prot_E-fasciculatus_F_contig14481.3243.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14481.3243.1
Unique Nameprot_E-fasciculatus_F_contig14481.3243.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length207
Homology
BLAST of mRNA_E-fasciculatus_F_contig14481.3243.1 vs. uniprot
Match: D8LQU8_ECTSI (Tryptophan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQU8_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 4.690e-127
Identity = 189/207 (91.30%), Postives = 195/207 (94.20%), Query Frame = 0
Query:    1 MATDLDAAEVGEQGLATLQPVPPVPVRRGVNPRLAKVFRRQDGEPQEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFSDPQADGPTIQATNQVALQNNVTLTECLDIVRDARAKGLTIAVVLMGYLNPFLAYGLNKLVHDAHRNGVDGFLVVDLLPDDAHDFISKCHEYHLSFVPLVTPATTDDRIPFIASATDSFVYC 207
            MA+DL+AA VGEQGL TL PVPP PV R VNPRLA+VFRRQD E QEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFSDPQADGPTIQATNQVALQN +TLTECL+IVRDARAKGLTIAVVLMGYLNPFLAYGLNKLVHDAHRNGVDGFLVVDLLPDDAHDFISKC EYHLSF+PLVTP TTDDRIPFIAS TDSFVYC
Sbjct:    1 MASDLEAAAVGEQGLGTLLPVPPFPVTRSVNPRLAEVFRRQDDETQEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFSDPQADGPTIQATNQVALQNGITLTECLEIVRDARAKGLTIAVVLMGYLNPFLAYGLNKLVHDAHRNGVDGFLVVDLLPDDAHDFISKCQEYHLSFIPLVTPTTTDDRIPFIASTTDSFVYC 207          
BLAST of mRNA_E-fasciculatus_F_contig14481.3243.1 vs. uniprot
Match: A0A6H5K496_9PHAE (Tryptophan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K496_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 7.730e-92
Identity = 153/224 (68.30%), Postives = 169/224 (75.45%), Query Frame = 0
Query:    1 MATDLDAAEVGEQGLATLQPVPPVPVR--RGVNPRLAKVFRRQDGEPQEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFSDPQADGPTIQATNQVALQNNVTLTECLDIV----RDARAKGLTIAVVLMGYLNPFLAYGLNKLVHD-----------AHRNGVDGFLVVDLLPDDAHDFISKCHEYHLSFVPLVTPATTDDRIPFIASATDSFVYC 207
            M +DL+AA VGE       PVPP PV   R VNPRLAKVFRRQDGE QEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPF DPQA GPTIQAT QV +   +      + +    RDARAKGLTI VVLMGYLNPFLAYGLNKL H               + VDGFL +DL PDDAH+F SKC+++HLSF+PLVTP TTD+R+PF+ASATDSFVYC
Sbjct:    1 MVSDLEAAAVGE-------PVPPFPVTSTRSVNPRLAKVFRRQDGETQEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFGDPQAGGPTIQATKQVHVSGGLAERRHPNGMSRNSRDARAKGLTIVVVLMGYLNPFLAYGLNKLAHKLIGTDRLPRPIVTSDSVDGFLAIDLPPDDAHNFSSKCYKHHLSFIPLVTPTTTDNRLPFVASATDSFVYC 217          
BLAST of mRNA_E-fasciculatus_F_contig14481.3243.1 vs. uniprot
Match: D8LLB1_ECTSI (Tryptophan synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLB1_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 4.380e-84
Identity = 134/183 (73.22%), Postives = 153/183 (83.61%), Query Frame = 0
Query:   25 PVRRGVNPRLAKVFRRQDGEPQEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFSDPQADGPTIQATNQVALQNNVTLTECLDIVRDARAKGLTIAVVLMGYLNPFLAYGLNKLVHDAHRNGVDGFLVVDLLPDDAHDFISKCHEYHLSFVPLVTPATTDDRIPFIASATDSFVYC 207
            P  +  +PRLAKVF     E ++AAFI YLTAGYPK+ DTVELLLALQEGG DV+ELGVPF+DPQADG TIQATNQVAL+N VTL +CLD VRDARAKGLT  VVLMGYLNPFLAYGL+KL+ DA   G DGF+VVDLLPD+AHDF++KC    LSFVPLV+P TTDDR+P++ASA DSFVYC
Sbjct:   54 PTSKSASPRLAKVFG-DVAEDKQAAFIPYLTAGYPKRDDTVELLLALQEGGADVIELGVPFTDPQADGATIQATNQVALKNKVTLGDCLDYVRDARAKGLTAPVVLMGYLNPFLAYGLDKLMKDAREAGADGFVVVDLLPDEAHDFVTKCRASELSFVPLVSPTTTDDRMPYVASAADSFVYC 235          
BLAST of mRNA_E-fasciculatus_F_contig14481.3243.1 vs. uniprot
Match: A0A835YTN0_9STRA (Tryptophan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN0_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.420e-75
Identity = 124/195 (63.59%), Postives = 153/195 (78.46%), Query Frame = 0
Query:   13 QGLATLQPVPPVPVRRGVNPRLAKVFRRQDGEPQEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFSDPQADGPTIQATNQVALQNNVTLTECLDIVRDARAKGLTIAVVLMGYLNPFLAYGLNKLVHDAHRNGVDGFLVVDLLPDDAHDFISKCHEYHLSFVPLVTPATTDDRIPFIASATDSFVYC 207
            +GL+ +   PP  V  GVN RL+ VF+  + E  +AAFI YLTAGYPK  DTV+LLL LQEGG DV+ELGVPF+DPQADG TIQ TNQVAL+N + L++CL  V++AR+KGLT  VVLMGYLNPFLAYGL+KL+ D    G DGF+VVDLLPD+A DF++KC    LSF+PLV+P TTDDR+P++ SA D+FVYC
Sbjct:   60 RGLSMVSAEPPAKV--GVNTRLSNVFKGVE-ETGKAAFIPYLTAGYPKADDTVDLLLGLQEGGADVIELGVPFTDPQADGATIQRTNQVALKNKIRLSDCLRYVKEARSKGLTTPVVLMGYLNPFLAYGLDKLMADVKEAGADGFIVVDLLPDEAGDFVTKCRANQLSFIPLVSPTTTDDRLPYVTSAADTFVYC 251          
BLAST of mRNA_E-fasciculatus_F_contig14481.3243.1 vs. uniprot
Match: A0A7S2UWZ9_9STRA (Tryptophan synthase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWZ9_9STRA)

HSP 1 Score: 224 bits (571), Expect = 2.470e-67
Identity = 111/183 (60.66%), Postives = 141/183 (77.05%), Query Frame = 0
Query:   27 RRGVNPRLAKVFR--RQDGEPQEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFSDPQADGPTIQATNQVALQNNVTLTECLDIVRDARAKGLTIAVVLMGYLNPFLAYGLNKLVHDAHRNGVDGFLVVDLLPDDAHDFISKCHEYHLSFVPLVTPATTDDRIPFIASATDSFVYC 207
            RR  + RL +VF+  R+ G+   AAF+ YLTAGYPK  DTV+LLLAL++GG DV+ELGVPF+DPQADG TIQ TN++AL N VT   CL++V+ AR KGLT  V+LMGY NPFLA+GL+KL+ D    GVDGF+VVDL P++   F++ C E+ LSFVPLV+P TTDDRI F++ A DSF+YC
Sbjct:   51 RRAGSARLREVFQTTRESGK---AAFVGYLTAGYPKMEDTVDLLLALEQGGADVIELGVPFTDPQADGATIQHTNEIALANKVTPDLCLEMVKKAREKGLTAPVILMGYYNPFLAHGLDKLMEDCKEAGVDGFIVVDLPPEEGGLFVNTCREHDLSFVPLVSPTTTDDRISFLSDAADSFLYC 230          
BLAST of mRNA_E-fasciculatus_F_contig14481.3243.1 vs. uniprot
Match: A0A7S4DAV4_HETAK (Tryptophan synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAV4_HETAK)

HSP 1 Score: 218 bits (556), Expect = 1.930e-63
Identity = 108/184 (58.70%), Postives = 137/184 (74.46%), Query Frame = 0
Query:   26 VRRGV--NPRLAKVFRRQDGEPQEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFSDPQADGPTIQATNQVALQNNVTLTECLDIVRDARAKGLTIAVVLMGYLNPFLAYGLNKLVHDAHRNGVDGFLVVDLLPDDAHDFISKCHEYHLSFVPLVTPATTDDRIPFIASATDSFVYC 207
            VR GV  + RL   F +   E +++A ++YLTAGYP   DTVEL+LALQ GG DV+ELGVPF+DPQADG TIQ TN++AL N +T  + L+ VR AR +GLTI VVLMGY NPFL YGL+KL+ +    GVDGF++VDL P+   + I+KC EY LSFVPL++P TTD+RI F+A A DSF+YC
Sbjct:   42 VRGGVVESNRLLPAFEKARAE-KKSALVSYLTAGYPAMEDTVELMLALQAGGTDVIELGVPFTDPQADGATIQHTNEIALANKITTKDSLEFVRQARERGLTIPVVLMGYYNPFLRYGLDKLMQECKEVGVDGFIIVDLPPEYGEEIINKCREYGLSFVPLISPTTTDERIAFLADAADSFLYC 224          
BLAST of mRNA_E-fasciculatus_F_contig14481.3243.1 vs. uniprot
Match: A0A7S1U774_9STRA (Tryptophan synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U774_9STRA)

HSP 1 Score: 210 bits (534), Expect = 2.060e-60
Identity = 100/175 (57.14%), Postives = 132/175 (75.43%), Query Frame = 0
Query:   33 RLAKVFRRQDGEPQEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFSDPQADGPTIQATNQVALQNNVTLTECLDIVRDARAKGLTIAVVLMGYLNPFLAYGLNKLVHDAHRNGVDGFLVVDLLPDDAHDFISKCHEYHLSFVPLVTPATTDDRIPFIASATDSFVYC 207
            RL K F  +     +AA + Y+TAGYP   DTVELLL++QEGGVDV+ELGVPF+DPQADG TIQ +NQVAL+N + + +C++ V  ARAKGLT+ VVLMGY NPFLAYG +KL+  A   G+DG ++VDL P++  +FISKC+   L+FVPL+TP +TD+RI  ++ A  SF+YC
Sbjct:   52 RLEKAFG-ESTTSGKAALVGYITAGYPTADDTVELLLSMQEGGVDVIELGVPFTDPQADGATIQGSNQVALKNGIGMQDCINFVEAARAKGLTVPVVLMGYFNPFLAYGADKLIGAAAEAGIDGLIIVDLPPEEDEEFISKCNNAGLAFVPLITPTSTDERIAQLSDAAGSFLYC 225          
BLAST of mRNA_E-fasciculatus_F_contig14481.3243.1 vs. uniprot
Match: A0A7C3AJ19_9CHLR (Tryptophan synthase alpha chain n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C3AJ19_9CHLR)

HSP 1 Score: 196 bits (497), Expect = 4.250e-59
Identity = 95/175 (54.29%), Postives = 118/175 (67.43%), Query Frame = 0
Query:   33 RLAKVFRRQDGEPQEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFSDPQADGPTIQATNQVALQNNVTLTECLDIVRDARAKGLTIAVVLMGYLNPFLAYGLNKLVHDAHRNGVDGFLVVDLLPDDAHDFISKCHEYHLSFVPLVTPATTDDRIPFIASATDSFVYC 207
            R A     ++G P   AF+AY+TAGYP + DTV +LLALQ GG D+VELGVPFSDP ADG TIQ  N+VAL   VT+ EC     DARA G  + ++ MGY NP LAYG  +    A   GVDGF+VVDL P++A DF++ C  Y   F+PLV P T D+RIP +AS TD+F+YC
Sbjct:    8 RSAIELANREGRP---AFVAYVTAGYPTRADTVPILLALQAGGADIVELGVPFSDPLADGATIQRANEVALAQGVTIEECFRFAEDARAAGFRLPLIFMGYYNPVLAYGERRTAARARDAGVDGFIVVDLPPEEAADFLAACRAYGRRFIPLVAPTTKDERIPLLASVTDAFLYC 179          
BLAST of mRNA_E-fasciculatus_F_contig14481.3243.1 vs. uniprot
Match: A0A2A9HG15_CHLB2 (Tryptophan synthase alpha chain n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A2A9HG15_CHLB2)

HSP 1 Score: 192 bits (487), Expect = 8.310e-58
Identity = 96/175 (54.86%), Postives = 120/175 (68.57%), Query Frame = 0
Query:   33 RLAKVFRRQDGEPQEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFSDPQADGPTIQATNQVALQNNVTLTECLDIVRDARAKGLTIAVVLMGYLNPFLAYGLNKLVHDAHRNGVDGFLVVDLLPDDAHDFISKCHEYHLSFVPLVTPATTDDRIPFIASATDSFVYC 207
            RL + F R   E     F+ Y+TAGYP++ DTV +LLA+QEGG DV+ELGVPF+DP ADG TIQ  NQVALQ  VTL +C   VR AR +GLT+ V+LMGY NP LA G  +   +A   G DG++VVDL P++A  F+  C  + LSFVPLV P T D+RI  IAS  D+F+YC
Sbjct:    4 RLRETFARAR-ETGRKLFVGYITAGYPRRADTVPILLAMQEGGADVIELGVPFTDPLADGATIQHANQVALQQGVTLADCFAFVRAAREQGLTVPVLLMGYYNPILARGEARACAEAAAAGADGWIVVDLPPEEAGSFLQACRAHDLSFVPLVAPTTRDERITRIASVADAFLYC 177          
BLAST of mRNA_E-fasciculatus_F_contig14481.3243.1 vs. uniprot
Match: A0A2H5ZCG9_9BACT (Tryptophan synthase alpha chain n=1 Tax=bacterium HR29 TaxID=2035424 RepID=A0A2H5ZCG9_9BACT)

HSP 1 Score: 192 bits (488), Expect = 9.680e-58
Identity = 95/175 (54.29%), Postives = 114/175 (65.14%), Query Frame = 0
Query:   33 RLAKVFRRQDGEPQEAAFIAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFSDPQADGPTIQATNQVALQNNVTLTECLDIVRDARAKGLTIAVVLMGYLNPFLAYGLNKLVHDAHRNGVDGFLVVDLLPDDAHDFISKCHEYHLSFVPLVTPATTDDRIPFIASATDSFVYC 207
            RL        GE + A FIAYLTAGYP + DTV LLLALQ GG D+VELGVPFSDP ADG TIQ  N+VAL   VT+ EC     +AR  G  + ++ MGY NP LAYG  +    A  +GVDGF+VVDL P++A DF+  C  Y   F+PL  P T D RIP +AS TD+F+YC
Sbjct:    6 RLRSAIEAAKGEGRPA-FIAYLTAGYPTRADTVPLLLALQAGGADIVELGVPFSDPLADGTTIQRANEVALAQGVTIEECFRFAEEARTAGFRLPLIFMGYYNPVLAYGERRTAARARDSGVDGFIVVDLPPEEAGDFLGACRAYGRRFIPLAAPTTPDARIPLLASVTDAFLYC 179          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14481.3243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQU8_ECTSI4.690e-12791.30Tryptophan synthase n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5K496_9PHAE7.730e-9268.30Tryptophan synthase n=1 Tax=Ectocarpus sp. CCAP 13... [more]
D8LLB1_ECTSI4.380e-8473.22Tryptophan synthase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835YTN0_9STRA1.420e-7563.59Tryptophan synthase n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2UWZ9_9STRA2.470e-6760.66Tryptophan synthase (Fragment) n=1 Tax=Fibrocapsa ... [more]
A0A7S4DAV4_HETAK1.930e-6358.70Tryptophan synthase n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S1U774_9STRA2.060e-6057.14Tryptophan synthase n=1 Tax=Phaeomonas parva TaxID... [more]
A0A7C3AJ19_9CHLR4.250e-5954.29Tryptophan synthase alpha chain n=1 Tax=Chloroflex... [more]
A0A2A9HG15_CHLB28.310e-5854.86Tryptophan synthase alpha chain n=2 Tax=Chloroflex... [more]
A0A2H5ZCG9_9BACT9.680e-5854.29Tryptophan synthase alpha chain n=1 Tax=bacterium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 30..207
e-value: 3.4E-64
score: 218.1
IPR002028Tryptophan synthase, alpha chainPFAMPF00290Trp_syntAcoord: 44..207
e-value: 7.8E-56
score: 188.8
IPR002028Tryptophan synthase, alpha chainTIGRFAMTIGR00262TIGR00262coord: 44..207
e-value: 3.9E-44
score: 148.4
NoneNo IPR availablePANTHERPTHR43406:SF1TRYPTOPHAN SYNTHASE ALPHA CHAINcoord: 34..207
NoneNo IPR availablePANTHERPTHR43406FAMILY NOT NAMEDcoord: 34..207
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 44..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14481contigE-fasciculatus_F_contig14481:973..3144 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14481.3243.1mRNA_E-fasciculatus_F_contig14481.3243.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14481 973..3144 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14481.3243.1 ID=prot_E-fasciculatus_F_contig14481.3243.1|Name=mRNA_E-fasciculatus_F_contig14481.3243.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=207bp
MATDLDAAEVGEQGLATLQPVPPVPVRRGVNPRLAKVFRRQDGEPQEAAF
IAYLTAGYPKKTDTVELLLALQEGGVDVVELGVPFSDPQADGPTIQATNQ
VALQNNVTLTECLDIVRDARAKGLTIAVVLMGYLNPFLAYGLNKLVHDAH
RNGVDGFLVVDLLPDDAHDFISKCHEYHLSFVPLVTPATTDDRIPFIASA
TDSFVYC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011060RibuloseP-bd_barrel
IPR002028Trp_synthase_suA
IPR013785Aldolase_TIM