mRNA_E-fasciculatus_F_contig14755.3397.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14755.3397.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI) HSP 1 Score: 146 bits (368), Expect = 4.550e-40 Identity = 74/80 (92.50%), Postives = 77/80 (96.25%), Query Frame = 1
Query: 1 MSAAKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 240
M++ KPTYN MVFDAIKTLKERNGSSIQAIKKSITATYP LNFTPHQMRSALKKGVESGKF+KMKASYKLSAEAKKPAPK
Sbjct: 1 MASTKPTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80
BLAST of mRNA_E-fasciculatus_F_contig14755.3397.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE) HSP 1 Score: 141 bits (356), Expect = 9.040e-37 Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 1
Query: 10 AKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAP 237
AKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYP LNFTPHQMR ALKKGVESGKF+KMKASYKLS EAKKPAP
Sbjct: 97 AKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPAP 172
BLAST of mRNA_E-fasciculatus_F_contig14755.3397.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE) HSP 1 Score: 132 bits (332), Expect = 1.740e-34 Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 1
Query: 31 MVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 240
MVFDAIKTLKERNGSSIQAIKKSITATYP LNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK
Sbjct: 1 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 70
BLAST of mRNA_E-fasciculatus_F_contig14755.3397.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI) HSP 1 Score: 126 bits (317), Expect = 5.200e-32 Identity = 64/70 (91.43%), Postives = 69/70 (98.57%), Query Frame = 1
Query: 31 MVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 240
MVFDAIK+LKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVE+GKF+K+K+SYKLSAEAKKP PK
Sbjct: 1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPVPK 70
BLAST of mRNA_E-fasciculatus_F_contig14755.3397.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI) HSP 1 Score: 123 bits (309), Expect = 4.980e-31 Identity = 61/77 (79.22%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 4 SAAKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPA 234
+ AKPTY+VMVFDAIK LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKG ESGKF+K+K+SYKLS EAKKPA
Sbjct: 3 TTAKPTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 79
BLAST of mRNA_E-fasciculatus_F_contig14755.3397.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.950e-26 Identity = 55/68 (80.88%), Postives = 61/68 (89.71%), Query Frame = 1
Query: 31 MVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPA 234
MVFDAIK LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKG ESGKF+K+K+SYKLS EAKKPA
Sbjct: 1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 68
BLAST of mRNA_E-fasciculatus_F_contig14755.3397.1 vs. uniprot
Match: A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE) HSP 1 Score: 100 bits (250), Expect = 2.110e-23 Identity = 50/61 (81.97%), Postives = 58/61 (95.08%), Query Frame = 1
Query: 31 MVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVESGKFVKMKASYKLS 213
MVFDAIKTLKERNGSSIQA+KKSITATYPAL+FTPHQMRSALKKGVE+GKF+K++ + L+
Sbjct: 1 MVFDAIKTLKERNGSSIQAMKKSITATYPALHFTPHQMRSALKKGVETGKFIKVRHALPLA 61
BLAST of mRNA_E-fasciculatus_F_contig14755.3397.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 1.140e-21 Identity = 50/72 (69.44%), Postives = 57/72 (79.17%), Query Frame = 1
Query: 16 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKP 231
PTY+ M AI LKERNGSS+ AIKK I ATYP LNF PHQ+R ALKKG E+G F+K+KASYK+S EAKKP
Sbjct: 2 PTYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKP 73
BLAST of mRNA_E-fasciculatus_F_contig14755.3397.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI) HSP 1 Score: 101 bits (251), Expect = 3.130e-21 Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 1
Query: 16 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 240
PTY+ M +A+K LKERNGSS+ AIKK ITA+YP+L FT H MRSALKKGVESGKF+K+K SYKLSA ++PA K
Sbjct: 2 PTYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPAAK 76
BLAST of mRNA_E-fasciculatus_F_contig14755.3397.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 2.800e-19 Identity = 48/67 (71.64%), Postives = 57/67 (85.07%), Query Frame = 1
Query: 16 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVESGKFVKMKASYKLSA 216
PTY+ M +A+K LKERNGSS+ AIKK ITA+YP+L FT H +RSALKKGVESGKF+K+K SYKLSA
Sbjct: 2 PTYDEMTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLSA 68 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14755.3397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14755.3397.1 >prot_E-fasciculatus_F_contig14755.3397.1 ID=prot_E-fasciculatus_F_contig14755.3397.1|Name=mRNA_E-fasciculatus_F_contig14755.3397.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=159bp MSAAKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSback to top mRNA from alignment at E-fasciculatus_F_contig14755:416..2474+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14755.3397.1 ID=mRNA_E-fasciculatus_F_contig14755.3397.1|Name=mRNA_E-fasciculatus_F_contig14755.3397.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2059bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14755:416..2474+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14755:416..2474+ >mRNA_E-fasciculatus_F_contig14755.3397.1 ID=mRNA_E-fasciculatus_F_contig14755.3397.1|Name=mRNA_E-fasciculatus_F_contig14755.3397.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=954bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14755:416..2474+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |