prot_E-fasciculatus_F_contig14924.3502.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14924.3502.1
Unique Nameprot_E-fasciculatus_F_contig14924.3502.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length128
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14924.3502.1 vs. uniprot
Match: D8LN42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN42_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 3.160e-23
Identity = 56/68 (82.35%), Postives = 58/68 (85.29%), Query Frame = 0 
Query:   61 REQQQRSEVGAGRALFGGFVPRRHAPAASLYDFGGKGGGAGSELGGGEXXXXXXGFAGVSSLPSIYSQ 128
            R + QRSEVGAGRALFGGFVPRRHAPAASLYDFGGKG GAGSE GGGE      GFAGVSSLPSIY+Q
Sbjct:  283 RLEHQRSEVGAGRALFGGFVPRRHAPAASLYDFGGKGQGAGSEQGGGETGRDG-GFAGVSSLPSIYNQ 349
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14924.3502.1 vs. uniprot
Match: A0A6H5JSW4_9PHAE (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW4_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.090e-21
Identity = 54/64 (84.38%), Postives = 56/64 (87.50%), Query Frame = 0 
Query:   65 QRSEVGAGRALFGGFVPRRHAPAASLYDFGGKGGGAGSELGGGEXXXXXXGFAGVSSLPSIYSQ 128
            +RSEVGAGRALFGGFVPRRHAPAASLYDFGGKG GAGSE GGGE      GFAGVSSLPSIY+Q
Sbjct: 1196 RRSEVGAGRALFGGFVPRRHAPAASLYDFGGKGQGAGSEQGGGETGGDG-GFAGVSSLPSIYNQ 1258
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14924.3502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN42_ECTSI3.160e-2382.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSW4_9PHAE1.090e-2184.38DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14924contigE-fasciculatus_F_contig14924:441..824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14924.3502.1mRNA_E-fasciculatus_F_contig14924.3502.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14924 441..825 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14924.3502.1 ID=prot_E-fasciculatus_F_contig14924.3502.1|Name=mRNA_E-fasciculatus_F_contig14924.3502.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=128bp
PGGGPAGEASTTSTGATEPSPPASTAAAAEVAARRKEKKERNKRKSSNSG
GSTASSACPNREQQQRSEVGAGRALFGGFVPRRHAPAASLYDFGGKGGGA
GSELGGGETGGDGGGFAGVSSLPSIYSQ
back to top