prot_E-fasciculatus_F_contig1492.3499.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1492.3499.1
Unique Nameprot_E-fasciculatus_F_contig1492.3499.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length139
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1492.3499.1 vs. uniprot
Match: D7G4A6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4A6_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 5.680e-73
Identity = 118/138 (85.51%), Postives = 124/138 (89.86%), Query Frame = 0 
Query:    1 MGGSGGQHTGVTAAVVCGLFAVVAATAVARKWKSGGAKRRMMGNIASGREFIDTLSAEVAELEAAIALAAEASDLDTARKEHERKSREHDECVTQVLTHLDKCTGGGDIGVARKKQIHRAEALGLRISKILPGAPVDG 138
            M GS GQ+TGV AAVVCGL AV   TAVARKWKSGG KRRM+GNIASGREF+D LSAEVA+LEA IALAAEASDLDTARKE+ERKSREHDE VTQVLTHLDKCTGG +IGVARKKQIHRAE LGLRISKILPG PVDG
Sbjct:    1 MSGSLGQYTGVIAAVVCGLVAVAGTTAVARKWKSGGTKRRMLGNIASGREFLDALSAEVADLEATIALAAEASDLDTARKENERKSREHDEHVTQVLTHLDKCTGGDEIGVARKKQIHRAEVLGLRISKILPGGPVDG 138
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BLAST of mRNA_E-fasciculatus_F_contig1492.3499.1 vs. uniprot
Match: A0A6H5JHT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT5_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 1.630e-72
Identity = 119/138 (86.23%), Postives = 124/138 (89.86%), Query Frame = 0 
Query:    1 MGGSGGQHTGVTAAVVCGLFAVVAATAVARKWKSGGAKRRMMGNIASGREFIDTLSAEVAELEAAIALAAEASDLDTARKEHERKSREHDECVTQVLTHLDKCTGGGDIGVARKKQIHRAEALGLRISKILPGAPVDG 138
            M GS GQHTGV AAVV  L AV A TAVARKWKSGG+KRRM+GNIASGREFIDTLSAEVA+LEA IALAAEASDLDTAR+EHERKSREHDE VTQVLTHLDKCTGGG+I VARKKQIHRAEALGLRIS ILPG  VDG
Sbjct:    1 MSGSLGQHTGVIAAVVFALVAVAATTAVARKWKSGGSKRRMLGNIASGREFIDTLSAEVADLEATIALAAEASDLDTARQEHERKSREHDESVTQVLTHLDKCTGGGEISVARKKQIHRAEALGLRISNILPGGHVDG 138
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1492.3499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4A6_ECTSI5.680e-7385.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHT5_9PHAE1.630e-7286.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
IPR036533BAG domain superfamilyGENE3D1.20.58.120coord: 40..129
e-value: 8.0E-6
score: 27.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1492contigE-fasciculatus_F_contig1492:9328..11645 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1492.3499.1mRNA_E-fasciculatus_F_contig1492.3499.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1492 9328..12626 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1492.3499.1 ID=prot_E-fasciculatus_F_contig1492.3499.1|Name=mRNA_E-fasciculatus_F_contig1492.3499.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=139bp
MGGSGGQHTGVTAAVVCGLFAVVAATAVARKWKSGGAKRRMMGNIASGRE
FIDTLSAEVAELEAAIALAAEASDLDTARKEHERKSREHDECVTQVLTHL
DKCTGGGDIGVARKKQIHRAEALGLRISKILPGAPVDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036533BAG_dom_sf