mRNA_E-fasciculatus_F_contig14441.3227.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14441.3227.1 vs. uniprot
Match: A0A6H5KPH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH5_9PHAE) HSP 1 Score: 390 bits (1002), Expect = 3.690e-126 Identity = 216/300 (72.00%), Postives = 221/300 (73.67%), Query Frame = 2
Query: 2 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATS---------------------------------------------------------------------------PRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTGEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAAGDGGSMSSAALERVVTTATATYNEWMVDVQKPAATIKMGSNDPLYLSFLPALDTAMVAAWHQPKVCV 676
ERPMTF+TGEDFHVSHT+RKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATS PRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTGEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAA DG SMSSAALERVVTTATATYNEWM+DVQKPAATIKMGSNDPLYLSFLPALD AMVAAWHQPK+ +
Sbjct: 420 ERPMTFETGEDFHVSHTLRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSSSDVPLRDMLWMGALKAGSRMRWMDMFTAEEAHVDPAALLIIRTEADVRALVPLVSSFKDSLMWIDGAADESLGGPRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTGEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAARDGSSMSSAALERVVTTATATYNEWMMDVQKPAATIKMGSNDPLYLSFLPALDPAMVAAWHQPKISI 719
BLAST of mRNA_E-fasciculatus_F_contig14441.3227.1 vs. uniprot
Match: D8LPR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR1_ECTSI) HSP 1 Score: 296 bits (759), Expect = 1.420e-95 Identity = 158/166 (95.18%), Postives = 162/166 (97.59%), Query Frame = 2
Query: 182 MFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTGEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAA-GDGGSMSSAALERVVTTATATYNEWMVDVQKPAATIKMGSNDPLYLSFLPALDTAMVAAWHQPKVCV 676
MFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTGEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAA GDG +MSSAALERVVTTATATYNEWM+DVQKPAATIKMGSNDPLYLSFLPALD AMVAAWHQPK+ +
Sbjct: 1 MFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTGEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAAAGDGSNMSSAALERVVTTATATYNEWMMDVQKPAATIKMGSNDPLYLSFLPALDPAMVAAWHQPKISI 166
BLAST of mRNA_E-fasciculatus_F_contig14441.3227.1 vs. uniprot
Match: D8LPR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR2_ECTSI) HSP 1 Score: 116 bits (291), Expect = 7.670e-27 Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 2
Query: 2 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSPR 169
ERPMTF+TGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATS R
Sbjct: 406 ERPMTFETGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSSR 461
BLAST of mRNA_E-fasciculatus_F_contig14441.3227.1 vs. uniprot
Match: A0A7N0TYA9_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TYA9_KALFE) HSP 1 Score: 62.0 bits (149), Expect = 1.540e-7 Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 2
Query: 2 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAAT 160
E PMTF TGED H+S+T++KY N G+YV+P ++ D+ET G L++V+ T
Sbjct: 364 EAPMTFMTGEDLHLSYTLQKYRNAGSYVLPVDASDKETWGDSEHRLAYVSETT 416
BLAST of mRNA_E-fasciculatus_F_contig14441.3227.1 vs. uniprot
Match: A0A5P1EX86_ASPOF (ENTH domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EX86_ASPOF) HSP 1 Score: 60.5 bits (145), Expect = 5.580e-7 Identity = 25/53 (47.17%), Postives = 38/53 (71.70%), Query Frame = 2
Query: 2 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAAT 160
E+P TF TGED H+S+ ++KY N G+YV+P +S+D+ET G L++V+ T
Sbjct: 1448 EKPFTFMTGEDLHLSYQLQKYRNAGSYVLPVDSNDKETWGDSEHRLAYVSETT 1500
BLAST of mRNA_E-fasciculatus_F_contig14441.3227.1 vs. uniprot
Match: A0A8B7CS91_PHODC (uncharacterized protein LOC103718255 n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7CS91_PHODC) HSP 1 Score: 59.7 bits (143), Expect = 9.250e-7 Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 2
Query: 2 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAAT 160
E P TF TGED H+S+ + KY N G+YV+P + +D+ET+G L++V+ T
Sbjct: 346 ETPFTFTTGEDLHLSYQLHKYRNAGSYVLPVDPNDKETRGDSEHRLAYVSETT 398
BLAST of mRNA_E-fasciculatus_F_contig14441.3227.1 vs. uniprot
Match: W9QUG5_9ROSA (Uncharacterized protein n=2 Tax=Morus notabilis TaxID=981085 RepID=W9QUG5_9ROSA) HSP 1 Score: 59.3 bits (142), Expect = 1.260e-6 Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 2
Query: 2 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAAT 160
E P TF TGED H+S+T++KY N G++V+P +++D+ET G L++V+ T
Sbjct: 398 ETPFTFATGEDLHLSYTLQKYRNAGSFVLPVDANDKETWGDSEHRLAYVSETT 450
BLAST of mRNA_E-fasciculatus_F_contig14441.3227.1 vs. uniprot
Match: A0A6P5H2H3_ANACO (uncharacterized protein LOC109728978 n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5H2H3_ANACO) HSP 1 Score: 58.5 bits (140), Expect = 2.270e-6 Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 2
Query: 2 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAAT 160
E+P TF TGED H+S+ ++KY N G+YV+P + +D ET G L++V+ T
Sbjct: 350 EKPFTFATGEDLHLSYQLQKYRNAGSYVLPVDPNDRETWGDSEHRLAYVSETT 402
BLAST of mRNA_E-fasciculatus_F_contig14441.3227.1 vs. uniprot
Match: Q9FF50_ARATH (Glycosyltransferase family protein 2 n=41 Tax=Brassicaceae TaxID=3700 RepID=Q9FF50_ARATH) HSP 1 Score: 58.2 bits (139), Expect = 3.060e-6 Identity = 23/53 (43.40%), Postives = 37/53 (69.81%), Query Frame = 2
Query: 2 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAAT 160
E+P TF TGED H+S+ ++KY N G++V+P + +D+ET G L++V+ T
Sbjct: 355 EKPFTFSTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETT 407
BLAST of mRNA_E-fasciculatus_F_contig14441.3227.1 vs. uniprot
Match: A0A161XBB9_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A161XBB9_DAUCS) HSP 1 Score: 58.2 bits (139), Expect = 3.060e-6 Identity = 24/53 (45.28%), Postives = 37/53 (69.81%), Query Frame = 2
Query: 2 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAAT 160
E+PMTF TGED H+S+ ++KY N G++V+P + D+ET G L++V+ T
Sbjct: 358 EKPMTFMTGEDLHLSYQLQKYRNAGSFVLPVDPKDKETWGDSEHRLAYVSETT 410 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14441.3227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14441.3227.1 >prot_E-fasciculatus_F_contig14441.3227.1 ID=prot_E-fasciculatus_F_contig14441.3227.1|Name=mRNA_E-fasciculatus_F_contig14441.3227.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=122bp RAADDLRYRGRLPRLSHHAQVRQHRYVRDAVQLRRRRDQGQQVQGAVLREback to top mRNA from alignment at E-fasciculatus_F_contig14441:34..3060+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14441.3227.1 ID=mRNA_E-fasciculatus_F_contig14441.3227.1|Name=mRNA_E-fasciculatus_F_contig14441.3227.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3027bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14441:34..3060+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14441:34..3060+ >mRNA_E-fasciculatus_F_contig14441.3227.1 ID=mRNA_E-fasciculatus_F_contig14441.3227.1|Name=mRNA_E-fasciculatus_F_contig14441.3227.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=732bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14441:34..3060+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |