mRNA_E-fasciculatus_F_contig14908.3492.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14908.3492.1 vs. uniprot
Match: A0A6H5KEJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEJ8_9PHAE) HSP 1 Score: 155 bits (393), Expect = 4.210e-44 Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = 1
Query: 22 IHLGSPCILPTTAPVSFLDLRDLTELLQDGGHADLVSLETWSRDAGAYYCNEMFYRTLHAIRELGTPSVDGSSLIPAS 255
IH GSPCILPTTAPVSFLDL DL ELLQDGGHADLV+LETWSRDAGAYYCNEMFYRTLHAIRELGTPSVDGSSLIPAS
Sbjct: 177 IHEGSPCILPTTAPVSFLDLGDLAELLQDGGHADLVTLETWSRDAGAYYCNEMFYRTLHAIRELGTPSVDGSSLIPAS 254
BLAST of mRNA_E-fasciculatus_F_contig14908.3492.1 vs. uniprot
Match: A0A7S3EUW8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EUW8_9EUKA) HSP 1 Score: 71.6 bits (174), Expect = 3.910e-13 Identity = 48/119 (40.34%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 31 GSPCILPTTAPVSFLDLRDLTELLQDGG----------HADLVSLETWSRDAGAYYCNEMFYRTLHAIRELGT-PSVDGSSLIP--ASFFSAMFVHLPDVAVMGLDDMAVMVSFVAQRI 348
G+ C+L TTAP+ ++L L L+DGG A + LE WSRDAG YYCNE+++RTL+ IR G P SL AS A+FVHLP V + A + V ++I
Sbjct: 40 GAACLLGTTAPLDRINLP-LPAHLRDGGLAIQTLSLQQEAPRLPLELWSRDAGTYYCNEVYFRTLNVIRRAGLRPHYHPLSLASHGASLLPALFVHLPAAEVSTDEQSAEFIWQVIEKI 157
BLAST of mRNA_E-fasciculatus_F_contig14908.3492.1 vs. uniprot
Match: A0A7S4VFG5_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VFG5_9DINO) HSP 1 Score: 72.4 bits (176), Expect = 2.190e-12 Identity = 43/112 (38.39%), Postives = 60/112 (53.57%), Query Frame = 1
Query: 22 IHLGSPCILPTTAPVSFLDLRDLTELLQDGGHADLVSLETWSRDAGAYYCNEMFYRTLHAIRELGTPSVDGSS-LIPASFFSAMFVHLPDVAVMGLDDMAVMVSFVAQRIML 354
+ + PC+L +TAP++ L+L L E WSRDAGAYYCNE++YRTL A+R P G L+P +FVHLP V +++ A V VA R+ +
Sbjct: 237 LDVRGPCLLASTAPLNGLELPLLRRFPSPR--------EIWSRDAGAYYCNEVYYRTLQAVRTRLIPPASGQQDLLPV-----IFVHLPKPEVSSIEESAKFVQDVADRLSI 335
BLAST of mRNA_E-fasciculatus_F_contig14908.3492.1 vs. uniprot
Match: A0A7S2W0K8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0K8_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 5.920e-11 Identity = 41/95 (43.16%), Postives = 56/95 (58.95%), Query Frame = 1
Query: 34 SPCILPTTAPVSFLDLRDLTELLQDGGHADLVSLETWSRDAGAYYCNEMFYRTLHAIRELGTPSVDGSSLIPASFFSAMFVHLPDVAV-MGLDDM 315
+P +LPTT + ++ LR L + H V+ E WSRDAGAYYCNE++YR+L +R S D S +IP +F+HLP +GLDDM
Sbjct: 18 APHLLPTTVRLDYVTLRRLQQETASE-HLRRVT-ELWSRDAGAYYCNELYYRSLETVRR----SRDSSWVIPV-----LFIHLPTPDPDLGLDDM 101
BLAST of mRNA_E-fasciculatus_F_contig14908.3492.1 vs. uniprot
Match: A0A7S4BFQ2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BFQ2_CHRCT) HSP 1 Score: 65.5 bits (158), Expect = 7.940e-10 Identity = 36/85 (42.35%), Postives = 48/85 (56.47%), Query Frame = 1
Query: 31 GSPCILPTTAPVSFLDLRDLTELLQDGGHADLVSLETWSRDAGAYYCNEMFYRTLHAIRELGTPSVDGSSLIPASFFSAMFVHLP 285
G+ C++PTTAP + LT L H L E WSRDAG+YYCNE+++RTLHA+R + G A +FVH+P
Sbjct: 351 GAACLVPTTAP-----MHKLTLPLLRRPHR-LEQEEIWSRDAGSYYCNEVYFRTLHAVRSKQIGAATGR----AGLLPVVFVHMP 425
BLAST of mRNA_E-fasciculatus_F_contig14908.3492.1 vs. uniprot
Match: A0A7S2VZR4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2VZR4_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 8.060e-10 Identity = 41/95 (43.16%), Postives = 56/95 (58.95%), Query Frame = 1
Query: 34 SPCILPTTAPVSFLDLRDLTELLQDGGHADLVSLETWSRDAGAYYCNEMFYRTLHAIRELGTPSVDGSSLIPASFFSAMFVHLPDVAV-MGLDDM 315
+P +LPTT + ++ LR L + H V+ E WSRDAGAYYCNE++YR+L +R S D S +IP +F+HLP +GLDDM
Sbjct: 208 APHLLPTTVRLDYVTLRRLQQETASE-HLRRVT-ELWSRDAGAYYCNELYYRSLETVRR----SRDSSWVIPV-----LFIHLPTPDPDLGLDDM 291
BLAST of mRNA_E-fasciculatus_F_contig14908.3492.1 vs. uniprot
Match: A0A7S3JRC4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRC4_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.570e-8 Identity = 44/125 (35.20%), Postives = 58/125 (46.40%), Query Frame = 1
Query: 4 TRWDGIIHLGSPCILPTTAPVSFLDLRDLTELLQDGGHADLVSLETWSRDAGAYYCNEMFYRTLHAIR--ELGTPS------------VDGSSLIPAS---------FFSAMFVHLPDVAVMGLD 309
T+ I G PC+ TTAP+ L L E + E WSRDAGA+YCNE+++R+LH +R +L PS +D SL AS +FVHLPD +M D
Sbjct: 180 TKESAAIENG-PCLQVTTAPLDRLILPSTNE-----------TNEVWSRDAGAFYCNELYFRSLHTVRSRQLLVPSPSSSCLLLSQQLLDNDSLTRASDHHLHFAQALIPVLFVHLPDTNIMDND 292
BLAST of mRNA_E-fasciculatus_F_contig14908.3492.1 vs. uniprot
Match: A0A7S2Z4Q2_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z4Q2_9CHLO) HSP 1 Score: 58.2 bits (139), Expect = 9.860e-8 Identity = 47/156 (30.13%), Postives = 61/156 (39.10%), Query Frame = 1
Query: 1 PTRWDGIIHLG----------------------------SPCILPTTAPVSFLDLRDLTELLQDGGHADLVSLETWSRDAGAYYCNEMFYRTLHAIRELGTPSVDGSSLI----------PASFFSAMFVHLP-DVAVMGLDDMAVMVSFVAQRIM 351
P+ W ++H+G +P ILPTT DL +L D A + E WSRDAG YYCNE+FYR+LHA+R P +FVHLP D + MA MV+ + IM
Sbjct: 39 PSNWRAVVHMGLEDRAKGLKIEVAALNNRASDNTTVYPTAPPILPTTV--------DLGKLALDPTQA---TGEIWSRDAGHYYCNEIFYRSLHAVRRAAAXXXXXXXXXXXXXXXXXXXPRQLLPVVFVHLPEDTGGNTIAHMADMVTTIIATIM 183
BLAST of mRNA_E-fasciculatus_F_contig14908.3492.1 vs. uniprot
Match: A0A5B8MWB4_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MWB4_9CHLO) HSP 1 Score: 57.4 bits (137), Expect = 3.030e-7 Identity = 41/123 (33.33%), Postives = 52/123 (42.28%), Query Frame = 1
Query: 1 PTRWDGIIHLG----------------------------SPCILPTTAPVSFLDLRDLTELLQDGGHADLVSLETWSRDAGAYYCNEMFYRTLHAIRELGTPSVDGSSLIPASFFSAMFVHLP 285
P W+ IIHLG ILPTT + LDL + DG + E WSRDAG +YCNE+FYRTL +R + + L+P +FVHLP
Sbjct: 98 PKAWEAIIHLGLESTTKGLKVEVAALNNKAKDNSTIIDGGSTILPTTVDLGALDLAPALSGV-DGSSPE----EMWSRDAGHFYCNEIFYRTLRVVRRM---YMKDGRLMPV-----VFVHLP 207
BLAST of mRNA_E-fasciculatus_F_contig14908.3492.1 vs. uniprot
Match: A0A812X286_SYMPI (Pcp protein (Fragment) n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812X286_SYMPI) HSP 1 Score: 54.3 bits (129), Expect = 9.660e-7 Identity = 35/99 (35.35%), Postives = 52/99 (52.53%), Query Frame = 1
Query: 16 GIIHLGSPCILPTTAPVSFLDLRDLTELLQDGGHADLVSLETWSRDAGAYYCNEMFYRTLHAIRELGTPSVDGSSLIPASFFSAMFVHLPDVAVMGLDD 312
G + +G P +LPTT + + L H E WSRDAG ++CNE++YRTL +IRE G+ LIP+ +F+H+P + M L +
Sbjct: 48 GRVVVGGPQLLPTTGDLGAVALNT------QNPH------ELWSRDAGDFFCNEIYYRTLFSIREHRRLRCPGA-LIPS-----IFIHVPPLHKMPLQE 128 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14908.3492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14908.3492.1 >prot_E-fasciculatus_F_contig14908.3492.1 ID=prot_E-fasciculatus_F_contig14908.3492.1|Name=mRNA_E-fasciculatus_F_contig14908.3492.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=132bp PTRWDGIIHLGSPCILPTTAPVSFLDLRDLTELLQDGGHADLVSLETWSRback to top mRNA from alignment at E-fasciculatus_F_contig14908:1291..3182- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14908.3492.1 ID=mRNA_E-fasciculatus_F_contig14908.3492.1|Name=mRNA_E-fasciculatus_F_contig14908.3492.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1892bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14908:1291..3182- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14908:1291..3182- >mRNA_E-fasciculatus_F_contig14908.3492.1 ID=mRNA_E-fasciculatus_F_contig14908.3492.1|Name=mRNA_E-fasciculatus_F_contig14908.3492.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=792bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14908:1291..3182- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |