mRNA_E-fasciculatus_F_contig1490.3489.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1490.3489.1 vs. uniprot
Match: A0A6H5KMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF0_9PHAE) HSP 1 Score: 547 bits (1409), Expect = 1.140e-175 Identity = 404/500 (80.80%), Postives = 418/500 (83.60%), Query Frame = 1
Query: 736 MLSVGPLGDDSEALRLEAMAGRGASGXXXXXXXXXXXNSARSIHAIRCFNAQTDLSALDLLRNGRLGDDXXXXXXXXGKALATATGGDALGGRKGLLDLDSVPVLPFLLSGGLAHDNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGERVFDLCLTRRERSTEVSQTVEAFRLNRDQARLLWRCATWFRPAEAAGDNXXXXXXXXXXRYDGAGTRGRXXXXXXXXXXXXXXXXXXXXXXXXXDGASVVLVHGVFGAGKSLTLVALCVMIDRIATADARLRPSRGLPPRPKAEQVRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAKQAVQSELEAMLKTAVGADRKEIGRALKASKAESFTADQARRLREARVTGVTCASATVPLLTRPPRSPRPLPRGGVASGGSGNNGSAATRKTGVAAGAAKTAGPWKRPAGVAGGNGRLLWGGXXXX----W----GPGRRRG 2211
MLSVGPLGDDSEALRLEA A GA XXXXXXXXXX +RSIHAIRCFNAQTDLSALDLLRNGRLGDDXXXXXXXX +ALG KGLLDLDSVPVL FLLSGGLA D+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SG+RVFDLCLTR ER+ EVSQTVEAFRLNRDQARLLWRCATWFRPAEAAGDNXXXXXXXXXX XXXXXXXXXXX DGA VVLVHGVFGAGKSLTLVALCVM+DRIA ADARLR SRGLPPRPKAEQVRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDA++AVQSEL+AMLKTAVGA+R EIGRAL+ASKAESFT DQA+RLREARVTGVTCASATVPLLTRPPRSPRPLPRGGV SGG+G+N S A RKTGVA G AKTAGPWKRPAGVAG NGR L GG X W G GRRRG
Sbjct: 1 MLSVGPLGDDSEALRLEATARGGAX--XXXXXXXXXXXXSRSIHAIRCFNAQTDLSALDLLRNGRLGDDXXXXXXXXXXXXXXXXX-NALGRGKGLLDLDSVPVLRFLLSGGLAPDDCNSSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SGDRVFDLCLTRGERNAEVSQTVEAFRLNRDQARLLWRCATWFRPAEAAGDNXXXXXXXXXXXXX---XXXXXXXXXXXXXXXGRPTEEGGGGMAGEDGAPVVLVHGVFGAGKSLTLVALCVMVDRIAAADARLRSSRGLPPRPKAEQVRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVGAERDEIGRALQASKAESFTTDQAKRLREARVTGVTCASATVPLLTRPPRSPRPLPRGGVVSGGNGSN-SVAARKTGVATGGAKTAGPWKRPAGVAGSNGRRLGGGRGSXXERGWSGGGGEGRRRG 491
BLAST of mRNA_E-fasciculatus_F_contig1490.3489.1 vs. uniprot
Match: D8LH01_ECTSI (Prematurely terminated mRNA decay factor-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH01_ECTSI) HSP 1 Score: 456 bits (1173), Expect = 4.800e-143 Identity = 364/676 (53.85%), Postives = 392/676 (57.99%), Query Frame = 2
Query: 1277 SGSTETRPVFSGAVRPGSAPLRLPVTMTMTRKATTASDTMVQELEGGTRRRRGGTKSRGVRRXXEEGGRQEGTVPRLFSYTACS------------------------------------------ALESLLLWWLCA**S----IG*LPRTHA*--GRHV-ASPPGRRRNKSGFFSLPEPTSPSTEF*WDWCRRVLTTSPASAHIAGRTSPSWTGSCTAAPPGATRNRRCRVSSRPCSRRLLERTGKR*GEH*RRRRRKASRQTKPGGCARPA*PASPALRRQYPCSHDRPGRRALSHAAALPAAVAATTGPLRPERLGSQREPQRRLVHGNARRGLLGATGVFYGGG----GXXXXXXXXXXGGHRGYDIVVLDECSQIVEPMSLLPIAVAQPRRLVLVGDPMQLPPPVTRARQXXXXXXXXXXXXXXXXXXXXXXXQPQRQMPKDAWLEKANARPGNADTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIRNAFEAKAVADVVVSLLRAGSSGGGGGVSAANIGVICLYKAQLAQVRRELESASCATPGASSMPSSXXXXXXLGIGVQPEGDGGPPGQQGGGASSVSSCCRDVQVSTVDAFQGAEKDIVIVASTRTERLGFIV 3145
+GSTETRPVFSGAVRPGSAPLR PVTM T VQELE T VRR EEGG QE T PRLFS TACS A++ +L+ + A +G RTH R V +SPPGR K+ L + D R L S A + +T R R RV+ C+ + T+P P SP R P G + + A AT G + G + P G+ G+ G GGG G XXXXXGG RGYDIVVLDE SQIVEPMSLLP+AVAQPRRLVLVGDPMQLPPPV RAR XXXXXXXXXXXXXXXXXX QRQMPKDAWLEKANARPGN DTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLV GLAPLTLLDAAGRGAESTAPGGSI+NAFEA+AVADVV SLLRAGS KAQLAQVRRELESASCATPGA+S+PSS GVQP G+G GQQGG ASSVSSCCRDVQVSTVDAFQGAEKDIVIVASTRTERLGFIV
Sbjct: 83 TGSTETRPVFSGAVRPGSAPLRAPVTMATTEXX--XXXXXVQELERETXXXXXXXXXXAVRRRREEGGWQERTAPRLFSCTACSVALCVMVDRIATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVGADRDEIGRALQASKAESFTTDQTK---------------RLREARVTGVTCASATVPLL------------------TRP--------PRSP---RPLPRGGVVSGGNGSNGSVAARKTGVATGGT---KTAGPWKRPA----------GVAGSNGRLLGGGRGSAGARGWSXXXXXGGRRGYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXS-QRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVSGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVASLLRAGSX-----XXXXXXXXXXXDKAQLAQVRRELESASCATPGAASIPSSSSSPDD---GVQPGGEGRDEGQQGG-ASSVSSCCRDVQVSTVDAFQGAEKDIVIVASTRTERLGFIV 689
BLAST of mRNA_E-fasciculatus_F_contig1490.3489.1 vs. uniprot
Match: D8LH00_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH00_ECTSI) HSP 1 Score: 181 bits (458), Expect = 2.840e-49 Identity = 98/129 (75.97%), Postives = 100/129 (77.52%), Query Frame = 3
Query: 99 MGSERLRG*GGLPPCLLSRHAGGDATDARRSRGDALRESQDKPRNHREFRVRFR--------QGRGAGWSNGPTGPPLAAEAVPPRRHPVLLQRLFVSGWRWRRRRQSEQEQWVGQPVGREASTAMARA 461
MG+ERLRG GGLPPCL SRHAGGDATDARR R DALRESQ KPRNHREFR QGRGA SNGPTGP LAAEAVPPRRHPVLLQRLFVSGWR QEQW+GQPVGREASTAMA A
Sbjct: 1 MGTERLRGRGGLPPCLFSRHAGGDATDARRGRSDALRESQGKPRNHREFRXXXXXXXXXXXXQGRGASRSNGPTGPSLAAEAVPPRRHPVLLQRLFVSGWRRXXXXXXXQEQWMGQPVGREASTAMAGA 129
BLAST of mRNA_E-fasciculatus_F_contig1490.3489.1 vs. uniprot
Match: A0A7L3DCX7_PLUSO (ZGRF1 protein (Fragment) n=2 Tax=Charadriiformes TaxID=8906 RepID=A0A7L3DCX7_PLUSO) HSP 1 Score: 181 bits (460), Expect = 2.560e-43 Identity = 124/342 (36.26%), Postives = 166/342 (48.54%), Query Frame = 2
Query: 2225 YDIVVLDECSQIVEPMSLLPIAVAQPRRLVLVGDPMQLPPPVTRARQXXXXXXXXXXXXXXXXXXXXXXXQPQRQMPKDAWLEKANARPGNADTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIRNAFEAKAVADVVVSLLRAGSSGGGGGVSAANIGVICLYKAQLAQVRRELESASCATPGASSMPSSXXXXXXLGIGVQPEGDGGPPGQQGGGASSVSSCCRDVQVSTVDAFQGAEKDIVIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVV 3250
+ +V+LDECSQ+ EP SLLPIA Q +LVLVGDP QLPP V + + LE+TLF RL +G KP+LL QYRCHP +SA+A+ LFY+G+L DGVA RDR PL+ L L G E T S N EA ++ +L+ +G G + +GV+ LYK+Q+ ++R L GG S + R VQVSTVDAFQGAEK+I++++ RT + GFI + +R+ VALTRA+ HLL+VG + L N LW V+
Sbjct: 535 FPVVMLDECSQMTEPASLLPIARFQCEKLVLVGDPKQLPPTVQ------------------------------------------GSESAHGQGLERTLFDRLCLMGHKPILLRTQYRCHPAISAIANELFYEGQLVDGVAERDRSPLLDWLPTLCFYSV--NGVEQTEGDNSFYNPAEAHFTVQLIQALIASGIEG-------SAVGVVTLYKSQMCKIRNLL----------------------------------------GGVRSAALETRAVQVSTVDAFQGAEKEIIVLSCVRTRQTGFIDAERRMNVALTRAKRHLLIVGNLACLSKNRLWGRVI 785
BLAST of mRNA_E-fasciculatus_F_contig1490.3489.1 vs. uniprot
Match: UPI001EB09917 (protein ZGRF1-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB09917) HSP 1 Score: 179 bits (453), Expect = 3.760e-43 Identity = 130/342 (38.01%), Postives = 165/342 (48.25%), Query Frame = 2
Query: 2225 YDIVVLDECSQIVEPMSLLPIAVAQPRRLVLVGDPMQLPPPVTRARQXXXXXXXXXXXXXXXXXXXXXXXQPQRQMPKDAWLEKANARPGNADTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIRNAFEAKAVADVVVSLLRAGSSGGGGGVSAANIGVICLYKAQLAQVRRELESASCATPGASSMPSSXXXXXXLGIGVQPEGDGGPPGQQGGGASSVSSCCRDVQVSTVDAFQGAEKDIVIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVV 3250
+ VVLDECSQ+ EP SLLPIA +LVLVGDP QL P + + ++D LE+TLF RL KL P+LL QYRCHP++S +A+ LFY G+L DGV R PL P L+ D AG G E T GS N EA+ V ++ +L+ G V A NIGVI LYKAQ+ ++ L + + A V+ + VQVSTVDAFQG EKDI+I++ RT +GFI S +R VALTRARHHLL+VG + L N LW V+
Sbjct: 249 FPFVVLDECSQMTEPSSLLPIARFSCEKLVLVGDPKQLDPTIQ------------------------------------------GSEAAHSDGLEQTLFDRLMKLDYCPVLLRTQYRCHPRISGIANTLFYSGQLCDGVTEDSRQPLSPVFPTLSFYDEAG-GQEVTDGSGSYYNESEARLVVLLIHALVIEG-------VEAGNIGVITLYKAQMYKIITSLHTDNPA---------------------------------------VNKQLKCVQVSTVDAFQGGEKDIIILSCVRTNNIGFIDSDKRANVALTRARHHLLIVGHQKNLSRNKLWSRVI 501
BLAST of mRNA_E-fasciculatus_F_contig1490.3489.1 vs. uniprot
Match: A0A1D2ADD1_AUXPR (Uncharacterized protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2ADD1_AUXPR) HSP 1 Score: 172 bits (436), Expect = 4.310e-43 Identity = 127/338 (37.57%), Postives = 167/338 (49.41%), Query Frame = 2
Query: 2225 YDIVVLDECSQIVEPMSLLPIAVAQPRRLVLVGDPMQLPPPVTRARQXXXXXXXXXXXXXXXXXXXXXXXQPQRQMPKDAWLEKANARPGNADTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGG--SIRNAFEAKAVADVVVSLLRAGSSGGGGGVSAANIGVICLYKAQLAQVRRELESASCATPGASSMPSSXXXXXXLGIGVQP----EGDGGPPGQQGGGASSVSSCCRDVQVSTVDAFQGAEKDIVIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVL 3220
+ + +LDECSQ+VEP+SL PI AQ R L+ VGDP+QLPP V +A ARP L + +FVRLA G LL RQYRCHP +S + +R FY G+L DG +A RGP++PGL P +D RG ES G S+ N EA + +V LL G GV + IG+IC ++AQ+A ++ L P + G+ P E GP +Q G VQV+TVDAFQG E+D++I+++ T F+ PQRLCVALTRAR HL +VG S L
Sbjct: 69 FAVTILDECSQLVEPLSLSPIIRAQSRYLIAVGDPLQLPPIVATPTAVAPAGGEAGPAL------------------------QAGARPTARHGLARPMFVRLAAAGHPVHLLRRQYRCHPVISQIPNRCFYGGQLLDGCSASQRGPVLPGLPPRLWIDP--RGGESGGERGARSVTNRREADVICSMVQQLL-------GHGVPPSAIGIICFFRAQVALLQGLLNPQP---------PMNVTPEAGQGVAHGPCTVSEAPQGPLAEQAG-----------VQVATVDAFQGGERDVIILSTCVTRPSHFVGDPQRLCVALTRARCHLFLVGSPSAL 353
BLAST of mRNA_E-fasciculatus_F_contig1490.3489.1 vs. uniprot
Match: A0A091I602_BUCRH (Uncharacterized protein C4orf21 (Fragment) n=1 Tax=Buceros rhinoceros silvestris TaxID=175836 RepID=A0A091I602_BUCRH) HSP 1 Score: 173 bits (439), Expect = 5.960e-43 Identity = 123/342 (35.96%), Postives = 165/342 (48.25%), Query Frame = 2
Query: 2225 YDIVVLDECSQIVEPMSLLPIAVAQPRRLVLVGDPMQLPPPVTRARQXXXXXXXXXXXXXXXXXXXXXXXQPQRQMPKDAWLEKANARPGNADTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIRNAFEAKAVADVVVSLLRAGSSGGGGGVSAANIGVICLYKAQLAQVRRELESASCATPGASSMPSSXXXXXXLGIGVQPEGDGGPPGQQGGGASSVSSCCRDVQVSTVDAFQGAEKDIVIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVV 3250
+ +V+LDECSQ+ EP SLLPIA Q +LVLVGDP QLPP + + G+ LE+TLF RL +G P+LL QYRCHP +SA+A+ LFY+G L DGV+ +R PL+ L L G E T S N E ++ +LL +G G + IGVI LYK+Q+++++ L S S S + R VQVSTVDAFQGAEK++V+++ RT ++GFI S +R+ VALTRA+ HLLVVG + L N LW V+
Sbjct: 152 FPVVMLDECSQMTEPASLLPIARFQCEKLVLVGDPKQLPPTIQ------------------------------------------GSESGHEKGLEQTLFDRLCLMGHDPVLLRTQYRCHPAISAVANELFYEGHLIDGVSEEERRPLLDWLPTLCFYSVTG--VEQTERDNSFYNLAEVHFTVKLLQALLASGVDG-------SAIGVITLYKSQMSKIQNSLSSVS----------------------------------------SEAFNVRAVQVSTVDAFQGAEKEVVVLSCVRTRQMGFIDSEKRMNVALTRAKRHLLVVGSLACLSRNRLWGRVI 402
BLAST of mRNA_E-fasciculatus_F_contig1490.3489.1 vs. uniprot
Match: A0A2K3E7V6_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3E7V6_CHLRE) HSP 1 Score: 182 bits (463), Expect = 7.250e-43 Identity = 139/343 (40.52%), Postives = 182/343 (53.06%), Query Frame = 2
Query: 2222 GYDIVVLDECSQIVEPMSLLPIAVAQPRRLVLVGDPMQLPPPVTRARQXXXXXXXXXXXXXXXXXXXXXXXQPQRQMPKDAWLE------------KANARPGNA-DTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIRNAFEAKAVADVVVSLLRAGSSGGGGGVSAANIGVICLYKAQLAQVRRELESASCATPGASSMPSSXXXXXXLGIGVQPEGD--GGPPGQQGGGASSVSSCCRDVQVSTVDAFQGAEKDIVIVASTRTERLGFIVSPQRLCVALTRARHHLLVVG 3205
G+ +VVLDECSQ+ EP+ L+P+ A+ R LV GDP QLPP + PQ Q + L+ PG A D+L + LFVRL +LG P LL QYRCHP++S++A+ FY+GRL DGV DR PL+ GL PL +++ G+ A S N EA+ V+ +V +LL G VSA +GVIC Y+AQ+ +RR L+ A A G+S P XXXXX D G G+ GGG S VQV+TVD+FQGAEK++VI+A+T + F +RL VALTR R HLLVVG
Sbjct: 1428 GFTVVVLDECSQMTEPLCLVPLLRAKARFLVAAGDPQQLPPVIASPANLTAPA-------------------PQHQPGPASGLQWGPGAVGAAGAGSQRGHPGAATDSLLRPLFVRLCQLGHAPHLLSYQYRCHPRLSSIANAAFYEGRLRDGVTPADRPPLLVGLPPLVFVESGGQAAVDAYTRSSY-NTQEAQLVSRMVAALLAQG-------VSADEVGVICFYRAQVGAIRRALQQAD-AGGGSSRAPGEAXXXXXXXXXXXXXXDQQDGLVGEGGGGRDSGM-----VQVATVDSFQGAEKEVVILATTVSRAADFASDAKRLNVALTRGRRHLLVVG 1737
BLAST of mRNA_E-fasciculatus_F_contig1490.3489.1 vs. uniprot
Match: A0A1Y1II62_KLENI (RNA helicase nonsense mRNA reducing factor n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1II62_KLENI) HSP 1 Score: 182 bits (462), Expect = 7.250e-43 Identity = 124/342 (36.26%), Postives = 173/342 (50.58%), Query Frame = 2
Query: 2225 YDIVVLDECSQIVEPMSLLPIAVAQPRRLVLVGDPMQLPPPVTRARQXXXXXXXXXXXXXXXXXXXXXXXQPQRQMPKDAWLEKANARPGNADTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIRNAFEAKAVADVVVSLLRAGSSGGGGGVSAANIGVICLYKAQLAQVRRELESASCATPGASSMPSSXXXXXXLGIGVQPEGDGGPPGQQGGGASSVSSCCRDVQVSTVDAFQGAEKDIVIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVV 3250
Y + +LDECSQ+ EP+SL+P+A+ +LV VGDP QLPP +T + K+ +E + G+ LE+ +FVRLA++G P++L QYRCHP +SAL ++LFY GRL DG +A DR LV GL L LD E+ S N +EA A +V L+ G G IGVI Y+AQ +++ L L G QP+ ++ VQVSTVDAFQG EKDI+I++ RT +GF+ SP RL VA++RAR+HLL++G L T P+W+E++
Sbjct: 757 YKVCLLDECSQMPEPLSLMPLAILGCEKLVAVGDPAQLPPQLTGSSSAS----------------------------KEDDIEAGLQKSGSGHGLERAMFVRLAEIGHTPIMLRTQYRCHPLVSALPNKLFYAGRLLDGCSAADRAALVAGLPALLFLDTRQEAQEARDASSSYYNDYEANLAARMVNKLIDKGCRPG-------QIGVIVPYRAQASKLNSLLSE--------------------LQSGTQPK-----KRRRKAALEDEDQLSDFVQVSTVDAFQGMEKDIIILSCCRTNGIGFLASPHRLNVAMSRARNHLLIIGCAPNLQTCPMWKELL 1038
BLAST of mRNA_E-fasciculatus_F_contig1490.3489.1 vs. uniprot
Match: UPI00139048CE (protein ZGRF1 isoform X1 n=2 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00139048CE) HSP 1 Score: 170 bits (431), Expect = 1.880e-42 Identity = 120/342 (35.09%), Postives = 167/342 (48.83%), Query Frame = 2
Query: 2225 YDIVVLDECSQIVEPMSLLPIAVAQPRRLVLVGDPMQLPPPVTRARQXXXXXXXXXXXXXXXXXXXXXXXQPQRQMPKDAWLEKANARPGNADTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIRNAFEAKAVADVVVSLLRAGSSGGGGGVSAANIGVICLYKAQLAQVRRELESASCATPGASSMPSSXXXXXXLGIGVQPEGDGGPPGQQGGGASSVSSCCRDVQVSTVDAFQGAEKDIVIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVV 3250
+ I++LDECSQ+ EP SLLP+A + ++L+LVGDP QL P + + P + LE+TLF RL KLG P +L QYRCHP +SA+A++LFY +L DGV + +R P+V A L + + RG E GS N EAK V ++ LL AG V A IGVI LYK+QL + L ++ A+ S + VQ+STVDAFQG EKD+V+++ RT+R+GFI +R VALTRA+ HLL++G +L +N +W V+
Sbjct: 103 FPILLLDECSQMTEPSSLLPLARFECQKLLLVGDPKQLSPTIQ------------------------------------------GSEPEHDKGLEQTLFDRLIKLGYHPTMLRVQYRCHPVISAIANKLFYDSQLKDGVTSEERSPIVDFAATLCFYNVS-RGQEKHGQDGSYYNEEEAKFVVFMIDRLLEAG-------VEPAQIGVITLYKSQLRTITTHLAASKSAS---------------------------------------HSEMKGVQISTVDAFQGGEKDVVLLSCVRTKRVGFIDCDRRTNVALTRAKRHLLIIGSLRMLSSNAVWGNVI 355 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1490.3489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1490.3489.1 >prot_E-fasciculatus_F_contig1490.3489.1 ID=prot_E-fasciculatus_F_contig1490.3489.1|Name=mRNA_E-fasciculatus_F_contig1490.3489.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=772bp MQEEMQLTLDEAVVTRFERARTNLATIANSGSGSGRGGARGGQMDRRDPLback to top mRNA from alignment at E-fasciculatus_F_contig1490:5109..17787- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1490.3489.1 ID=mRNA_E-fasciculatus_F_contig1490.3489.1|Name=mRNA_E-fasciculatus_F_contig1490.3489.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=12679bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1490:5109..17787- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1490:5109..17787- >mRNA_E-fasciculatus_F_contig1490.3489.1 ID=mRNA_E-fasciculatus_F_contig1490.3489.1|Name=mRNA_E-fasciculatus_F_contig1490.3489.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4632bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1490:5109..17787- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |