mRNA_E-fasciculatus_F_contig1453.3274.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1453.3274.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 778 bits (2010), Expect = 4.010e-266 Identity = 450/504 (89.29%), Postives = 472/504 (93.65%), Query Frame = 3
Query: 18 GLNCCTSDITDMCSATNGAAPCIVDGDSTGPTPTPXXXXXXXXXXXXXXXXXGTIASISTSSDSSSFSGGGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSATPTGYWLLTSSLEVLDGVTLYVHGTSDGGDADVLRIQSTKDVFWEIRAWGGNLSFKGTTVTSWDTDEGKERVLSDVNKGRSFINCVTQFDDSDIWSCSGRSNKEKGTCRMDIIDSTMGNMGYYDAESYGLTWKVRGLCTDLSNVEIMDDHNVYGDIINSEIYGMYYGMYSYGHQGGVWTDNIMRDNILYGFDPHDDSDYLTIARNTVYGNGNHGIIASKRCNNVEIYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFNADIYDNTIENCKYGIRLSVGSADNDIHDNTFDSSSTYGLYTYEGSDETYVSDN-GRVKDNSFDSNVISNTDVATKIKQGDGNSFTNNKFESVKTFEFEDSTDTVWTNNDIGDGCLDESTDFTSGSIPSC 1526
G +CCTSDI+++CS T GAAPCIVDGDSTGPTPTPXXXXXXXXXXXXXXXXXGTIASISTSSDSSSFSGGGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSA+PTGYWLLTSSLE+LDGVTLYVHGTS GGDADVLRIQST D FWEIR WGG+LSF TTVTSWDTD+G+ER + GRSFINCVTQFDDSDIWSCSGRSNKE+G CRMDIIDSTMGNMG++DAESYGLTWKVRGLC+DLSNVEIMDDHNVYGDI SEIYGMYYGMYSYGHQGGVWTDN+MRDNILYGFDPHDDSD LTIA NTVYGNGNHGIIASKRCNNVEIY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESF A+IYDNTIENCKYGIRLS+GSADNDIHDNTFDSSSTYGLYTY+GSD+ VS N GRVKDNSFD+N ISNTDVA KIK+GD NSFTNN FE+VKTFEFEDSTDTVWTNNDIG GCLDESTDF SGSIPSC
Sbjct: 345 GADCCTSDISNLCSVT-GAAPCIVDGDSTGPTPTPXXXXXXXXXXXXXXXXXGTIASISTSSDSSSFSGGGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQSTDDDFWEIRGWGGSLSFLETTVTSWDTDKGEERT--EYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDIGGGCLDESTDFASGSIPSC 845
BLAST of mRNA_E-fasciculatus_F_contig1453.3274.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 500 bits (1288), Expect = 3.480e-161 Identity = 267/459 (58.17%), Postives = 310/459 (67.54%), Query Frame = 3
Query: 183 ASISTSSDSSSFSGGGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSATPTGYWLLTSSLEVLDGVTLYVHGTSDGGDADVLRIQSTKDVFWEIRAWGGNLSFKGTTVTSWDTDEGKERVLSDVNKGRSFINCVTQFDDSDIWSCSGRSNKEKGTCRMDIIDSTMGNMGYYDAESYGLTWKVRGLC-----TDLS-NVEIMDDHNVYGDIINSEIYGMYYGMYSYGHQGGVWTDNIMRDNILYGFDPHDDSDYLTIARNTVYGNGNHGIIASKRCNNVEIY--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFNADIYDNTIENCKYGIRLSVGSADNDIHDNTFDSSSTYGLYTYEGSDETYV-SDNGRVKDNSFDSNVISNT--DVATKIKQGDGNSFTNNKFESVKTFEFEDSTDTVWTNNDIGDGCLDESTDFTSGSIPSC 1526
A++ + D + F GGGC TLT MY Q G GPLYVLD +N++V G TPTGYWLL +L V+DG TL VHGT+ GDADVLR+ ST D F E+R +GGNL F+ TTVTSWDTD G+ER GRSFINCVTQFDDS IW C GRSN+E G CRMDII STMGNMG++DAESYGLTWKVRG C T + N EI +DHNVYGDI+NSEIYGMYYG YSYGHQGGVW NIMRDNI YGFDPHDDSD LTI+ N VYGNGNHGIIASKRCNNV+I+ + A+MES++A+IYDN+ NC+YGIRLS+GS N I +N F + YGLYTY GSD+ V + NGR DN FD N I ++ IK+GD N F +N F V T+EFEDS+DT W +N G GCLD STDF G I C
Sbjct: 182 ATVRFTDDIAYFEGGGCGTLTQMYEAQEGDGPLYVLDENNDVVGG-----TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTSDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWD--GDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDN-TGGGCLDGSTDFAEGGITEC 632
BLAST of mRNA_E-fasciculatus_F_contig1453.3274.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI) HSP 1 Score: 495 bits (1274), Expect = 1.820e-158 Identity = 317/529 (59.92%), Postives = 368/529 (69.57%), Query Frame = 3
Query: 3 CGDRNGL---NCCTSDITD---MCSATNGAAPCIVDGDSTGP-------TPTPXXXXXXXXXXXXXXXXX------GTIASISTSSDSSSFSGGGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSATPTGYWLLTSSLEVLDGVTLYVHGTSDGGDADVLRIQSTKDVFWEIRAWGGNLSFKGTTVTSWDTDEGKERVLSDVNKGRSFINCVTQFDDSDIWSCSGRSNKEKGTCRMDIIDSTMGNMGYYDAESYGLTWKVRGLCTDLSNVEIMDDHNVYGDIINSEIYGMYYGMYSYGHQGGVWTDNIMRDNILYGFDPHDDSDYLTIARNTVYGNGNHGIIASKRCNNVEIYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFNADIYDNTIENCKYGIRLSVGSADNDIHDNTFDSSSTYGLYTYEGSDETYVSDNGRVKDNSFDSNVISNTDVATKIKQGDGNSFTNNKFESVKTFEFEDSTDTVWTNNDIGDGCLDESTDFTSGS--IPSC 1526
C R GL +CC I + +CS T G APC VDGDS+ P +PTP XXXXXX T A++ D++ F GGCATLTD+YN Q G+GPL+VLDS++N V G GGSA PTG WLLTS++++ D TL+V G GGD DVLRI+ST +WEI GGN+ F+GT VTSWDT +GKER N+GRSFI C+TQ+DD+ +SCSG SNK+ GTCRMDIIDSTMGNMGY +ESYGLTWKVRGLC +LSN+++ D NVYGDI NS+IYGMYYGMYSYGH+GGVWT+N M DN+ YGFDPHDDSD L IA N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA +ESF+ADIYDN I NCKYGIRLS+GS DNDI +NTFD+ S YGLYTY+GSD VS NGR K N F+ N +SNT + K+GD N F NN F +V TFEFE S DT WT N +G GCLD DFT GS IP C
Sbjct: 156 CSQRPGLTDSDCCIGKIEESGPLCSVT-GKAPCFVDGDSSAPEQTSPVPSPTPKTXXXXXXRSATPTPPTPVPSGCDTKATVQIDKDTAYFKSGGCATLTDLYNAQDGTGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSKYWEIFGHGGNMYFEGTKVTSWDTSKGKEREYK-KNEGRSFIRCITQYDDN--YSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKNLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLVIAHNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLESFDADIYDNRIVNCKYGIRLSLGSGDNDITNNTFDNISKYGLYTYKGSDSPDVS-NGRPKGNKFEGNTVSNTKIGVLGKEGDDNIFKNNVFTNVDTFEFEKSKDTEWTGNSLGGGCLDRGKDFTKGSDTIPDC 679
BLAST of mRNA_E-fasciculatus_F_contig1453.3274.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 385 bits (989), Expect = 2.050e-114 Identity = 215/448 (47.99%), Postives = 272/448 (60.71%), Query Frame = 3
Query: 222 GGGCATLTDMYNTQ------SGSGPLYVLDSSNNIVSGGGGSATPTGYWLLTSSLEVLDGVTLYVHGTSDGGDADVLRIQST-KDVFWEIRAWGGNLSFKGTTVTSWDTDEGKERVLSDVNKGRSFINCVTQFDDSDIWSCSGRSNKEKGTCRMDIIDSTMGNMGYYDAESYGLTWKVRGLCTDLSNVEIMDDHNVYGDIINSEIYGMYYGMYSYGHQGGVWTDNIMRDNILYGFDPHDDSDYLTIARNTVYGNGNHGIIASKRCNNVEIYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALMESFNADIYDNTIENCKYGIRLSVGSADNDIHDNTFDSSSTYGLYTYEGSDETYVSDNGRVKDNSFDSNVISNTDVATKIKQGDGNSFTNNKFESVKTFEFEDSTDTVWTNNDIGDGCLDESTDFT----SGSIPSC 1526
G GC T+TD+YN + S GP+Y+LD + G T WLL + L + G Y GTS GGD + LRIQST D F E+R GG+L F+ T VTSWDT + + GRSF+NCV++ D C G + E G CRMDII+S + +GY+D+ESYG+TWKVRG C DLSN E+ + NVYGD+ S+I+ +YYG YSYGHQGGVWT+N M DN YGFDPHDDSDYLTIA N VY N NHGIIASKRCNNV+I++ A++ESF+A IY N I KYGIR+S+GS +N+++ N+F S YGLYTYEGSDE VSD GR N N++ + + KIK+GD N F N F +V FEF +ST+T+W+ NDIGDGC++E +F S SIP C
Sbjct: 446 GEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGI---TNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQET--YENGRSFLNCVSEKLTGD--DCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVSD-GRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDGCIEEDDEFDAASGSDSIPIC 885
BLAST of mRNA_E-fasciculatus_F_contig1453.3274.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 370 bits (949), Expect = 4.230e-109 Identity = 215/434 (49.54%), Postives = 269/434 (61.98%), Query Frame = 3
Query: 222 GGGCATLTDMYNTQSG---SGPLYVLDSSNNIVSGGGGSATPTGYWLLTSSLEVLDGVTLYVHGTSDGGDADVLRIQST--KDVFWEIRAWGGNLSFKGTTVTSWDTDEGKERVLSDVNKGRSFINCVTQFDDSDIWSCSGRSNKEKGTCRMDIIDSTMGNMGYYDAESYGLTWKVRGLCTDLSNVEIMDDHNVYGDIINSEIYGMYYGMYSYGHQGGVWTDNIMRDNILYGFDPHDDSDYLTIARNTVYGNGNHGIIASKRCNNVEIYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALMESFNADIYDNTIENCKYGIRLSVGSADNDIHDNTFDSSSTYGLYTYEGSDETYVSDN--GRVKDNSFDSNVISNTDVATKIKQGDGNSFTNNKF---ESVKTFEFEDSTDTVWTNNDIGDG-CL 1484
GGGCATLTD+Y Q G GPL+VLDS++N+V G +PTGYWLL + V +G L VHG GGDA VLRIQST +D ++EIR GG+LSF T VTSWDTDE K V ++ K RSFI CV++ +C G + G CRMDII S MG MGY AESYG++WKVRG C++ N E+ + V GDII+S+IYGMYYG YS+GH GG+WT N M DN YGFDPHDDSD L IA NTV+GNGNHGIIASKRCNNV+I+ A+MES A I+DNT N KYGIRLSVG+A N + +N+F YG+YTY+G+D+ S + G + DN+F +N + + KI++ +G FT+N F S + + FED D VWTNN + D CL
Sbjct: 404 GGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGG-----SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRD-YYEIRGHGGSLSFMDTKVTSWDTDEKK--VNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDICL 826
BLAST of mRNA_E-fasciculatus_F_contig1453.3274.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 350 bits (899), Expect = 1.160e-106 Identity = 203/444 (45.72%), Postives = 261/444 (58.78%), Query Frame = 3
Query: 222 GGGCATLTDMY------NTQSGSGPLYVLDSSNNIVSGGGGSATPTGYWLLTSSLEVLDGVTLYVHGTSDGGDADVLRIQSTKDV-FWEIRAWGGNLSFKGTTVTSWDTDEGKERVLSDVNKGRSFINCVTQFDDSDIWSCSGRSNKEKGTCRMDIIDSTMGNMGYYDAESYGLTWKVRGLCTDLSNVEIMDDHNVYGDIINSEIYGMYYGMYSYGHQGGVWTDNIMRDNILYGFDPHDDSDYLTIARNTVYGNGNHGIIASKRCNNVEIYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALMESFNADIYDNTIENCKYGIRLSVGSADNDIHDNTFDSSSTYGLYTYEGSDETYVSDNGRVKDNSFDSNVISNTDVATKIKQGDGNSFTNNKFESVKTFEFEDSTDTVWTNNDIGDG-CL---DESTDFTSGS 1514
GGGC TL+D+Y N + GP++VLDS++ + + T TG WLLT+ L V G TLY G GG+ LRI+ST F+EIR GGNL F+ T VTSWD D K + GRSFI CV++ + + G CRMDIIDS MG +GY +E+YG+TWKVRG C+DLSN ++ DD NVYGD+ S+I+ MYYGMYS+GHQGGVWT+N+M DN YGFDPHDDSDYL IA N VY N NHGIIASKRCNNV+IYD A++E+ DI+DN ++ ++GIR+ +GS++N +HDN F + G++TY GSDE +V GR DN F +N I T+ KIK+ D S TNN F EF ++ D VW+ N I CL D ++ FT S
Sbjct: 8 GGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDET---ATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQET--YKDGRSFIRCVSEV----LTGEDTCAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVG-GGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNNSTFTGSS 441
BLAST of mRNA_E-fasciculatus_F_contig1453.3274.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 337 bits (864), Expect = 6.410e-101 Identity = 203/445 (45.62%), Postives = 254/445 (57.08%), Query Frame = 3
Query: 225 GGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSATPTGYWLLTSSLEVLDGVTLYVHGTSDGGDADVLRIQSTKDVFWEIRAWGGNLSFKGTTVTSWDTDEGKERVLSDVNKGRSFINCVTQFDDSDIWSCSGRSNKEKGTCRMDIIDSTMGNMGYYDAESYGLTWKVRGLCTDLSNVEIMDDHNVYGDIINSEIYGMYYGMYSYGHQGGVWTDNIMRDNILYGFDPHDDSDYLTIARNTVYGNGNHGIIASKRCNNVEIYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALMESFNADIYDNTIENCKYGIRLSVGSADNDIHDNTFDSSSTYGLYTYEGSDETYVSDNGRVKDNSFDSNVISNTDVATKIKQGDGNSFTNNKFESVKTFEFEDSTDTVWTNND--------IGDG-CLDESTDFTSGSIPSC 1526
GGC TL D++ G PLY + S+ V S++ TG WLLT SL V DG+TL VHG S GG AD LR+ ST F +RA GG+L F T V +WDT K +V +D +KGRS+I+ V++ C GR+ K G RMDI DS M +GY+ +ESYGLTWKVRGLC DLSN+E+ D NVYG+I +S+I+ Y+G+Y+YGH+ G W N M N YGFDPHDDSD+LTI N VY NGNHGIIASKRCN XXXXX ALME+FNAD+ +N E+ KYGIR+SVG ADN N SS Y +YTY+GSD +V D+GR +D S K+ DG F +N F+S KT FED T+ + N + DG C D+ +D S P C
Sbjct: 64 GGCVTLEDIWRDLDGGAPLYAVKPSSGDV-----SSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTS--KNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSD--SAYKPVC 499
BLAST of mRNA_E-fasciculatus_F_contig1453.3274.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 334 bits (857), Expect = 6.500e-100 Identity = 206/416 (49.52%), Postives = 254/416 (61.06%), Query Frame = 3
Query: 225 GGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSATPTGYWLLTSSLEVLDGVTLYVHGTSDGGDADVLRIQSTKDVFWEIRAWGGNLSFKGTTVTSWDTD-EGKERVLSDVNKGRSFINCVTQFDDSDIWSCSGRSNKEKGTCRMDIIDSTMGNMGYYDAESYGLTWKVRGLCTDLSNVEIMDDHNVYGDIINSEIYGMYYGMYSYGHQGGVWTDNIMRDNILYGFDPHDDSDYLTIARNTVYGNGNHGIIASKRCNNVEIY--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFNADIYDNTIENCKYGIRLSVGSADNDIHDNTFDSSSTYGLYTYEGSDETYVSDNGRVKDNSFDSNVISNTDVATKIKQGDGNSFTNNKFESVKTFEFEDSTDTVWTNN 1463
GGC TL ++ Q G PLY +DS + + S + TG WLLT L V DG+TL VHGTS GGDAD LR+ ST D F +RA GG+L F T V +WDT G +R D GRS+++ V++ D +C+GR+ G RMDI DS MG +GY+ +ESYGLTWKVRG C D SN ++ +D NVYG+I +S+I+ +G+Y+YGHQ G W N M DN YGFDPHDDSD+LTI N VY NG HGIIASKRCN V I + XXXXXXXXXXXXXXXX A+MESFNAD+ DN EN KYGIR SVGS N +N S+ Y Y+Y GSD V D+GR +DN F N I + K+ DG F +N FE T F D+ T+ + N
Sbjct: 64 GGCVTLEQIWEHQRGEAPLYAVDSKSGDI-----SDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDR---DEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGN 471
BLAST of mRNA_E-fasciculatus_F_contig1453.3274.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 335 bits (859), Expect = 6.820e-100 Identity = 195/429 (45.45%), Postives = 249/429 (58.04%), Query Frame = 3
Query: 222 GGGCATLTDMYNTQ-----SGSGPLYVLDSSNNIVSGGGGSATPTGYWLLTSSLEVLDGVTLYVHGTSDGGDADVLRIQSTKDV-FWEIRAWGGNLSFKGTTVTSWDTDEGKERVLSDVNKGRSFINCVTQFDDSDIWSCSGRSNKEKGTCRMDIIDSTMGNMGYYDAESYGLTWKVRGLCTDLSNVEIMDDHNVYGDIINSEIYGMYYGMYSYGHQGGVWTDNIMRDNILYGFDPHDDSDYLTIARNTVYGNGNHGIIASKRCNNVEIY--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFNADIYDNTIENCKYGIRLSVGSADNDIHDNTFDSSSTYGLYTYEGSDETY--VSDNGRVKDNSFDSNVISNTDVATKIKQGDGNSFTNNKFESVKTFEFEDSTDTVWTNNDIGDG 1478
G GC T+TD+YN + S GP++ LD S N V + WLLT+ L + G Y G+S GGD D LRIQST F E+RA GG++ F+ T VTSWDT + GRSF+NCV++ ++ C G++ E G CRMDII+S +G +GY+D+ESYGLTWKVRG C DLSN ++ D NVYG++I S+I+ YYG YSYGHQGGVW +N M DN YGFDPHDDSDYLT IIASKRCNNV+IY + A++ES NADIY+N + K+GIRLS+GS++N +H+N F+ ST GLYTY+GSDE VSD GR DN F++N I N KIK+GD T+N F EF D+ +T W N + G
Sbjct: 84 GEGCFTITDLYNFRLESDGSAKGPIFNLDDSYNTVLN---PKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQAT--YVGGRSFLNCVSEKLTGEV--CVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSD-GRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG 492
BLAST of mRNA_E-fasciculatus_F_contig1453.3274.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 333 bits (855), Expect = 1.850e-99 Identity = 196/451 (43.46%), Postives = 254/451 (56.32%), Query Frame = 3
Query: 225 GGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSATPTGYWLLTSSLEVLDGVTLYVHGTSDGGDADVLRIQSTKDVFWEIRAWGGNLSFKGTTVTSWDTDEGKERVLSDVNKGRSFINCVTQFDDSDIWSCSGRSNKEKGTCRMDIIDSTMGNMGYYDAESYGLTWKVRGLCTDLSNVEIMDDHNVYGDIINSEIYGMYYGMYSYGHQGGVWTDNIMRDNILYGFDPHDDSDYLTIARNTVYGNGNHGIIASKRCNNVEIY--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFNADIYDNTIENCKYGIRLSVGSADNDIHDNTFDSSSTYGLYTYEGSDETYVSDNGRVKDNSFDSNVISNTDVATKIKQGDGNSFTNNKFE----SVKTFEFEDSTDTVWTNN---DIGD--------GCLDESTDFTSGSIPSC 1526
GGCATL ++ +++G PLY +D + V S T TG WLLT L V DG+TL V+GT +GGDAD LR+ ST + + +RA GG+L F GT V SWDT D GRS+I+ V++ + +C G + G RMDI +S +G +G+ D+ESYGLTWKVRG C D SN EI DD NVYG++ +S+I+ + +G+Y+YGHQ G W N M DN YGFDPHDDSD+LTI N VY NG HGIIASKRCN V I + A++ESFNAD+ +NT EN KYG+R+SVG ADN +N ++S Y YTY GSDE V +GR ++N F N S + KIK+ DG F +N FE F+D+ ++V N D GD C D +D SG P C
Sbjct: 71 GGCATLGQIWESRAGKAPLYAVDPDSGDV-----SETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPD--EDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESD--SGYEPVC 512 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1453.3274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1453.3274.1 >prot_E-fasciculatus_F_contig1453.3274.1 ID=prot_E-fasciculatus_F_contig1453.3274.1|Name=mRNA_E-fasciculatus_F_contig1453.3274.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=493bp MCSATNGAAPCIVDGDSTGPTPTPPSPSPPTPSPPSPSTCSGTIASISTSback to top mRNA from alignment at E-fasciculatus_F_contig1453:8373..17924- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1453.3274.1 ID=mRNA_E-fasciculatus_F_contig1453.3274.1|Name=mRNA_E-fasciculatus_F_contig1453.3274.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9552bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1453:8373..17924- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1453:8373..17924- >mRNA_E-fasciculatus_F_contig1453.3274.1 ID=mRNA_E-fasciculatus_F_contig1453.3274.1|Name=mRNA_E-fasciculatus_F_contig1453.3274.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2958bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1453:8373..17924- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |