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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1520 |
| Cds size | 873 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1489.3480.1 >prot_E-fasciculatus_F_contig1489.3480.1 ID=prot_E-fasciculatus_F_contig1489.3480.1|Name=mRNA_E-fasciculatus_F_contig1489.3480.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=291bp
MDVVERVKSVVKSEDVRDNMEHFTKSVDLYELARYETPSAVSERLGDGFS
TLALRSDMGATIDTILTDEDSCKYPLLVTDNVPRTMPSIHEHIGEGTHGH
VYSIVSRFGNMAVKFQNVFSPGNGSMDVPMNEFALEVAIQLHASSIGISP
NVYNAWISTYSTTWGDREQDVLVMDRLNETLFDKTFREKDYTHGVMQLIS
KMHENMVFHGDMHSGNIMIDGNNDPIMIDFGKSKSMPQDPEEKRWCMVHD
HVLLYNSISRKSELKSILREKISELAPDRTVLGTTFFMSE* back to topmRNA from alignment at E-fasciculatus_F_contig1489:14594..16781- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1489.3480.1 ID=mRNA_E-fasciculatus_F_contig1489.3480.1|Name=mRNA_E-fasciculatus_F_contig1489.3480.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2188bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1489:14594..16781- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTTGAATAGATATTGGAATCATTTCGAACAAAGGAGCCCTGGTGGCTCTC
TGACAGGCACGAAAGCAGTCCTAGAATACCTTCGCTCCGTGGTACTTGCA
TCTCGGTTCGACGAATCTGCCCGCCCTGTGGCGTGGAGTGAGAGACCTTG
CGTGCGTTGGGGGGGGAAGGCCCGCCGCCATCCAGGTGTACCATTGCTGC
TGGACTCTGGTTTTCTAGGCACGTCGTAGGTCACGCCGGCTGCATCCCTC
CCGGTCCAGGTGAGATCGGTTGATTCATTATCTGCTCGCTCTCACGCACC
CTTTGATCGAAGATGTGCTGTGTAGACTATGTACTGCTGTAGGTCAAGGT
CCGGTGTTGCACGTCGAGCAACAGTACCAGCCCCGCGCTGTTTCCGCCAC
TTTTTGACGCCGCAGCCCGAGTACTACACACGCGCCTGCAGGGTGGTGCC
TACATGGTAGACTCTTGAATACTGTACAATGTCCTGGTCCTTTCACACGT
GTTCCCTCTGATGCGTACATAGTCTACTGCTGTAGATGCGTTCAGGCGAC
CGGTGTTTACCACTCCCCCACGGTAAAGTCGAAAGACGGGCGGACATGAC
CCACCACACACATTTTCGATACTTTTGTAGTATAGAAACTATGAATAGAG
GTAGAGAGGGGCCAGGAGTTCGTCACAAGCACCTATTGTAGAGATCTTTG
CGTTCAAGACTCCTTGGACCAACAAAGACATTGAGATATGAGACGGTGTA
GCCATTTCGACCCTCGATTAGTCAGAATTCCGTTTTCTTCTCCCGCCCCT
GCTCCATTTCGGACTGGTGCTTTCATATTGGTTAGGTCGAACGAACTACA
AATTAGGCTTTTCAGCTAAACTGCAGACCACTATCATACTCTCCCAAATA
ATGCAGATTTTCCGACATGGACGTCGTGGAGAGAGTGAAGTCGGTGGTGA
AAAGTGAAGATGTCCGAGACAACATGGAACATTTCACTAAATCCGTCGAT
CTATACGAGCTTGCGCGTTATGAGACCCCGTCCGCGGTTTCTGAGAGACT
GGGAGATGGCTTTTCGACCCTGGCGTTGAGGAGCGATATGGGTGCCACCA
TTGATACGATACTGACAGATGAGGATTCGTGCAAATACCCGCTATTAGTC
ACCGACAACGTGCCCCGGACCATGCCGAGCATACACGAGCACATCGGAGA
AGGCACACACGGACACGTATATTCCATCGTGAGTCGTTTTGGGAACATGG
CCGTGAAATTCCAGAATCATTCATCTGGCGACGGGCGTGTGTTCTCGCCG
GGCAACGGGTCCATGGACGTTCCGATGAATGAATTCGCACTCGAGGTTGC
GATCCAGTTGCACGCGAGCTCGATAGGGATCTCGCCGAACGTGTACAACG
CATGGATCTCGACGTACTCCACGACGTGGGGAGACCGGGAACAAGACGTC
CTCGTCATGGATAGACTGAATGAAACACTCTTCGACAAGACCTTTCGGGA
GAAGGACTACACGCATGGGGTAATGCAGCTTATCTCCAAGATGCACGAGA
ACATGGTATTTCACGGAGACATGCACTCGGGAAACATCATGATTGACGGA
AACAATGACCCCATCATGATCGATTTTGGCAAGTCAAAGTCGATGCCACA
AGATCCCGAGGAGAAGAGGTGGTGCATGGTCCATGATCACGTTCTTCTAT
ACAATTCGATCTCGAGGAAATCCGAGCTCAAGTCTATTCTTAGGGAGAAG
ATCTCAGAGTTGGCACCCGACCGTACGGTCCTCGGGACAACGTTCTTCAT
GAGCGAGTAAGCGGTTCAACAGTAGAAATCAGGGTTGAGGACGAGGAACC
CCACCACGAGAATTAGAGCTAAAGAGTGGAGACCCTGTACAAAATGCTGG
GAATCCTTGTGCGAGTAGGACAACTCGGGAAAAGAACTCGATGAGCACGG
CCAACCAAGTCGGTGAGCTACATAGACGTGTTACGACCTCAATGTCTGCC
TCGCGGAGGATGTTTCGAGGTCGTGCTTGCCGATAGTGATGGACGAGACG
TGCTGTTTCCGAGATCCGTGTATGTGGAATGTTGGTGTAACAGTAAACAG
GCCCGTACACCGCTGCTCCTCGGACTTTTTGCGGACAACCAGGGCATGTG
AACGCTCGAGAGGTCTTCTTGGGTGTAGCGATTCGGTG back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1489:14594..16781- >mRNA_E-fasciculatus_F_contig1489.3480.1 ID=mRNA_E-fasciculatus_F_contig1489.3480.1|Name=mRNA_E-fasciculatus_F_contig1489.3480.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1746bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1489:14594..16781- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGACGTCGTGGAGAGAGTGAAGTCGGTGGTGAAAAGTGAAGATGTCCG
AGACAACATGGAACATTTCACTAAATCCGTCGATCTATACGAGCTTGCGC
GTTATGAGACCCCGTCCGCGGTTTCTGAGAGACTGGGAGATGGCTTTTCG
ACCCTGGCGTTGAGGAGCGATATGGGTGCCACCATTGATACGATACTGAC
AGATGAGGATTCGTGCAAATACCCGCTATTAGTCACCGACAACGTGCCCC
GGACCATGCCGAGCATACACGAGCACATCGGAGAAGGCACACACGGACAC
GTATATTCCATCGTGAGTCGTTTTGGGAACATGGCCGTGAAATTCCAGAA
TATGGACGTCGTGGAGAGAGTGAAGTCGGTGGTGAAAAGTGAAGATGTCC
GAGACAACATGGAACATTTCACTAAATCCGTCGATCTATACGAGCTTGCG
CGTTATGAGACCCCGTCCGCGGTTTCTGAGAGACTGGGAGATGGCTTTTC
GACCCTGGCGTTGAGGAGCGATATGGGTGCCACCATTGATACGATACTGA
CAGATGAGGATTCGTGCAAATACCCGCTATTAGTCACCGACAACGTGCCC
CGGACCATGCCGAGCATACACGAGCACATCGGAGAAGGCACACACGGACA
CGTATATTCCATCGTGAGTCGTTTTGGGAACATGGCCGTGAAATTCCAGA
ATGTGTTCTCGCCGGGCAACGGGTCCATGGACGTTCCGATGAATGAATTC
GCACTCGAGGTTGCGATCCAGTTGCACGCGAGCTCGATAGGGATCTCGCC
GAACGTGTACAACGCATGGATCTCGACGTACTCCACGACGTGGGGAGACC
GGGAACAAGACGTCCTCGTCATGGATAGACTGAATGAAACACTCTTCGAC
AAGACCTTTCGGGAGAAGGACTACACGCATGGGGTAATGCAGCTTATCTC
CAAGATGCACGAGAACATGGTATTTCACGGAGACATGCACTCGGGAAACA
TCATGATTGACGGAAACAATGACCCCATCATGATCGATTTTGGCAAGTCA
AAGTCGATGCCACAAGATCCCGAGGAGAAGAGGTGGTGCATGGTCCATGA
TCACGTTCTTCTATACAATTCGATCTCGAGGAAATCCGAGCTCAAGTCTA
TTCTTAGGGAGAAGATCTCAGAGTTGGCACCCGACCGTACGGTCCTCGGG
ACAACGTTCTTCATGAGCGAGTAAGTGTTCTCGCCGGGCAACGGGTCCAT
GGACGTTCCGATGAATGAATTCGCACTCGAGGTTGCGATCCAGTTGCACG
CGAGCTCGATAGGGATCTCGCCGAACGTGTACAACGCATGGATCTCGACG
TACTCCACGACGTGGGGAGACCGGGAACAAGACGTCCTCGTCATGGATAG
ACTGAATGAAACACTCTTCGACAAGACCTTTCGGGAGAAGGACTACACGC
ATGGGGTAATGCAGCTTATCTCCAAGATGCACGAGAACATGGTATTTCAC
GGAGACATGCACTCGGGAAACATCATGATTGACGGAAACAATGACCCCAT
CATGATCGATTTTGGCAAGTCAAAGTCGATGCCACAAGATCCCGAGGAGA
AGAGGTGGTGCATGGTCCATGATCACGTTCTTCTATACAATTCGATCTCG
AGGAAATCCGAGCTCAAGTCTATTCTTAGGGAGAAGATCTCAGAGTTGGC
ACCCGACCGTACGGTCCTCGGGACAACGTTCTTCATGAGCGAGTAA back to top
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