prot_E-fasciculatus_F_contig14820.3440.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14820.3440.1
Unique Nameprot_E-fasciculatus_F_contig14820.3440.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length225
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14820.3440.1 vs. uniprot
Match: D7G3Y0_ECTSI (Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Y0_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.960e-35
Identity = 89/112 (79.46%), Postives = 94/112 (83.93%), Query Frame = 0 
Query:   68 MVVSSLPASYAFGLVAAGSGA-AAAVGGRAGAANLAARCSSRLSALPTHSGGGGRSALGGFDRPRTLSAFGVLAAGEGQTTTAGRRISRRSKAGVLPLWGSSLSSSCSIYAN 178
            MVVSSLPASYAFGLVAAGSGA AAAVGGRAGAANLA  CSSRLSALPTH  G G+S+ GGFDR R LSAFG+ AAGEG+T TAGRRISRRSKAG LP W SS SSS + Y N
Sbjct:    1 MVVSSLPASYAFGLVAAGSGAVAAAVGGRAGAANLARCCSSRLSALPTH--GVGQSSPGGFDRSRRLSAFGIFAAGEGRTITAGRRISRRSKAGPLPSWTSSPSSSSAFYPN 110
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14820.3440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3Y0_ECTSI1.960e-3579.46Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14820contigE-fasciculatus_F_contig14820:2242..3209 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14820.3440.1mRNA_E-fasciculatus_F_contig14820.3440.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14820 2242..3210 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14820.3440.1 ID=prot_E-fasciculatus_F_contig14820.3440.1|Name=mRNA_E-fasciculatus_F_contig14820.3440.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=225bp
PHCCCCRWALARTLREMHSHTQCHLTPLQLQHRRDTAANGTATSTPATIV
SRSTSGRGGILRLGAAAMVVSSLPASYAFGLVAAGSGAAAAVGGRAGAAN
LAARCSSRLSALPTHSGGGGRSALGGFDRPRTLSAFGVLAAGEGQTTTAG
RRISRRSKAGVLPLWGSSLSSSCSIYANGGRSQGGGGGRARRRGLCSASS
DVAAASEGGGGAAVPTAVAEKKPAQ
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