prot_E-fasciculatus_F_contig14568.3292.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14568.3292.1
Unique Nameprot_E-fasciculatus_F_contig14568.3292.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length175
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14568.3292.1 vs. uniprot
Match: D8LD24_ECTSI (THO complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD24_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 5.820e-48
Identity = 119/183 (65.03%), Postives = 123/183 (67.21%), Query Frame = 0 
Query:    1 GDAGGGRFEGPARAGXXXXXXXXXXXXXXXXXXXXXXXXSSRGSKRGRSSEPERSXXXXXXXLGYDGPGSAEGDPSQAFDSKRMRQPDQTMMPQPEGGGGRRGSVKSPVDRWGRGHGXXXXXXP---WEREGPAAPSDANSGRYHDDLRHGXXXXG-----RMQMPSHEMPDRPAAYEARGRG 175
            GDAGG RFEGPARAG                         SRGSKRGRS+EPERS        GYDGPGSAEGDPSQAFDSKRMRQPDQ MMP PEGGGGRRGS KS  DRWGRG+GXXXXXX    WEREGPAAP+DAN           XXXX      RMQMPSHE+PDRPAAYEARGRG
Sbjct: 2060 GDAGGVRFEGPARAGGGQRTTAESSRSGGGA--------GSRGSKRGRSAEPERSGGRDGG--GYDGPGSAEGDPSQAFDSKRMRQPDQAMMPHPEGGGGRRGSAKSSADRWGRGYGXXXXXXXXXXWEREGPAAPNDANXXXXXXXXXXXXXXXXXXXXXRMQMPSHEVPDRPAAYEARGRG 2232
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14568.3292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD24_ECTSI5.820e-4865.03THO complex subunit 2 n=2 Tax=Ectocarpus TaxID=287... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14568contigE-fasciculatus_F_contig14568:1427..1951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14568.3292.1mRNA_E-fasciculatus_F_contig14568.3292.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14568 1427..1951 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14568.3292.1 ID=prot_E-fasciculatus_F_contig14568.3292.1|Name=mRNA_E-fasciculatus_F_contig14568.3292.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=175bp
GDAGGGRFEGPARAGGGQRTTAESSRSGGGGGGGGGGGASSRGSKRGRSS
EPERSGGRDGGGLGYDGPGSAEGDPSQAFDSKRMRQPDQTMMPQPEGGGG
RRGSVKSPVDRWGRGHGGGGGGGPWEREGPAAPSDANSGRYHDDLRHGGG
GGGRMQMPSHEMPDRPAAYEARGRG
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