mRNA_E-fasciculatus_F_contig14513.3262.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14513.3262.1
Unique NamemRNA_E-fasciculatus_F_contig14513.3262.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14513.3262.1 vs. uniprot
Match: D8LE09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE09_ECTSI)

HSP 1 Score: 599 bits (1545), Expect = 3.070e-206
Identity = 399/574 (69.51%), Postives = 416/574 (72.47%), Query Frame = 1 
Query:  223 ARAPSLPAESSS-ITGALQRYVSADQMPSAAAA-----DGDLSPAEALPTRSVFIATAVLVGKRNQQRHRQHEQQREERTLPNRRGKDGEEGGVSRSSSGRGG------ASRTPSPSLTRRVWASASPRFGSGGGSCVGGDGCXXXXXXXXIRRLSSGSYGSNSGI-----RERSDPVAIWRSDSRDDGDKGRNNIAPATTVAAASPEQKKDKTTTPTVTTVSPTARFYDYWRYCNFRPASMVRAATKDMANDILSTGGEDDEKITVPAPLDPVTSARAARQTPATKRSRGPPAGKDRGLACGESGGXXXXXXXXXXXXXXXXXXXXXXXXKGRAEAGAKARTAIAAAAVAERRTEDVKLRLGELRSRPENRQGVRSNYSTAFGRVVRCADCGAPCADWASVAHGSFVCLKCAGQHRSLGMHVVFTRSLVMDKWTDESLRLMEAGGNKRLAEFSRRVGLYPWSTVEEKRGHPCLPLYRKRLAALADGEKPPPISREALEQARFFFFYKGAVLEASGEKEASDDDGSDNEKGSSEGPAGGG--------DPLKDLFKSVTGGCDGVGQVFRRHFC 1869
            ARAPSLPAESSS ITGAL+RY SADQMPS A       DGDLSPAEALPTRSVFIATAVLVGKRN+QRH QH+QQREERT PN RGK+ EEGGVSRS            ASRTPSPSLTRRVWASASPRFG+GGG        XXXXXXXX                    RE  DPVA+WRS SRDDG KG  ++APAT  AAAS EQK     TP  TTVSP ARFYDYWR+CNFRPAS VR+ATKDMA+DILST GED  +ITVPAPLDPVT ARAA +T ATKRSRGPPAG+D  L  G   G           XXXXXXXXXXXXX   AEAGAKARTA AAAAVAERRTED KLRLGELR RP+N                RCADCGAPCADWASVAHGSFVCLKCAGQ RSLGMHV+FTRSLVMDKWTDESLRLMEAGGNKRLAEFSRR+GLYPWSTVEEK  HPCLPLYRKRLAALADGEKPPPISREALEQA         VLEASGE EASDD                         DPLK LFKSVTGGCDGVGQ FRRHFC
Sbjct:    2 ARAPSLPAESSSSITGALRRYFSADQMPSDAXXXXXXXDGDLSPAEALPTRSVFIATAVLVGKRNKQRHLQHQQQREERTSPNWRGKE-EEGGVSRSXXXXXXXXXXXXASRTPSPSLTRRVWASASPRFGTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGREGVDPVALWRSYSRDDGVKG-GSVAPAT-AAAASAEQKAK---TP-ATTVSPIARFYDYWRHCNFRPASAVRSATKDMADDILSTAGEDKGRITVPAPLDPVTPARAAPRTLATKRSRGPPAGQDGELVAGGGNGRAGNIESESAAXXXXXXXXXXXXX---AEAGAKARTAFAAAAVAERRTEDAKLRLGELRLRPDN---------------SRCADCGAPCADWASVAHGSFVCLKCAGQQRSLGMHVIFTRSLVMDKWTDESLRLMEAGGNKRLAEFSRRMGLYPWSTVEEKYRHPCLPLYRKRLAALADGEKPPPISREALEQA---------VLEASGEGEASDDGXXXXXXXXXXXXXXXXXXXXXXAHDPLKLLFKSVTGGCDGVGQAFRRHFC 541
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BLAST of mRNA_E-fasciculatus_F_contig14513.3262.1 vs. uniprot
Match: A0A6H5K7B0_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B0_9PHAE)

HSP 1 Score: 415 bits (1066), Expect = 2.660e-135
Identity = 344/518 (66.41%), Postives = 364/518 (70.27%), Query Frame = 1 
Query:    1 GAGPQLP-GATRKSASCDWYNARREAPLSPSTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRRARAPSLPAESSS-ITGALQRYVSADQMPSAAAA---DGDLSPAEALPTRSVFIATAVLVGKRNQQRHRQHEQQREER--TLPNRRGKDGEEGGVSRSSSGRGG----ASRTPSPSLTRRVWASASPRFGSGGGSCVGGDGCXXXXXXXXIRRLSSGSYGSNSGIRERSDPVAIWRSDSRDDGDKGRNNIAPATTVAAASPEQKKDKTTTPTVTTVSPTARFYDYWRYCNFRPASMVRAATKDMANDILSTGGEDDEKITVPAPLDPVTSARAARQTPATKRSRGPPAGKDRGLACGESGGXXXXXXXXXXXXXXXXXXXXXXXXKGRAEAGAKARTAIAAAAVAERRTEDVKLRLGELRSRPENRQG-VRSNYSTAF--------------GRVVRCADCGAPCADWASVAHGSFVCLKCAGQHRSLGMHVVFTRSLVMDKWT 1476
            G G QLP GATR+S SC  +N +REA  SPSTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     HR ARAPSLPAESSS ITGA        QMPSAAAA   DGDLSPAEALPTRSVFIATAVLVGKRNQ               T PN RGK+ EEGGVSR           ASRTPSPSLTRRVWAS S RFGS G SC GG+  XXXXXXXX             G+RE +DPVA+WRS  RDD  KG  +IA AT  A AS EQK         TTVSPTARFYDYWR+CNFR AS VR+ATK+MA+DILST GED+EKI VPAPLDPVTSARAA   PATKRSRG PAG+D  L    +GG              XXXXXXXXXX   AEAGAKARTA AAAAVAERRTED KLRLGELRSRP+NRQ   RS+  TA                 + RCADCGAPCADWASVAHGSFVCLKCAGQHRSLGM V+FTRSLVMDKWT
Sbjct:   35 GGGSQLPRGATRRSVSCAGHNVKREARRSPSTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL----HRTARAPSLPAESSSSITGA--------QMPSAAAANDDDGDLSPAEALPTRSVFIATAVLVGKRNQXXXXXXXXXXXXXXXTSPNWRGKE-EEGGVSRXXXXXXXXXXXASRTPSPSLTRRVWASTSSRFGSSG-SCGGGEDXXXXXXXXXXXXXXXXXXXXXGGVREGADPVALWRSYGRDDDVKG-GSIARAT-AAEASAEQKAKAP----ATTVSPTARFYDYWRHCNFRAASTVRSATKNMADDILSTAGEDNEKIAVPAPLDPVTSARAAPLIPATKRSRGLPAGQDGELV---AGGGNDGAGNVESESAAXXXXXXXXXXXXXAEAGAKARTAFAAAAVAERRTEDAKLRLGELRSRPDNRQEEARSDCFTALVAPCAWEGAEGGGASGIFRCADCGAPCADWASVAHGSFVCLKCAGQHRSLGMQVIFTRSLVMDKWT 529
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BLAST of mRNA_E-fasciculatus_F_contig14513.3262.1 vs. uniprot
Match: A0A6H5K0I1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I1_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 6.040e-27
Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 1 
Query: 1495 MEAGGNKRLAEFSRRVGLYPWSTVEEKRGHPCLPLYRKRLAALADGEKPPPISREALEQAR 1677
            MEAGGNKRLAEFSRRVG+Y WST+EEK  HPCLPLYR+RLAALA GEKPPPISREALEQAR
Sbjct:    1 MEAGGNKRLAEFSRRVGVYRWSTMEEKYRHPCLPLYRRRLAALAHGEKPPPISREALEQAR 61
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BLAST of mRNA_E-fasciculatus_F_contig14513.3262.1 vs. uniprot
Match: A0A4D9D8B9_9STRA (Arf-GAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8B9_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.170e-22
Identity = 49/103 (47.57%), Postives = 72/103 (69.90%), Query Frame = 1 
Query: 1336 CADCGAPCADWASVAHGSFVCLKCAGQHRSLGMHVVFTRSLVMDKWTDESLRLMEAGGNKRLAEFSRRVGLYPWSTVEEKRGHPCLPLYRKRLAALADGEKPP 1644
            CADC AP   WASV++GSF+CL C+GQHR+LG+H+ F RS+ MD WTD+ +RLME GGN ++  F ++ G+     +++K       LYR+R+ A+ +G +PP
Sbjct:   22 CADCPAPNPQWASVSYGSFICLDCSGQHRALGVHLSFVRSITMDSWTDKQIRLMEKGGNDQVISFFQQRGIAKSVPIQQKYKTAEAELYRERIKAVVEGREPP 124
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BLAST of mRNA_E-fasciculatus_F_contig14513.3262.1 vs. uniprot
Match: D8LVQ4_BLAHO (Arf-GAP domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LVQ4_BLAHO)

HSP 1 Score: 107 bits (266), Expect = 6.610e-21
Identity = 47/103 (45.63%), Postives = 71/103 (68.93%), Query Frame = 1 
Query: 1336 CADCGAPCADWASVAHGSFVCLKCAGQHRSLGMHVVFTRSLVMDKWTDESLRLMEAGGNKRLAEFSRRVGLYPWSTVEEKRGHPCLPLYRKRLAALADGEKPP 1644
            CADCGA    WASV++G FVCL+C+GQHR LG+H+ F RS+ MD WT+  ++ M+ GGNK++ +F +  G+   S++++K       LYR+ +AA  +G +PP
Sbjct:   18 CADCGAARPQWASVSYGIFVCLECSGQHRGLGVHLSFVRSVQMDSWTEREIKAMQVGGNKQMNDFLQEHGVPKNSSIKKKYNSRAAALYREVIAAKIEGREPP 120
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BLAST of mRNA_E-fasciculatus_F_contig14513.3262.1 vs. uniprot
Match: A0A0G4IZH8_PLABS (Arf-GAP domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IZH8_PLABS)

HSP 1 Score: 103 bits (258), Expect = 1.600e-20
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 1 
Query: 1336 CADCGAPCADWASVAHGSFVCLKCAGQHRSLGMHVVFTRSLVMDKWTDESLRLMEAGGNKRLAEFSRRVGLYPWSTVEEKRGHPCLPLYRKRLAALADGEKPPP 1647
            C DC  P   WASV+HG+F+C+ C+G HRSLG+H+ F RS+ MD W+++ + ++  GGN+R+  F +     P  +  EK G      YR RL ALADG  P P
Sbjct:   21 CVDCDRPNPQWASVSHGTFICIDCSGVHRSLGVHISFVRSVTMDSWSEKQINMLRHGGNERMRRFFQMQKFPPNLSQAEKYGSTAAGAYRDRLKALADGRDPGP 124
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BLAST of mRNA_E-fasciculatus_F_contig14513.3262.1 vs. uniprot
Match: A0A196SD12_BLAHN (ADP-ribosylation factor GTPase-activating protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SD12_BLAHN)

HSP 1 Score: 103 bits (258), Expect = 2.490e-20
Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 1 
Query: 1333 RCADCGAPCADWASVAHGSFVCLKCAGQHRSLGMHVVFTRSLVMDKWTDESLRLMEAGGNKRLAEFSRRVGLYPWSTVEEKRGHPCLPLYRKRLAALADGEKPPPISREALEQARFFFFYKGAVLEASGEKEAS 1734
            RCADCGA   +WASV +GS +C+KCAG HR LG+H+ + RSL MD W +  +++M+AGGN+RL +F +R  +   + +  K       LYR  L A+ +G + P     + ++       KG VL+    KE+S
Sbjct:   20 RCADCGAENPEWASVTYGSLICVKCAGLHRGLGVHISYVRSLEMDSWEESEIKMMKAGGNQRLLDFFKRHNIERDAPISLKYNTKTAELYRTILKAIVEGTEVPEDQALSEDETN-----KGLVLQRRESKESS 148
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BLAST of mRNA_E-fasciculatus_F_contig14513.3262.1 vs. uniprot
Match: A0A1U7LLV3_NEOID (Arf-GAP domain-containing protein n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LLV3_NEOID)

HSP 1 Score: 102 bits (255), Expect = 2.700e-20
Identity = 49/113 (43.36%), Postives = 73/113 (64.60%), Query Frame = 1 
Query: 1333 RCADCGAPCADWASVAHGSFVCLKCAGQHRSLGMHVVFTRSLVMDKWTDESLRLMEAGGNKRLAEFSRRVGLYPWS-TVEEKRGHPCLPLYRKRLAALADGEKPPPISREALE 1668
            +CADCGAP   WAS+++G F+CL+C+GQHRSLG H+ F RS+ MD W+D  ++ ME GGN ++ EF  +   Y  S ++++K        YR++L A A+G     I+R+  E
Sbjct:   18 KCADCGAPAPQWASISYGIFICLECSGQHRSLGTHISFVRSVTMDTWSDAQVKKMEIGGNAKVLEFFEQSPEYLSSMSIKDKYSSDFAEDYREKLEAEAEGRSWTKIARKPKE 130
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14513.3262.1 vs. uniprot
Match: A0A7S2V5A2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A2_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.100e-19
Identity = 47/103 (45.63%), Postives = 66/103 (64.08%), Query Frame = 1 
Query: 1336 CADCGAPCADWASVAHGSFVCLKCAGQHRSLGMHVVFTRSLVMDKWTDESLRLMEAGGNKRLAEFSRRVGLYPWSTVEEKRGHPCLPLYRKRLAALADGEKPP 1644
            C DC AP   WASV +GSF+CL C+GQHRSLG+H+ F RS+ MD W+D+ +R+M+ GGN +L ++ R+  +   + V  K   P   LY+ RL A  +G   P
Sbjct:   22 CVDCKAPHPQWASVTYGSFICLDCSGQHRSLGVHMSFVRSVTMDSWSDKQIRMMQCGGNDKLRDWFRQHNIDSLALVP-KYHEPAAELYKDRLLAEVEGRPLP 123
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BLAST of mRNA_E-fasciculatus_F_contig14513.3262.1 vs. uniprot
Match: A0A835Z255_9STRA (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z255_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.320e-19
Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 1 
Query: 1336 CADCGAPCADWASVAHGSFVCLKCAGQHRSLGMHVVFTRSLVMDKWTDESLRLMEAGGNKRLAEFSRRVGLYPWSTVEEKRGHPCLPLYRKRLAALADGEKPP 1644
            C DCG P   WASV++G   CL+C+GQHR LG+HV F RS+ MD WTD+ +++M  GGN +L E+  + G+     +  K   P   L+++RL A  +G   P
Sbjct:   18 CVDCGVPHPQWASVSYGCLFCLECSGQHRGLGVHVSFVRSITMDSWTDKQIKMMREGGNAKLLEWFDQRGIGRADPINTKYNSPEAELFKERLLAAVEGRPLP 120
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14513.3262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE09_ECTSI3.070e-20669.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7B0_9PHAE2.660e-13566.41Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5K0I1_9PHAE6.040e-2788.52Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A4D9D8B9_9STRA2.170e-2247.57Arf-GAP domain-containing protein n=2 Tax=Monodops... [more]
D8LVQ4_BLAHO6.610e-2145.63Arf-GAP domain-containing protein n=1 Tax=Blastocy... [more]
A0A0G4IZH8_PLABS1.600e-2044.23Arf-GAP domain-containing protein n=1 Tax=Plasmodi... [more]
A0A196SD12_BLAHN2.490e-2039.55ADP-ribosylation factor GTPase-activating protein ... [more]
A0A1U7LLV3_NEOID2.700e-2043.36Arf-GAP domain-containing protein n=1 Tax=Neolecta... [more]
A0A7S2V5A2_9STRA3.100e-1945.63Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835Z255_9STRA4.320e-1942.72Arf-GAP domain-containing protein (Fragment) n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14513contigE-fasciculatus_F_contig14513:2..3304 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score609.8
Seed ortholog evalue1.5e-171
Seed eggNOG ortholog2880.D8LE09
EggNOG free text desc.GTPase activator activity
EggNOG OGsCOG5347@1,KOG0704@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1871
Cds size1869
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14513.3262.1prot_E-fasciculatus_F_contig14513.3262.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14513 2..3302 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927936.637098-CDS-E-fasciculatus_F_contig14513:1..13321622927936.637098-CDS-E-fasciculatus_F_contig14513:1..1332Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14513 2..1332 +
1695995758.2314115-CDS-E-fasciculatus_F_contig14513:1..13321695995758.2314115-CDS-E-fasciculatus_F_contig14513:1..1332Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14513 2..1332 +
1622927936.6485822-CDS-E-fasciculatus_F_contig14513:1567..17131622927936.6485822-CDS-E-fasciculatus_F_contig14513:1567..1713Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14513 1568..1713 +
1695995758.2433672-CDS-E-fasciculatus_F_contig14513:1567..17131695995758.2433672-CDS-E-fasciculatus_F_contig14513:1567..1713Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14513 1568..1713 +
1622927936.6611636-CDS-E-fasciculatus_F_contig14513:2042..22631622927936.6611636-CDS-E-fasciculatus_F_contig14513:2042..2263Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14513 2043..2263 +
1695995758.2596915-CDS-E-fasciculatus_F_contig14513:2042..22631695995758.2596915-CDS-E-fasciculatus_F_contig14513:2042..2263Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14513 2043..2263 +
1622927936.675488-CDS-E-fasciculatus_F_contig14513:3131..33021622927936.675488-CDS-E-fasciculatus_F_contig14513:3131..3302Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14513 3132..3302 +
1695995758.2780042-CDS-E-fasciculatus_F_contig14513:3131..33021695995758.2780042-CDS-E-fasciculatus_F_contig14513:3131..3302Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14513 3132..3302 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14513.3262.1

>prot_E-fasciculatus_F_contig14513.3262.1 ID=prot_E-fasciculatus_F_contig14513.3262.1|Name=mRNA_E-fasciculatus_F_contig14513.3262.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=623bp
GAGPQLPGATRKSASCDWYNARREAPLSPSTKAAAAAAAAAPPPPPPAAA
AAAGGRSRSKSSSSSSPPPPPHRRARAPSLPAESSSITGALQRYVSADQM
PSAAAADGDLSPAEALPTRSVFIATAVLVGKRNQQRHRQHEQQREERTLP
NRRGKDGEEGGVSRSSSGRGGASRTPSPSLTRRVWASASPRFGSGGGSCV
GGDGCDGCVSCVSIRRLSSGSYGSNSGIRERSDPVAIWRSDSRDDGDKGR
NNIAPATTVAAASPEQKKDKTTTPTVTTVSPTARFYDYWRYCNFRPASMV
RAATKDMANDILSTGGEDDEKITVPAPLDPVTSARAARQTPATKRSRGPP
AGKDRGLACGESGGGGGGGGGVGNVENESAAAETREDRKGRAEAGAKART
AIAAAAVAERRTEDVKLRLGELRSRPENRQGVRSNYSTAFGRVVRCADCG
APCADWASVAHGSFVCLKCAGQHRSLGMHVVFTRSLVMDKWTDESLRLME
AGGNKRLAEFSRRVGLYPWSTVEEKRGHPCLPLYRKRLAALADGEKPPPI
SREALEQARFFFFYKGAVLEASGEKEASDDDGSDNEKGSSEGPAGGGDPL
KDLFKSVTGGCDGVGQVFRRHFC
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mRNA from alignment at E-fasciculatus_F_contig14513:2..3304+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14513.3262.1 ID=mRNA_E-fasciculatus_F_contig14513.3262.1|Name=mRNA_E-fasciculatus_F_contig14513.3262.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3303bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14513:2..3304+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCGCCGGCCCCCAGCTGCCTGGGGCCACCCGCAAGAGCGCTTCGTGCGA
CTGGTATAACGCGAGGCGAGAGGCACCGCTAAGCCCCTCCACCAAAGCGG
CGGCCGCGGCGGCGGCGGCGGCGCCGCCGCCGCCGCCGCCAGCAGCAGCA
GCAGCAGCAGGGGGAAGATCTCGGTCGAAGTCGTCGTCGTCGTCGTCGCC
GCCACCGCCGCCGCACCGAAGGGCACGAGCACCATCGCTGCCCGCCGAGT
CTTCCTCGATCACTGGGGCCTTGCAGCGATACGTCTCGGCCGACCAGATG
CCCAGCGCCGCCGCCGCCGATGGCGACCTGTCGCCGGCGGAGGCGCTGCC
CACGCGCTCCGTCTTCATCGCCACGGCGGTGCTAGTGGGGAAGCGGAACC
AGCAGCGGCACCGGCAGCACGAGCAGCAGCGGGAGGAGAGGACGTTGCCG
AATCGGCGCGGGAAGGACGGGGAGGAGGGCGGGGTTAGCCGGAGCAGCAG
CGGCCGCGGCGGTGCGAGCAGGACCCCCAGCCCTTCCTTGACGCGCCGGG
TGTGGGCGTCCGCCTCCCCGAGGTTTGGCAGCGGCGGCGGCAGTTGCGTA
GGCGGCGATGGCTGCGATGGTTGCGTTTCCTGCGTTAGCATTCGGAGGTT
GTCCAGCGGCAGCTACGGCAGCAACAGCGGCATAAGAGAGCGTTCGGACC
CTGTCGCTATCTGGCGGAGCGACAGCAGAGACGACGGCGACAAAGGGCGC
AACAACATTGCCCCAGCGACGACCGTCGCGGCGGCAAGCCCGGAGCAGAA
GAAGGACAAGACGACGACGCCCACAGTTACCACCGTGTCCCCCACCGCCA
GGTTCTACGACTACTGGCGCTACTGCAATTTCCGACCGGCCTCGATGGTC
AGAGCCGCGACGAAGGACATGGCCAACGACATCCTGTCGACCGGAGGCGA
AGACGACGAAAAGATCACCGTCCCCGCCCCGTTGGATCCGGTCACTTCCG
CACGAGCGGCACGGCAGACACCGGCCACGAAGAGGAGCAGGGGGCCGCCA
GCAGGCAAAGACAGGGGCCTGGCTTGCGGTGAGAGCGGCGGCGGCGGCGG
GGGCGGGGGAGGAGTAGGCAATGTTGAGAATGAGAGCGCGGCGGCAGAGA
CGAGGGAGGACCGGAAGGGCCGAGCAGAGGCGGGGGCGAAGGCCAGGACG
GCTATTGCCGCCGCGGCGGTCGCGGAGCGACGGACGGAGGACGTGAAGCT
TAGGCTTGGGGAGCTGAGGTCGCGTCCGGAAAACAGGCAAGGCGTGCGCT
CGAACTACTCTACTGCTTTTGGTCGCGTCGTGTGCCCGGGAGGGCGCGGA
GTGGAGGGTGTCCGGCATCTTGTGTTTGTCAAGTCGGTTCCTCTGACCAA
CGACGTTAAATAACCGGGGACCGCCAACATCTTCCTTGTTTTCGTGTGAT
ATGCTTCCCCTCACGTGCGCGCCGCGCGCACGCCGCGCCCCCTATTTTTA
ACCTCGGTTCCGCCTTTCGATCTGTTTTTTTTTCGTCATCTGTTTCTTTT
TTTTTTTTGCGTGCAGCCGCTGCGCGGACTGCGGAGCGCCTTGCGCCGAC
TGGGCTTCCGTCGCGCACGGCTCTTTCGTGTGCCTCAAGTGCGCCGGGCA
GCACCGCAGTCTCGGGATGCACGTGGTCTTCACGCGGTCTCTCGTCATGG
ACAAGTGGACGGGTGAGTGTTGAGGGGTGCGATAGCTCTGTTTTTTTCAA
AAACTCATCTCTTGATTGGTTGGGGGTCCAGATGTGTTGCCGACGTTTCG
GTTGTGGCTCGCGCGCCCGCGGTTTTTTCTCGTGGTAATGATCGCGTGCC
TGCCCTGTCGGGGATGAGATCGTTGTGGTGGTCGCTGCTGCTGCTGCGTG
ACAGCCACGAAACTCCCACATCGCTTCTTCAGCTACCACACCAGCGTTCC
CGACGACTGGTGCGAGATTTTCACCCCCACCTTGCACCCCCCCCCCCCCC
CCCCATCCCGCTACGCCTTGCCCCCCGCCATCGCGACCCAGACGAAAGCC
TTCGCCTCATGGAGGCCGGCGGCAACAAGCGGCTGGCGGAGTTCTCGAGA
CGGGTGGGCCTCTACCCTTGGTCCACCGTGGAAGAAAAGCGTGGCCACCC
TTGCCTCCCGCTGTACCGGAAGCGCCTTGCCGCCCTGGCGGACGGGGAGA
AGCCGCCGCCGATCTCGAGGGAAGCCCTGGAACAGGCGAGATTTTTTTTT
TTTTATAAAGGGGTCGTGGAGGGAGATGGGAACAGCAGTAGTGTCACTGT
TTTATTCGTGGTGGAGGTAAGGGGAGAGGGGCGGGGCGGGTGTGTTGGCT
GACCGCAGAGGAAGGCATGGGGGACACGGGGGGTGAGGAGAGACACTGGT
TCATGTCGTCATTGTTGAAAGACACCGTGGTTATATATACACTCTCGGAA
TGCTTTTGGGTGGCCAAAAGGTTGGAAGGGAATGTTGTGAAATTTGATAC
GTCTGAAGGACGTTTTTTGGGCGAGGGTGTTCGTCGAGTACGCGAAAGTC
GACTCCGTTGTTCAACGAGGGACGGAGGGCTGCTGAACCTTCGTTGCTAC
TGTAGAACTGTTGAACGTACTGCATGCATGCCCTTATGAGGTGTGCCGAG
GAGTTATTCGTGGTTGCGACCTACCCCAGGCCGTAGTTCCAAAGAGGAGG
AGGCAAGACCGACTAGCGGTAGGCACACGAGGGAAGGTATAAATTGATGG
TATGGTTGATGACAAGAACGGGCGAGATAAAGTGACAGCAATGAACCCGT
CCGTCTGTCTGTCGGAATGAATAGAAAGCAAGGTCCGGTGTGGTCGTCCC
ACCAGGAGAAAAAAACATAGGACCCGTGCTTTCTCGTGACCAATATATTG
TAGCCCTCGCTTGCAGAAAAAAAGTCCCGGCCCGACAGGAAGAAGGGTAA
AACACCCCCACAGACCTGACGTTGGTGTTGTATCTGCTACTGATTATCTG
AGATACGCCGCTCACCACGATGCCTCACGTACGCCGCGCATGAAGCCACT
CCTCTTCCTTCTCCTCCTTGGCACCCTTTGCAACTTCTCATCGCCCCCCC
ACAACAATTACAATATTCTTTGGAAAACAGGCTGTACTGGAGGCGAGCGG
GGAAAAAGAGGCCTCGGACGACGACGGCAGCGACAACGAGAAAGGAAGCA
GCGAAGGTCCCGCCGGCGGAGGCGACCCTCTGAAGGACCTCTTCAAGAGC
GTTACCGGCGGGTGCGACGGGGTCGGCCAAGTCTTTCGACGGCACTTCTG
CCA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14513:2..3304+

>mRNA_E-fasciculatus_F_contig14513.3262.1 ID=mRNA_E-fasciculatus_F_contig14513.3262.1|Name=mRNA_E-fasciculatus_F_contig14513.3262.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3738bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14513:2..3304+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCGCCGGCCCCCAGCTGCCTGGGGCCACCCGCAAGAGCGCTTCGTGCGA
CTGGTATAACGCGAGGCGAGAGGCACCGCTAAGCCCCTCCACCAAAGCGG
CGGCCGCGGCGGCGGCGGCGGCGCCGCCGCCGCCGCCGCCAGCAGCAGCA
GCAGCAGCAGGGGGAAGATCTCGGTCGAAGTCGTCGTCGTCGTCGTCGCC
GCCACCGCCGCCGCACCGAAGGGCACGAGCACCATCGCTGCCCGCCGAGT
CTTCCTCGATCACTGGGGCCTTGCAGCGATACGTCTCGGCCGACCAGATG
CCCAGCGCCGCCGCCGCCGATGGCGACCTGTCGCCGGCGGAGGCGCTGCC
CACGCGCTCCGTCTTCATCGCCACGGCGGTGCTAGTGGGGAAGCGGAACC
AGCAGCGGCACCGGCAGCACGAGCAGCAGCGGGAGGAGAGGACGTTGCCG
AATCGGCGCGGGAAGGACGGGGAGGAGGGCGGGGTTAGCCGGAGCAGCAG
CGGCCGCGGCGGTGCGAGCAGGACCCCCAGCCCTTCCTTGACGCGCCGGG
TGTGGGCGTCCGCCTCCCCGAGGTTTGGCAGCGGCGGCGGCAGTTGCGTA
GGCGGCGATGGCTGCGATGGTTGCGTTTCCTGCGTTAGCATTCGGAGGTT
GTCCAGCGGCAGCTACGGCAGCAACAGCGGCATAAGAGAGCGTTCGGACC
CTGTCGCTATCTGGCGGAGCGACAGCAGAGACGACGGCGACAAAGGGCGC
AACAACATTGCCCCAGCGACGACCGTCGCGGCGGCAAGCCCGGAGCAGAA
GAAGGACAAGACGACGACGCCCACAGTTACCACCGTGTCCCCCACCGCCA
GGTTCTACGACTACTGGCGCTACTGCAATTTCCGACCGGCCTCGATGGTC
AGAGCCGCGACGAAGGACATGGCCAACGACATCCTGTCGACCGGAGGCGA
AGACGACGAAAAGATCACCGTCCCCGCCCCGTTGGATCCGGTCACTTCCG
CACGAGCGGCACGGCAGACACCGGCCACGAAGAGGAGCAGGGGGCCGCCA
GCAGGCAAAGACAGGGGCCTGGCTTGCGGTGAGAGCGGCGGCGGCGGCGG
GGGCGGGGGAGGAGTAGGCAATGTTGAGAATGAGAGCGCGGCGGCAGAGA
CGAGGGAGGACCGGAAGGGCCGAGCAGAGGCGGGGGCGAAGGCCAGGACG
GCTATTGCCGCCGCGGCGGTCGCGGAGCGACGGACGGAGGACGTGAAGCT
TAGGCTTGGGGAGCTGAGGTCGCGTCCGGAAAACAGGCAAGGCGTGCGCT
CGAACTACTCTACTGCTTTTGGTCGCGTCGTGGCGCCGGCCCCCAGCTGC
CTGGGGCCACCCGCAAGAGCGCTTCGTGCGACTGGTATAACGCGAGGCGA
GAGGCACCGCTAAGCCCCTCCACCAAAGCGGCGGCCGCGGCGGCGGCGGC
GGCGCCGCCGCCGCCGCCGCCAGCAGCAGCAGCAGCAGCAGGGGGAAGAT
CTCGGTCGAAGTCGTCGTCGTCGTCGTCGCCGCCACCGCCGCCGCACCGA
AGGGCACGAGCACCATCGCTGCCCGCCGAGTCTTCCTCGATCACTGGGGC
CTTGCAGCGATACGTCTCGGCCGACCAGATGCCCAGCGCCGCCGCCGCCG
ATGGCGACCTGTCGCCGGCGGAGGCGCTGCCCACGCGCTCCGTCTTCATC
GCCACGGCGGTGCTAGTGGGGAAGCGGAACCAGCAGCGGCACCGGCAGCA
CGAGCAGCAGCGGGAGGAGAGGACGTTGCCGAATCGGCGCGGGAAGGACG
GGGAGGAGGGCGGGGTTAGCCGGAGCAGCAGCGGCCGCGGCGGTGCGAGC
AGGACCCCCAGCCCTTCCTTGACGCGCCGGGTGTGGGCGTCCGCCTCCCC
GAGGTTTGGCAGCGGCGGCGGCAGTTGCGTAGGCGGCGATGGCTGCGATG
GTTGCGTTTCCTGCGTTAGCATTCGGAGGTTGTCCAGCGGCAGCTACGGC
AGCAACAGCGGCATAAGAGAGCGTTCGGACCCTGTCGCTATCTGGCGGAG
CGACAGCAGAGACGACGGCGACAAAGGGCGCAACAACATTGCCCCAGCGA
CGACCGTCGCGGCGGCAAGCCCGGAGCAGAAGAAGGACAAGACGACGACG
CCCACAGTTACCACCGTGTCCCCCACCGCCAGGTTCTACGACTACTGGCG
CTACTGCAATTTCCGACCGGCCTCGATGGTCAGAGCCGCGACGAAGGACA
TGGCCAACGACATCCTGTCGACCGGAGGCGAAGACGACGAAAAGATCACC
GTCCCCGCCCCGTTGGATCCGGTCACTTCCGCACGAGCGGCACGGCAGAC
ACCGGCCACGAAGAGGAGCAGGGGGCCGCCAGCAGGCAAAGACAGGGGCC
TGGCTTGCGGTGAGAGCGGCGGCGGCGGCGGGGGCGGGGGAGGAGTAGGC
AATGTTGAGAATGAGAGCGCGGCGGCAGAGACGAGGGAGGACCGGAAGGG
CCGAGCAGAGGCGGGGGCGAAGGCCAGGACGGCTATTGCCGCCGCGGCGG
TCGCGGAGCGACGGACGGAGGACGTGAAGCTTAGGCTTGGGGAGCTGAGG
TCGCGTCCGGAAAACAGGCAAGGCGTGCGCTCGAACTACTCTACTGCTTT
TGGTCGCGTCGTCCGCTGCGCGGACTGCGGAGCGCCTTGCGCCGACTGGG
CTTCCGTCGCGCACGGCTCTTTCGTGTGCCTCAAGTGCGCCGGGCAGCAC
CGCAGTCTCGGGATGCACGTGGTCTTCACGCGGTCTCTCGTCATGGACAA
GTGGACGGCCGCTGCGCGGACTGCGGAGCGCCTTGCGCCGACTGGGCTTC
CGTCGCGCACGGCTCTTTCGTGTGCCTCAAGTGCGCCGGGCAGCACCGCA
GTCTCGGGATGCACGTGGTCTTCACGCGGTCTCTCGTCATGGACAAGTGG
ACGGACGAAAGCCTTCGCCTCATGGAGGCCGGCGGCAACAAGCGGCTGGC
GGAGTTCTCGAGACGGGTGGGCCTCTACCCTTGGTCCACCGTGGAAGAAA
AGCGTGGCCACCCTTGCCTCCCGCTGTACCGGAAGCGCCTTGCCGCCCTG
GCGGACGGGGAGAAGCCGCCGCCGATCTCGAGGGAAGCCCTGGAACAGGC
GAGATTTTTTTTTTTTTATAAAGGGACGAAAGCCTTCGCCTCATGGAGGC
CGGCGGCAACAAGCGGCTGGCGGAGTTCTCGAGACGGGTGGGCCTCTACC
CTTGGTCCACCGTGGAAGAAAAGCGTGGCCACCCTTGCCTCCCGCTGTAC
CGGAAGCGCCTTGCCGCCCTGGCGGACGGGGAGAAGCCGCCGCCGATCTC
GAGGGAAGCCCTGGAACAGGCGAGATTTTTTTTTTTTTATAAAGGGGCTG
TACTGGAGGCGAGCGGGGAAAAAGAGGCCTCGGACGACGACGGCAGCGAC
AACGAGAAAGGAAGCAGCGAAGGTCCCGCCGGCGGAGGCGACCCTCTGAA
GGACCTCTTCAAGAGCGTTACCGGCGGGTGCGACGGGGTCGGCCAAGTCT
TTCGACGGCACTTCTGCGCTGTACTGGAGGCGAGCGGGGAAAAAGAGGCC
TCGGACGACGACGGCAGCGACAACGAGAAAGGAAGCAGCGAAGGTCCCGC
CGGCGGAGGCGACCCTCTGAAGGACCTCTTCAAGAGCGTTACCGGCGGGT
GCGACGGGGTCGGCCAAGTCTTTCGACGGCACTTCTGC
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