPTPSPTPPPVDPTPVPGESGDGALTTPEPVAEPTPGPTTESP
SDGAEPGSDTGNVDASETDVGLSMGAKVGIGAAAAVGVIFLGVVGYGTIK
ACRRGRGVK*