mRNA_E-fasciculatus_F_contig1477.3407.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-fasciculatus_F_contig1477.3407.1
Unique Name	mRNA_E-fasciculatus_F_contig1477.3407.1
Type	mRNA
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)

Homology

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BLAST of mRNA_E-fasciculatus_F_contig1477.3407.1 vs. uniprot
Match: D7G6C5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C5_ECTSI)

HSP 1 Score: 1065 bits (2755), Expect = 0.000e+0
Identity = 582/635 (91.65%), Postives = 603/635 (94.96%), Query Frame = 1

Query:    7 MKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGMPISAERLALERTSSLPLARMQNVPPPPTGVVSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSDQDGFVTGKEAVDLFSKSRLPREQLRQIWQLADADGDSKLSRAEFCIGMHLIVCVSKKGLPCPMSRPPSLLPGPRSASGVVTSLAQAHGGSPATSVPPSPVVRXXXXXXXPSSPPAVMMPLGTVASNSDAFSALAVDLPTKDLMPTVGTEAEAKTPASEQGPPALEPPITSTQHQPNTAVSRSPTGTHVSENTSPEGESIPAGMQELSAASSAVLAMTRDASTAHSQAMAAQSSSVHSVKKLVEILKAEKESLSSIVEAGRATQTDNEQLLRDLGTELESLNHELDCLRNEYQKQQGETADLRARVARTGVDRATLLADIKACDSSIRTQKEENAFLRQHVLGENGTSEEKRSEPTTEDGEDEVSSLAGKMAEQREVSPAPEEAKPTTDAPPEPMMPAXXXXXXXHGMVPQPSAVEDPFAEVVGEQGSRSAGPSSPNPLGDEPPELNTAVEREQSGFDAFPAVDDAFENGTDPFAVDGLNANGSGEVVADPFTATDAVFTNATAAADGFDAFPAADAQQFDAFGQ 1911
            MKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPG+PISAERLALERTSS PLARMQNVPPPPTG VSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSD+DGFVTG EAVDLFSKSRLPRE    IWQLADADGDSKLS AEFCIGMHLIVCVSKKGLPCPM+RPPSLLPG RSASGVVT+ AQAHGGS ATSVPPSPVVR       PSSPPAVMMPLGT ASNSDAFSALAVDL TKDLM TVG+EAEAKTPASEQGPPALEPP+TSTQHQPNTAVSRSPTGTHVS++TSPEGES PAGMQELSAASSA+LA+TRDASTAHSQA AAQSSS+HS+KKLVEILKAEKESLSSIV+AGRATQTDNEQLLRD+GTELE+L HELDCLRNEYQKQQGETA+LRARVARTGVDRATLLA+IKACDSSIRTQKEENAFLRQHVLGENGT +EK SEPTT +GEDE SSLAGKMAEQ EVSPAPEEAKPTTDAPPEPMMPA XXXXXXHGMVPQP+AVEDPFAEVV EQGSRSAGPSSPNPLGDEPPELNTAVEREQSGFDAFPAVDDAFENGTDPFAVDGL+ANGSGE VADPFTATDAVFTNATAAADGFDAFPAADAQQFDAFGQ
Sbjct:    1 MKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGVPISAERLALERTSSFPLARMQNVPPPPTGSVSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSDRDGFVTGTEAVDLFSKSRLPRE----IWQLADADGDSKLSLAEFCIGMHLIVCVSKKGLPCPMTRPPSLLPGTRSASGVVTNPAQAHGGSLATSVPPSPVVRPSPAMRPPSSPPAVMMPLGTAASNSDAFSALAVDLATKDLMSTVGSEAEAKTPASEQGPPALEPPMTSTQHQPNTAVSRSPTGTHVSDHTSPEGESSPAGMQELSAASSALLAVTRDASTAHSQATAAQSSSIHSMKKLVEILKAEKESLSSIVKAGRATQTDNEQLLRDMGTELENLRHELDCLRNEYQKQQGETAELRARVARTGVDRATLLAEIKACDSSIRTQKEENAFLRQHVLGENGTLKEKDSEPTTANGEDEGSSLAGKMAEQLEVSPAPEEAKPTTDAPPEPMMPAKXXXXXXHGMVPQPTAVEDPFAEVVEEQGSRSAGPSSPNPLGDEPPELNTAVEREQSGFDAFPAVDDAFENGTDPFAVDGLSANGSGEAVADPFTATDAVFTNATAAADGFDAFPAADAQQFDAFGQ 631

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BLAST of mRNA_E-fasciculatus_F_contig1477.3407.1 vs. uniprot
Match: D7FK23_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK23_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 1.850e-77
Identity = 128/133 (96.24%), Postives = 130/133 (97.74%), Query Frame = 1

Query:    7 MKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGMPISAERLALERTSSLPLARMQNVPPPPTGVVSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSDQDGFVTGKEAVDLFSKSRLPRE 405
            MKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPG+PISAERLALERTSS PLARMQNVPPPPTG VSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSD+DGFVTG EAVDLFSKSRLPRE
Sbjct:    1 MKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGVPISAERLALERTSSFPLARMQNVPPPPTGSVSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSDRDGFVTGTEAVDLFSKSRLPRE 133

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BLAST of mRNA_E-fasciculatus_F_contig1477.3407.1 vs. uniprot
Match: A0A835ZIN7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIN7_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.260e-41
Identity = 95/180 (52.78%), Postives = 124/180 (68.89%), Query Frame = 1

Query:   10 KIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGMPISAERLALERTSSLPLARMQNVPPPPTGVV-SQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSDQDGFVTGKEAVDLFSKSRLPREQLRQIWQLADADGDSKLSRAEFCIGMHLIVCVSKKGLPCPMSRPPSL 546
            ++WDI A     N+L   +FY AMRLIAMAQ+  G P++ E+L +E T  +PLAR+Q V PP  G++ SQGL  SG +          DPY M  +E +KY+ +FP+YD D DGFVTG EAV LF+KS L R  L+Q+W +AD+D D++LSRAEF + MHLIVC+SKKGLP P + PPSL
Sbjct:   51 QVWDI-ADSSKQNFLTRPEFYCAMRLIAMAQS--GAPLTREKLIVEGTVPIPLARLQGVAPPSGGLMYSQGLGPSGPSQ--------DDPYFMLPEELAKYDMLFPSYDPDGDGFVTGAEAVPLFTKSGLDRGVLKQVWDMADSDRDARLSRAEFAVAMHLIVCISKKGLPVPPALPPSL 219

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BLAST of mRNA_E-fasciculatus_F_contig1477.3407.1 vs. uniprot
Match: A0A4D9DB77_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB77_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.110e-31
Identity = 84/189 (44.44%), Postives = 110/189 (58.20%), Query Frame = 1

Query:    1 LWMKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGMPISAERLALERTSSLPLARMQNVP--PPP-----TGVVSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSDQDGFVTGKEAVDLFSKSRLPREQLRQIWQLADADGDSKLSRAEFCIGMHLIVCVSKKGLPCPMSRPPSL 546
            L   IW + A     ++L  EDFYVA+RLI +AQ   G+  + E++    T+ +P AR  NVP  PPP     T    Q  A           L G D YAMS ++R++Y + F   D + DGFV G +AV+LFS+S L R  L ++W LADAD DS+LS  EF + MHLIVC+SK+GLP P   PPSL
Sbjct:   78 LLKNIWSL-ADSRQRHFLAREDFYVALRLIGLAQN--GIAPTREKIQETATAPVPYARFSNVPLAPPPLPAPATATPPQDPAXXXXXXXXXSSLEG-DGYAMSSEDRARYLNHFGPCDVNGDGFVDGPQAVELFSRSGLDRSVLGRVWDLADADNDSRLSPGEFAVAMHLIVCISKRGLPVPERLPPSL 262

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BLAST of mRNA_E-fasciculatus_F_contig1477.3407.1 vs. uniprot
Match: A0A0W8DN66_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DN66_PHYNI)

HSP 1 Score: 134 bits (336), Expect = 2.150e-30
Identity = 82/182 (45.05%), Postives = 105/182 (57.69%), Query Frame = 1

Query:   10 KIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGMPISAERLALERTSSLPLARMQNVPPP---PTGVVSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSDQDGFVTGKEAVDLFSKSRLPREQLRQIWQLADADGDSKLSRAEFCIGMHLIVCVSKKGLPCPMSRPPSL 546
            ++W I A     + L   +FYVAMRLI+MAQ   G  +SA+R     T   PL  M+ VPPP   P    +Q  A        H+   G+  YA++  E+SKY+ +F  YD+D+DGF+ G EAV LF  S L R  LR IW +AD   DSKLS  EF + MHLIVCVSK+GLP P + P  L
Sbjct:   35 EVWSI-ADSQRRSELSRNEFYVAMRLISMAQR--GEQVSAQRFFQLATMQYPLPMMEGVPPPQQQPVQPQAQMHAPQQDFGSVHQQPTGS--YALTTDEKSKYDIVFQQYDTDRDGFLMGTEAVALFQMSGLDRNMLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPREL 211

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BLAST of mRNA_E-fasciculatus_F_contig1477.3407.1 vs. uniprot
Match: A0A0P1A6M0_PLAHL (Transcription factor n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6M0_PLAHL)

HSP 1 Score: 138 bits (348), Expect = 1.090e-29
Identity = 87/203 (42.86%), Postives = 113/203 (55.67%), Query Frame = 1

Query:   10 KIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGMPISAERLALERTSSLPLARMQNVPPPPTGVVSQGLALSGGALVAHEPLVGA--------DPYAMSGQERSKYESIFPTYDSDQDGFVTGKEAVDLFSKSRLPREQLRQIWQLADADGDSKLSRAEFCIGMHLIVCVSKKGLPCPMSRPPSLLPGPRSASGVVTSLAQ 594
            +IW I+         R E FYVAMRLI+M Q   G  +S +R +     S PLA M  +PPP + +  Q +       +  EPL G+         PYA+S  E+SKY++IF  YD+D+DGF+ G EAV LF  S L R  LR IW +AD   DSKLS  EF + MHLIVCVSK+GLP P + P  L     S+ G   ++ Q
Sbjct:  593 EIWSIADAQQRSELSRNE-FYVAMRLISMIQR--GEQVSVQRFSQFAAMSYPLAMMDGMPPP-SSIQQQPIQSQESHPI--EPLCGSMQQQPTPTGPYALSADEKSKYDNIFQQYDTDRDGFIMGSEAVTLFQMSGLDRIVLRNIWSMADITQDSKLSAQEFYVAMHLIVCVSKRGLPMPATLPRELSETAFSSGGTFQNMTQ 789

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BLAST of mRNA_E-fasciculatus_F_contig1477.3407.1 vs. uniprot
Match: A0A5D6Y2G2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2G2_9STRA)

HSP 1 Score: 134 bits (338), Expect = 7.510e-29
Identity = 80/187 (42.78%), Postives = 106/187 (56.68%), Query Frame = 1

Query:   10 KIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGMPISAERLALERTSSLPLARMQNVPPPPTGVVSQGLALSGGALVAHEPLV-------GADPYAMSGQERSKYESIFPTYDSDQDGFVTGKEAVDLFSKSRLPREQLRQIWQLADADGDSKLSRAEFCIGMHLIVCVSKKGLPCPMSRPPSLL 549
            ++W + A       L   +FYVAMRLIAMAQ   G P+SA+R A    +  PL  +  VP PP   + Q  A +G       P            PYA++ +E+++Y++IF  YD+D+DGF+ G EAV LF  S L R  LR+IW LAD+  DSKL   EF + MHLIVC SK+GLP P   P  L+
Sbjct:   88 EVWGL-ADTQRKGELSRNEFYVAMRLIAMAQR--GEPVSAQRFAELAATPFPLPTLDGVPSPP---MHQQFATTGAGGFGSAPXXXXXXXXXARGPYAVTDEEKTRYDAIFAQYDADRDGFLLGGEAVSLFQLSGLDRNLLREIWALADSGQDSKLDVKEFYVAMHLIVCASKRGLPVPPQLPHELV 268

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BLAST of mRNA_E-fasciculatus_F_contig1477.3407.1 vs. uniprot
Match: A0A2D4BLT3_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLT3_PYTIN)

HSP 1 Score: 127 bits (319), Expect = 1.510e-28
Identity = 75/171 (43.86%), Postives = 99/171 (57.89%), Query Frame = 1

Query:   52 LRPEDFYVAMRLIAMAQASPGMPISAERLALERTSSLPLARMQNVPPPPTGVVSQGLALSGGALVAHEPLVGAD--PYAMSGQERSKYESIFPTYDSDQDGFVTGKEAVDLFSKSRLPREQLRQIWQLADADGDSKLSRAEFCIGMHLIVCVSKKGLPCPMSRPPSLLPGP 558
            L   +FYVAMRLI+MAQ   G  I+ +R      +  PL  +  VPPPP+   S        A+    P+ G    P+A++ +E+++Y+ IF   D+D+DGF+ G EAV LFSKS L R  LR IW +AD   DS+L   EF I MHLIVC+SK+GL  P   P  LL  P
Sbjct:  102 LSRNEFYVAMRLISMAQR--GEAINVQRFYEMAAAPFPLPTLDGVPPPPSPQSSFVPGAPQPAVPTPSPMGGPQKGPFAITDEEKARYDGIFQQXDTDRDGFLQGGEAVGLFSKSGLDRMILRDIWAMADRTQDSRLDAKEFYIAMHLIVCISKRGLSMPTEAPQELLESP 270

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BLAST of mRNA_E-fasciculatus_F_contig1477.3407.1 vs. uniprot
Match: W2ZUS1_PHYPR (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2ZUS1_PHYPR)

HSP 1 Score: 134 bits (336), Expect = 1.950e-28
Identity = 82/182 (45.05%), Postives = 105/182 (57.69%), Query Frame = 1

Query:   10 KIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGMPISAERLALERTSSLPLARMQNVPPP---PTGVVSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSDQDGFVTGKEAVDLFSKSRLPREQLRQIWQLADADGDSKLSRAEFCIGMHLIVCVSKKGLPCPMSRPPSL 546
            ++W I A     + L   +FYVAMRLI+MAQ   G  +SA+R     T   PL  M+ VPPP   P    +Q  A        H+   G+  YA++  E+SKY+ +F  YD+D+DGF+ G EAV LF  S L R  LR IW +AD   DSKLS  EF + MHLIVCVSK+GLP P + P  L
Sbjct:   87 EVWSI-ADSQRRSELSRNEFYVAMRLISMAQR--GEQVSAQRFFQLATMQYPLPMMEGVPPPQQQPVQPQAQMHAPQQDFGSVHQQPTGS--YALTTDEKSKYDIVFQQYDTDRDGFLMGTEAVALFQMSGLDRNMLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPREL 263

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BLAST of mRNA_E-fasciculatus_F_contig1477.3407.1 vs. uniprot
Match: A0A485LGQ3_9STRA (Aste57867_21084 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGQ3_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.450e-28
Identity = 77/199 (38.69%), Postives = 104/199 (52.26%), Query Frame = 1

Query:   10 KIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGMPISAERLALERTSSLPLARMQNVPPPPTGVVSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSDQDGFVTGKEAVDLFSKSRLPREQLRQIWQLADADGDSKLSRAEFCIGMHLIVCVSKKGLPCPMSRPPSLLPGPRSASGVVTSLAQAHGG 606
            ++W I A     + L P DFYVAMRLIAMAQ   G P++ +R      +   LA+++ VPPPP+ +  Q                    YA++  E++KY+ IF  YD+D DGF+ G +A  LF  S + R  LR +W LAD   D +L   EF + MHLIVCV+K+ LP P S PP +    R         A A GG
Sbjct:  105 EVWTI-ADSRQASQLLPGDFYVAMRLIAMAQQ--GQPVALQRFYELAAAPFALAQLEGVPPPPSAMPPQAT------------------YAITSDEKTKYQGIFAQYDTDHDGFLNGPDAAALFQMSGMDRNDLRTVWTLADRTSDGRLDMTEFYVAMHLIVCVTKRNLPLPSSIPPDMEQSLRPTGSFTQPPASAFGG 282

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1477.3407.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1477.3407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G6C5_ECTSI	0.000e+0	91.65	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D7FK23_ECTSI	1.850e-77	96.24	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A835ZIN7_9STRA	3.260e-41	52.78	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A4D9DB77_9STRA	1.110e-31	44.44	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A0W8DN66_PHYNI	2.150e-30	45.05	Uncharacterized protein n=1 Tax=Phytophthora nicot...	[more]
A0A0P1A6M0_PLAHL	1.090e-29	42.86	Transcription factor n=1 Tax=Plasmopara halstedii ...	[more]
A0A5D6Y2G2_9STRA	7.510e-29	42.78	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A2D4BLT3_PYTIN	1.510e-28	43.86	Uncharacterized protein n=2 Tax=Pythium insidiosum...	[more]
W2ZUS1_PHYPR	1.950e-28	45.05	Uncharacterized protein (Fragment) n=1 Tax=Phytoph...	[more]
A0A485LGQ3_9STRA	2.450e-28	38.69	Aste57867_21084 protein n=1 Tax=Aphanomyces stella...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1477	contig	E-fasciculatus_F_contig1477:2380..7898 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	1082.0
Seed ortholog evalue	0.0
Seed eggNOG ortholog	2880.D7G6C5
KEGG ko	ko:K12472
KEGG Pathway	ko04144,map04144
EggNOG free text desc.	endocytosis
EggNOG OGs	KOG0998@1,KOG0998@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko04131
Hectar predicted targeting category	other localisation
Ec32 ortholog description	EF-hand domain pair
Ec32 ortholog	Ec-10_001340.1
Exons	8
Model size	2432
Cds size	1908
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1477.3407.1	prot_E-fasciculatus_F_contig1477.3407.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	polypeptide	E-fasciculatus_F_contig1477 2386..7380 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927960.0434182-UTR-E-fasciculatus_F_contig1477:2379..2385	1622927960.0434182-UTR-E-fasciculatus_F_contig1477:2379..2385	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1477 2380..2385 +
1695995767.7392752-UTR-E-fasciculatus_F_contig1477:2379..2385	1695995767.7392752-UTR-E-fasciculatus_F_contig1477:2379..2385	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1477 2380..2385 +
1622927960.2133152-UTR-E-fasciculatus_F_contig1477:7380..7898	1622927960.2133152-UTR-E-fasciculatus_F_contig1477:7380..7898	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1477 7381..7898 +
1695995767.858159-UTR-E-fasciculatus_F_contig1477:7380..7898	1695995767.858159-UTR-E-fasciculatus_F_contig1477:7380..7898	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1477 7381..7898 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-fasciculatus_F_contig1477:2380..7898+
coding sequence from alignment at E-fasciculatus_F_contig1477:2380..7898+

protein sequence of mRNA_E-fasciculatus_F_contig1477.3407.1

>prot_E-fasciculatus_F_contig1477.3407.1 ID=prot_E-fasciculatus_F_contig1477.3407.1|Name=mRNA_E-fasciculatus_F_contig1477.3407.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=636bp
MKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGMPISAERLALERTS
SLPLARMQNVPPPPTGVVSQGLALSGGALVAHEPLVGADPYAMSGQERSK
YESIFPTYDSDQDGFVTGKEAVDLFSKSRLPREQLRQIWQLADADGDSKL
SRAEFCIGMHLIVCVSKKGLPCPMSRPPSLLPGPRSASGVVTSLAQAHGG
SPATSVPPSPVVRPSPAMRPPSSPPAVMMPLGTVASNSDAFSALAVDLPT
KDLMPTVGTEAEAKTPASEQGPPALEPPITSTQHQPNTAVSRSPTGTHVS
ENTSPEGESIPAGMQELSAASSAVLAMTRDASTAHSQAMAAQSSSVHSVK
KLVEILKAEKESLSSIVEAGRATQTDNEQLLRDLGTELESLNHELDCLRN
EYQKQQGETADLRARVARTGVDRATLLADIKACDSSIRTQKEENAFLRQH
VLGENGTSEEKRSEPTTEDGEDEVSSLAGKMAEQREVSPAPEEAKPTTDA
PPEPMMPAKTPPPPPHGMVPQPSAVEDPFAEVVGEQGSRSAGPSSPNPLG
DEPPELNTAVEREQSGFDAFPAVDDAFENGTDPFAVDGLNANGSGEVVAD
PFTATDAVFTNATAAADGFDAFPAADAQQFDAFGQ*

mRNA from alignment at E-fasciculatus_F_contig1477:2380..7898+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-fasciculatus_F_contig1477.3407.1 ID=mRNA_E-fasciculatus_F_contig1477.3407.1|Name=mRNA_E-fasciculatus_F_contig1477.3407.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5519bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1477:2380..7898+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTTTGGATGAAGATTTGGGACATATCTGCCGGAGATCCCAGTCTGAACTA
CTTGCGCCCGGAGGACTTCTATGTGGCGATGCGCCTGATCGCGATGGCGC
AGGTAAGACACGCCTGCTGATGGGTTCATGCATAAAAATACACGTGTTAC
ACGCCAGTACCTCACTTGTGTGCTCGTGCAACTTTACCACGGCGAGACCT
CGGTGCAGTTGACGAACATGCCATTCTACAGGTTGAATGGGCTGGCTATC
GAAGAATGTTCGGACTGATGGTCACTCGGTGACTTTTTCGGCACCGTTGA
TTGCGTACACTTGTTCACAAATGCCTACAATCCTTGCCTTTTTTATTCTC
ATGTTCTGTTTTTCAGGCGTCTCCAGGGATGCCAATCTCTGCCGAACGGT
TAGCGCTGGAACGAACGTCCTCTCTCCCACTCGCAAGGATGCAGAATGTC
CCCCCTCCGCCAACAGGGGTTGTTTCACAAGGTTTAGCACTTTCGGGTGG
CGCGTTAGTTGCGCATGAACCTCTGGTGGGTGCTGACCCGTATGCCATGT
CTGGCCAGGAGAGGTCCAAGTACGAATCAATCTTCCCGACGTACGACTCT
GATCAAGATGGATTTGTGACCGGCAAGGAGGCGGTAGATCTCTTCTCCAA
GTCCCGCCTTCCCCGCGAGGTGTGTAATTTGGGTGCCGTTAATGACGGTG
CCAGATTTGAGATATTTGCGCTAGGGTTTGCCCGATCGGGACTTACCCAC
GATGTCAAGCGATAACTTCTTCGCCCCAGAATCAATCCTGCAGCAACGTG
GTGAAGAATTCGATGTAGCGCGGCTTGGGCGCACTTTGTGTGGAGACTGG
GCATCGAAGAAAACGAGCGAAACACTATCTTGTTCTCACACAATCGCACC
CCGTTTGCCACTCTTGAAACAGCAATTGCGACAGATCTGGCAGCTAGCAG
ATGCGGACGGAGATAGCAAGCTCTCTCGGGCGGAATTCTGCATAGGCATG
CACTTGATCGTGTGTGTGAGCAAAAAGGGTCTGCCATGTCCGATGAGTCG
CCCCCCTAGCCTCCTCCCTGGTCCTCGCAGCGCCTCGGGTGTTGTGACAA
GCCTTGCACAAGCACATGGCGGTTCACCTGCCACATCTGTGCCGCCTTCG
CCGGTTGTGCGGCCGTCACCTGCAATGCGACCACCATCTTCGCCTCCTGC
GGTGATGATGCCGCTTGGAACTGTAGCTTCTAATTCCGACGCGTTCAGGT
CAGCACTACAGCAATTACTTGCTCTTCGTTGTGGAAGACAGGGTCATTTG
TGTGTGGTGATGTTGCAGAGTTGTGAGCAACGGTGACTTGTTGACTGTTC
TGTTTTGCTCAAGAAGCGGCAATCCTGTGTACAGGATTATACCACTTGGC
ATGTGTACGGCGGTGCATGTATCGTCAGGTCTTGACGTGGCGCCGTCTAG
AGTGGAGTGCGCGAGATGTGCAGTAGTAGGTTCAAGTCGTTTCATCATAG
ATTGTAATGTTCTACCCGTTTTTGCATGCCACCGGTAAAACCAACTTTGC
AGCGCCTTGGCGGTGGACCTTCCCACAAAGGATCTCATGCCTACAGTTGG
CACTGAAGCTGAAGCCAAAACGCCCGCGTCTGAGCAAGGCCCACCTGCTT
TGGAGCCACCAATAACGAGCACCCAACACCAACCAAACACAGCAGTTTCA
CGCTCGCCGACGGGAACGCATGTGTCCGAGAATACTTCGCCAGAGGGAGA
ATCAATTCCCGCGGGAATGCAGGAGCTTTCGGCAGCATCAAGTGCGGTTC
TGGCCATGACGCGCGACGCATCGACCGCTCACAGTCAGGTGCCATGGCGG
GGTCGTAGCGTAGGTTTCGACAGCGAAATAGATGATGGCACGAGTTCTCT
GTGCATGCAAACCCTCATCCTACGGTTATGCCCCCCTATTTCGTCACCGT
TAGGCGATGGCGGCACAGTCGTCCAGCGTGCACAGCGTGAAGAAGCTAGT
CGAGATCCTGAAGGCGGAAAAGGAATCATTGAGCTCTATCGTGGAGGCCG
GCAGGGTGAGCGAGACAAGGGCGTGGTCTAGAATTTGTAGTACGGCGCAT
TGCGTTAAGAAGAAAATGCATATCTAGCGCAAGGTCTCCTGACTTTGTTG
CAATGGGCAGCGGCTACGATACTGCCTGGATACCACTCCTTTGCGTGATT
GTGGCGATTGAAATGTCGGCCAGAGCTCTCTCCGCACCTTTGATGGCTAT
AATCCGACGACAACACACGTCATCTACTTCCGCATGGGCAACCTCGCACA
TTTTAGGCGACCCAAACGGACAATGAGCAACTACTTCGCGACCTGGGCAC
GGAGCTCGAAAGTCTCAATCATGAGCTGGATTGTCTTCGGAACGAGTATC
AGGTACGCGTAAGTTCGAGAGAACGGTTGAGAGCGTTGCTTTGTCGGGAT
GACGTGATCAAAAGCACCTAGGACGTGCGCCGTGTATCTTGCGTCTGGTG
CCGTATCATGAGGGAGACAGGACCAGGTCCGAGACAGAACACAACATGGC
TGCAATCATGGTGTGAGCGGGTTGTGATAAATCGGCGAACGTCGCTCGCA
AAAGCTCGCAAACGACGCCTTCGAACAACTCCGGGTCTCGTGGTGACTTC
AACGCGCTCGAGCAGACTCTACAGAAGCTGTGGTGTTACACCGTTATCAA
GAAGCGGGTACATCTCAATGGCTGCTACGATCGAAGCGAACGTTAGGATA
TTCTCCGGTGCCAAAAAGTAATGTCCGCCTGGAGGCTGGTGTGTCCCGAT
CAGGTATATTCGAAAAAGGCACGCGAATTAGGGACCGTTGACTTCGGTCC
AAACATGAACATTATCAACCGTGCATGTTACACGCCCCAGCACAAGTACC
CCATTACGACAACATGGCAGCACAGCAGCACACGTGATACAGTAGTCCAA
AGCAACCCCGTAAGCAACCTCGCTAGACACAGCTGTGTGGCAATGGGCCG
CGGTGTTTTTGGGGCACATGTATTTGCATGTCACCGCAAAAGCACGCGTG
ACTACACGTAAGCCCTACAAACGAAACAAGAATCCGGGAAATTCGAATTC
CGAATTCCGTGTCGTCTTCTCAATGTCGTCGTATTTTAACGGCACCCAAA
GAAACAACCAGGCATGCTCATGGACACTTCGGCGCATGCGCGCGCGTCCA
GCAGAGGCGACTTCGAGAGAACACACCCAACGCTCGCAGCCGTCGGGGTG
GTGACGTGGTGACGCATTCGATCGCCATATACTGTACTAGGAAAAATTAA
CACCATTCGAGACCTTTGTGGCGGCGACGGACGGTTCCCAGCTGATTGAT
CACACTCATACCAGCACCTTGGTTAGAAGCGGAATAGTTTGAGACGCATT
CCTGCCCCTTGCCCCCACGAGCCCATCCCATGTAGACCAATTCCATGTAG
ACCAAGACGTGTACGCGGTCAAAACATGAAATGGAGGGACCCCGGTGACC
GAAACTCTCTGAGCAAAACAATGTAGTTGGCCAATCATTGTTCTGAGGCC
CCCGGCATACTTTGGGGGTATGTCATGTTTTACTAAAGAAGCACCAAATC
AGCAGTGAAGCCAGTCACGAGCAATCTCTGCAGAATATGTGTCCCCTTGC
TGGGCTCTCACGCCTTTGCTGTATGGCGATTGCTCGTAGAGATCCCAAAG
TATGGGTCCTGGCGCGCTGGATGTTAATCGAGATGCACGCAAACCATGAT
GACAAATCCAGAAAAAATTCCAAAGTTTCCTAAATTCCAATTCAGAAGGA
GACGAATCCTGACAGCGAGAAAAACGCCAGTCGACCCATTACCTCACAAG
ACACACTATTAACCAGCCAACTTCCATACCCGAGTGCATTTGCGAACATG
TCGAAACGTGAGTGCTGACTGTCAGCTAACCATCGTGTCCTTGTTTATGT
GCTCCACTTGCTCTACCTTTCCTGTGGCCTTACAGAAGCAGCAGGGAGAG
ACGGCCGACCTACGTGCTCGTGTGGCACGAACAGGAGTGGATCGGGCTAC
TCTGCTGGCGGATATCAAGGCGTGCGACTCGTCAATTCGAACACAAAAGG
TCCGTGTGCGTCGCAGTCTGGCTCCGGTGTGGACGACCCATGGATTCGTC
GTTTGATAATACGCCATCGTGTTCCCCGGGTAAAGCACTTGACTTCGGTA
TTGCAAGCAATATCTGCATTTATCACGTGCTATCATTACGAACAGTACCG
AAAGATAATCGAGATCATCGTTCATTTTGCAGTGTGTCAACGAAACCCCA
CACTATCTACTTGCCACCGGCCCGCAAGCAACATGCTCGGCAACCGTCGG
TGTGCCTTGACACTCGGAAATTTGTGCTCAGCAATCCCGCATCCTTTATT
TTGTCCAATTTCCCAGGAAGAGAATGCCTTTCTACGTCAACACGTCCTGG
GTGAGAACGGTACCTCGGAAGAAAAACGCTCTGAGCCCACAACCGAGGAT
GGTGAGGACGAAGTGTCGTCCTTAGCAGGCAAGATGGCAGAGCAACGCGA
GGTCTCTCCCGCACCCGAAGAAGCTAAGCCCACAACCGACGCTCCACCAG
AGCCCATGATGCCCGCCAAAACACCGCCACCCCCTCCTCATGGCATGGTA
CCGCAACCTTCGGCTGTGGAAGACCCCTTCGCAGAAGTAGTCGGAGAACA
AGGCTCGAGGAGCGCCGGACCTTCGTCTCCCAATCCACTCGGGGATGAGC
CGCCGGAGTTGAACACTGCTGTGGAAAGAGAGCAGAGTGGATTCGACGCA
TTCCCTGCTGTCGACGATGCTTTCGAAAACGGAACGGACCCGTTTGCCGT
CGATGGGCTCAATGCAAACGGGTCGGGTGAGGTCGTGGCTGATCCATTCA
CAGCAACAGATGCTGTGTTCACAAACGCTACAGCCGCGGCCGATGGCTTC
GACGCTTTTCCGGCGGCCGATGCGCAGCAGTTTGATGCGTTTGGGCAGTA
GCGAGCGGCCCTCTCTCGGGCCAAGTATTGTCTGTTTTTCACGCGTACCT
TTTGGTTGTACTTTAGATTTCCGTCTAGTAGGGGAAATTGGTGACTGCAA
CGTGGAGATGCAGGCGTCCTGTCGAATACTCACTGAAATGTTGAAATGTT
TTTAAGTTTGAAGTGCTTGATACGTTGTTCCTTTAGTTTCTGAGATGTTT
TTGCAGTTTGTTGTAATATGGGGTATGTTTTGAAACTTGTATCTGGTTGA
TGGACTACTCGAATTCTCGAATTTGTTTTCAATCATCCCCCCAGCTACTC
GGAAGTTTCGCTCCCTGTTTCGCGAATTGCAGCGCGGATCTTTCCTTGAT
GCGGCGGAATATGGTCACAGCAGCACTGCGCCATTTCACACTTAATTTAC
TAATCTGCTCCCCAGTGAGCACCAGCTGTACCTGTGGACATAAGCAGCCA
ATGATGGACGTCGCGATTCCTGTCGATGAGTTGTCGCCTCCAGCATCATC
TTGTGGAAAAGTGTTGTCT

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1477:2380..7898+

>mRNA_E-fasciculatus_F_contig1477.3407.1 ID=mRNA_E-fasciculatus_F_contig1477.3407.1|Name=mRNA_E-fasciculatus_F_contig1477.3407.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3816bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1477:2380..7898+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAGATTTGGGACATATCTGCCGGAGATCCCAGTCTGAACTACTTGCG
CCCGGAGGACTTCTATGTGGCGATGCGCCTGATCGCGATGGCGCAGATGA
AGATTTGGGACATATCTGCCGGAGATCCCAGTCTGAACTACTTGCGCCCG
GAGGACTTCTATGTGGCGATGCGCCTGATCGCGATGGCGCAGGCGTCTCC
AGGGATGCCAATCTCTGCCGAACGGTTAGCGCTGGAACGAACGTCCTCTC
TCCCACTCGCAAGGATGCAGAATGTCCCCCCTCCGCCAACAGGGGTTGTT
TCACAAGGTTTAGCACTTTCGGGTGGCGCGTTAGTTGCGCATGAACCTCT
GGTGGGTGCTGACCCGTATGCCATGTCTGGCCAGGAGAGGTCCAAGTACG
AATCAATCTTCCCGACGTACGACTCTGATCAAGATGGATTTGTGACCGGC
AAGGAGGCGGTAGATCTCTTCTCCAAGTCCCGCCTTCCCCGCGAGGCGTC
TCCAGGGATGCCAATCTCTGCCGAACGGTTAGCGCTGGAACGAACGTCCT
CTCTCCCACTCGCAAGGATGCAGAATGTCCCCCCTCCGCCAACAGGGGTT
GTTTCACAAGGTTTAGCACTTTCGGGTGGCGCGTTAGTTGCGCATGAACC
TCTGGTGGGTGCTGACCCGTATGCCATGTCTGGCCAGGAGAGGTCCAAGT
ACGAATCAATCTTCCCGACGTACGACTCTGATCAAGATGGATTTGTGACC
GGCAAGGAGGCGGTAGATCTCTTCTCCAAGTCCCGCCTTCCCCGCGAGCA
ATTGCGACAGATCTGGCAGCTAGCAGATGCGGACGGAGATAGCAAGCTCT
CTCGGGCGGAATTCTGCATAGGCATGCACTTGATCGTGTGTGTGAGCAAA
AAGGGTCTGCCATGTCCGATGAGTCGCCCCCCTAGCCTCCTCCCTGGTCC
TCGCAGCGCCTCGGGTGTTGTGACAAGCCTTGCACAAGCACATGGCGGTT
CACCTGCCACATCTGTGCCGCCTTCGCCGGTTGTGCGGCCGTCACCTGCA
ATGCGACCACCATCTTCGCCTCCTGCGGTGATGATGCCGCTTGGAACTGT
AGCTTCTAATTCCGACGCGTTCAGCAATTGCGACAGATCTGGCAGCTAGC
AGATGCGGACGGAGATAGCAAGCTCTCTCGGGCGGAATTCTGCATAGGCA
TGCACTTGATCGTGTGTGTGAGCAAAAAGGGTCTGCCATGTCCGATGAGT
CGCCCCCCTAGCCTCCTCCCTGGTCCTCGCAGCGCCTCGGGTGTTGTGAC
AAGCCTTGCACAAGCACATGGCGGTTCACCTGCCACATCTGTGCCGCCTT
CGCCGGTTGTGCGGCCGTCACCTGCAATGCGACCACCATCTTCGCCTCCT
GCGGTGATGATGCCGCTTGGAACTGTAGCTTCTAATTCCGACGCGTTCAG
CGCCTTGGCGGTGGACCTTCCCACAAAGGATCTCATGCCTACAGTTGGCA
CTGAAGCTGAAGCCAAAACGCCCGCGTCTGAGCAAGGCCCACCTGCTTTG
GAGCCACCAATAACGAGCACCCAACACCAACCAAACACAGCAGTTTCACG
CTCGCCGACGGGAACGCATGTGTCCGAGAATACTTCGCCAGAGGGAGAAT
CAATTCCCGCGGGAATGCAGGAGCTTTCGGCAGCATCAAGTGCGGTTCTG
GCCATGACGCGCGACGCATCGACCGCTCACAGTCAGCGCCTTGGCGGTGG
ACCTTCCCACAAAGGATCTCATGCCTACAGTTGGCACTGAAGCTGAAGCC
AAAACGCCCGCGTCTGAGCAAGGCCCACCTGCTTTGGAGCCACCAATAAC
GAGCACCCAACACCAACCAAACACAGCAGTTTCACGCTCGCCGACGGGAA
CGCATGTGTCCGAGAATACTTCGCCAGAGGGAGAATCAATTCCCGCGGGA
ATGCAGGAGCTTTCGGCAGCATCAAGTGCGGTTCTGGCCATGACGCGCGA
CGCATCGACCGCTCACAGTCAGGCGATGGCGGCACAGTCGTCCAGCGTGC
ACAGCGTGAAGAAGCTAGTCGAGATCCTGAAGGCGGAAAAGGAATCATTG
AGCTCTATCGTGGAGGCCGGCAGGGCGATGGCGGCACAGTCGTCCAGCGT
GCACAGCGTGAAGAAGCTAGTCGAGATCCTGAAGGCGGAAAAGGAATCAT
TGAGCTCTATCGTGGAGGCCGGCAGGGCGACCCAAACGGACAATGAGCAA
CTACTTCGCGACCTGGGCACGGAGCTCGAAAGTCTCAATCATGAGCTGGA
TTGTCTTCGGAACGAGTATCAGGCGACCCAAACGGACAATGAGCAACTAC
TTCGCGACCTGGGCACGGAGCTCGAAAGTCTCAATCATGAGCTGGATTGT
CTTCGGAACGAGTATCAGAAGCAGCAGGGAGAGACGGCCGACCTACGTGC
TCGTGTGGCACGAACAGGAGTGGATCGGGCTACTCTGCTGGCGGATATCA
AGGCGTGCGACTCGTCAATTCGAACACAAAAGAAGCAGCAGGGAGAGACG
GCCGACCTACGTGCTCGTGTGGCACGAACAGGAGTGGATCGGGCTACTCT
GCTGGCGGATATCAAGGCGTGCGACTCGTCAATTCGAACACAAAAGGAAG
AGAATGCCTTTCTACGTCAACACGTCCTGGGTGAGAACGGTACCTCGGAA
GAAAAACGCTCTGAGCCCACAACCGAGGATGGTGAGGACGAAGTGTCGTC
CTTAGCAGGCAAGATGGCAGAGCAACGCGAGGTCTCTCCCGCACCCGAAG
AAGCTAAGCCCACAACCGACGCTCCACCAGAGCCCATGATGCCCGCCAAA
ACACCGCCACCCCCTCCTCATGGCATGGTACCGCAACCTTCGGCTGTGGA
AGACCCCTTCGCAGAAGTAGTCGGAGAACAAGGCTCGAGGAGCGCCGGAC
CTTCGTCTCCCAATCCACTCGGGGATGAGCCGCCGGAGTTGAACACTGCT
GTGGAAAGAGAGCAGAGTGGATTCGACGCATTCCCTGCTGTCGACGATGC
TTTCGAAAACGGAACGGACCCGTTTGCCGTCGATGGGCTCAATGCAAACG
GGTCGGGTGAGGTCGTGGCTGATCCATTCACAGCAACAGATGCTGTGTTC
ACAAACGCTACAGCCGCGGCCGATGGCTTCGACGCTTTTCCGGCGGCCGA
TGCGCAGCAGTTTGATGCGTTTGGGCAGTAGGAAGAGAATGCCTTTCTAC
GTCAACACGTCCTGGGTGAGAACGGTACCTCGGAAGAAAAACGCTCTGAG
CCCACAACCGAGGATGGTGAGGACGAAGTGTCGTCCTTAGCAGGCAAGAT
GGCAGAGCAACGCGAGGTCTCTCCCGCACCCGAAGAAGCTAAGCCCACAA
CCGACGCTCCACCAGAGCCCATGATGCCCGCCAAAACACCGCCACCCCCT
CCTCATGGCATGGTACCGCAACCTTCGGCTGTGGAAGACCCCTTCGCAGA
AGTAGTCGGAGAACAAGGCTCGAGGAGCGCCGGACCTTCGTCTCCCAATC
CACTCGGGGATGAGCCGCCGGAGTTGAACACTGCTGTGGAAAGAGAGCAG
AGTGGATTCGACGCATTCCCTGCTGTCGACGATGCTTTCGAAAACGGAAC
GGACCCGTTTGCCGTCGATGGGCTCAATGCAAACGGGTCGGGTGAGGTCG
TGGCTGATCCATTCACAGCAACAGATGCTGTGTTCACAAACGCTACAGCC
GCGGCCGATGGCTTCGACGCTTTTCCGGCGGCCGATGCGCAGCAGTTTGA
TGCGTTTGGGCAGTAG