prot_E-fasciculatus_F_contig14700.3374.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14700.3374.1
Unique Nameprot_E-fasciculatus_F_contig14700.3374.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length72
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14700.3374.1 vs. uniprot
Match: D8LFA2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA2_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 3.170e-25
Identity = 60/63 (95.24%), Postives = 60/63 (95.24%), Query Frame = 0 
Query:    1 MKREAAARRKAEKRARDREERRNKQMELGWAGRSGGFDARPTSKGSVHSSNGRGGSLPRVSGA 63
            MKREAAAR  AEKRARDREERRNKQMELGWAGRSGGFDARPTSKGSVHSSNGRGG LPRVSGA
Sbjct:  956 MKREAAARXXAEKRARDREERRNKQMELGWAGRSGGFDARPTSKGSVHSSNGRGGGLPRVSGA 1018
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BLAST of mRNA_E-fasciculatus_F_contig14700.3374.1 vs. uniprot
Match: A0A6H5KVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD9_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 5.570e-22
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0 
Query:   11 AEKRARDREERRNKQMELGWAGRSGGFDARPTSKGSVHSSNGRGGSLPRVSGA 63
            AEKRARDREERRNKQMELGWAGRSGGFDARPTSKGSVHSSNGRGG LPRVSGA
Sbjct: 1016 AEKRARDREERRNKQMELGWAGRSGGFDARPTSKGSVHSSNGRGGGLPRVSGA 1068
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14700.3374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFA2_ECTSI3.170e-2595.24Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KVD9_9PHAE5.570e-2298.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14700contigE-fasciculatus_F_contig14700:453..1062 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14700.3374.1mRNA_E-fasciculatus_F_contig14700.3374.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14700 413..1085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14700.3374.1 ID=prot_E-fasciculatus_F_contig14700.3374.1|Name=mRNA_E-fasciculatus_F_contig14700.3374.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=72bp
MKREAAARRKAEKRARDREERRNKQMELGWAGRSGGFDARPTSKGSVHSS
NGRGGSLPRVSGADKNQTRPG*
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