prot_E-fasciculatus_F_contig14430.3222.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14430.3222.1
Unique Nameprot_E-fasciculatus_F_contig14430.3222.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length121
Homology
BLAST of mRNA_E-fasciculatus_F_contig14430.3222.1 vs. uniprot
Match: D7FXB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXB5_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 4.130e-37
Identity = 60/102 (58.82%), Postives = 81/102 (79.41%), Query Frame = 0
Query:    7 AMANSLPAMMYGAGDDEHPLPETVGCMQELVAQYVSHVTSEACLAADLRGNLDTECFFFAVRHDEPKLKRVKHILDTDLRIKSCTRARSADDRLSTIFHPSF 108
            ++A+SLP MMYG GD++HPLPETV  MQE+V +YV +VT +AC AA+++G LDTECF  AVR+D+ K KRVK +LD ++ IK+CTR R  DD L T++HP+F
Sbjct:   23 SIADSLPMMMYGFGDEQHPLPETVAYMQEVVGEYVQYVTDKACKAAEVKGKLDTECFVLAVRNDKAKFKRVKELLDMNVHIKNCTRQRYVDDNL-TVYHPTF 123          
BLAST of mRNA_E-fasciculatus_F_contig14430.3222.1 vs. uniprot
Match: D8LPL2_ECTSI (EsV-1-193/196 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL2_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 4.550e-17
Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = 0
Query:   15 MMYGAGDDEHPLPETVGCMQELVAQYVSHVTSEACLAA 52
            MMYGAGDDEHPLPETVGCMQ+LVA+YVSHVTSEACL +
Sbjct:    1 MMYGAGDDEHPLPETVGCMQQLVAEYVSHVTSEACLVS 38          
BLAST of mRNA_E-fasciculatus_F_contig14430.3222.1 vs. uniprot
Match: Q8QN96_ESV1K (EsV-1-193 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN96_ESV1K)

HSP 1 Score: 75.9 bits (185), Expect = 4.520e-16
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
Query:   15 MMYGAGDDEHPLPETVGCMQELVAQYVSHVTSEACLAA 52
            MMYGAGDDEHPLPETV CMQ+LVA+YVSHVTSEACL +
Sbjct:    9 MMYGAGDDEHPLPETVACMQQLVAEYVSHVTSEACLVS 46          
BLAST of mRNA_E-fasciculatus_F_contig14430.3222.1 vs. uniprot
Match: Q8QN93_ESV1K (EsV-1-196 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN93_ESV1K)

HSP 1 Score: 75.9 bits (185), Expect = 7.850e-16
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0
Query:   14 AMMYGAGDDEHPLPETVGCMQELVAQYVSHVTSEACLAA 52
            +MMYGAGDDEHPLPETV CMQ+LVA+YVSHVTSEACL +
Sbjct:   31 SMMYGAGDDEHPLPETVDCMQQLVAEYVSHVTSEACLVS 69          
BLAST of mRNA_E-fasciculatus_F_contig14430.3222.1 vs. uniprot
Match: UPI000C1CFECD (transcription initiation factor TFIID subunit 13-like isoform X1 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CFECD)

HSP 1 Score: 73.2 bits (178), Expect = 3.490e-14
Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 0
Query:   12 LPAMMYGAGDDEHPLPETVGCMQELVAQYVSHVTSEACLAADLRGNLDTECFFFAVRHDEPKLKRVKHILDTDLRIKSCTRARSADD-RLSTI 103
            L  MMYG GD+++PLPETV  ++++V +YV+ +  +A   A  RG L TE F F +R D PKL R   +L  +  +K   +A   D+ +L+TI
Sbjct:   35 LQHMMYGFGDNQNPLPETVALVEDIVVEYVTDLVHKAQDTASKRGKLLTEDFLFLIRKDVPKLNRCTELLSMNEELKQARKAFEVDEEKLATI 127          
BLAST of mRNA_E-fasciculatus_F_contig14430.3222.1 vs. uniprot
Match: A0A6I9TB08_SESIN (transcription initiation factor TFIID subunit 13 n=5 Tax=Lamiales TaxID=4143 RepID=A0A6I9TB08_SESIN)

HSP 1 Score: 72.0 bits (175), Expect = 9.830e-14
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0
Query:   12 LPAMMYGAGDDEHPLPETVGCMQELVAQYVSHVTSEACLAADLRGNLDTECFFFAVRHDEPKLKRVKHILDTDLRIKSCTRARSADD-RLSTI 103
            L  MMYG GDD++PLPETV   +++V +YV+ +  +A   A  RG L TE F F +R D PKL R   +L  +  +K   +A   D+ +L++I
Sbjct:   35 LQHMMYGFGDDQNPLPETVALAEDIVVEYVTDMVHKAQDIASKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAFEVDEEKLASI 127          
BLAST of mRNA_E-fasciculatus_F_contig14430.3222.1 vs. uniprot
Match: C1E6J7_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1E6J7_MICCC)

HSP 1 Score: 72.8 bits (177), Expect = 1.680e-13
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 0
Query:    7 AMANSLPAMMYGAGDDEHPLPETVGCMQELVAQYVSHVTSEACLAADLRGNLDTECFFFAVRHDEPKLKRVKHILDTDLRIKSCTR 92
            ++A  L  MMYG GD E+PLPETV  ++EL   Y++    +A  AA+ RG L TE   + +RHDE KL R   +L+ + ++K   +
Sbjct:   81 SLAKDLRYMMYGFGDAENPLPETVDLVEELTIDYLTKFAKKAMEAANRRGRLQTEDLLYVIRHDEKKLARCMELLEMNEQLKEARK 166          
BLAST of mRNA_E-fasciculatus_F_contig14430.3222.1 vs. uniprot
Match: UPI00053FB6EB (transcription initiation factor TFIID subunit 13 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FB6EB)

HSP 1 Score: 70.9 bits (172), Expect = 2.830e-13
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 0
Query:   12 LPAMMYGAGDDEHPLPETVGCMQELVAQYVSHVTSEACLAADLRGNLDTECFFFAVRHDEPKLKRVKHILDTDLRIKSCTRARSADD-RLSTI 103
            L  MMYG GDD++PLPE+V  ++++V +YV+ +  +A   A  RG L TE F F +R D PKL R   +L  +  +K   +A   D+ +L T+
Sbjct:   36 LQHMMYGYGDDQNPLPESVALVEDIVVEYVTDLVYKAQDVASKRGKLLTEDFMFLIRKDLPKLNRCTELLAMNEELKQARKAFDMDEEKLGTV 128          
BLAST of mRNA_E-fasciculatus_F_contig14430.3222.1 vs. uniprot
Match: M5X1F9_PRUPE (Uncharacterized protein n=10 Tax=Rosales TaxID=3744 RepID=M5X1F9_PRUPE)

HSP 1 Score: 70.1 bits (170), Expect = 9.110e-13
Identity = 32/87 (36.78%), Postives = 51/87 (58.62%), Query Frame = 0
Query:   12 LPAMMYGAGDDEHPLPETVGCMQELVAQYVSHVTSEACLAADLRGNLDTECFFFAVRHDEPKLKRVKHILDTDLRIKSCTRARSADD 98
            L  MMYG GDD++PLPE+V  M+++V +Y++ +  +A      RG L  E F + +R D PKL R + +L  +  +K   +A   D+
Sbjct:   35 LQHMMYGFGDDQNPLPESVALMEDIVVEYITDLVHKAQDIGSKRGKLSVEDFLYLIRKDFPKLNRCRELLSMNEELKQARKAFETDE 121          
BLAST of mRNA_E-fasciculatus_F_contig14430.3222.1 vs. uniprot
Match: A0A836CID2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CID2_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.460e-12
Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 0
Query:    7 AMANSLPAMMYGAGDDEHPLPETVGCMQELVAQYVSHVTSEACL---AADLRGNLDTECFFFAVRHDEPKLKRVKHILDTDLRIKSCTRARSADDRLSTIFHPSFGAV-----APQQQTT 118
            A+ ++LP MMYG+GD + PL E+V  +  L+AQ++  +T  A     A D  G +DTE     +R D  KLKRV  +LD +  +K+ TR   +D+    ++     AV     +P QQ T
Sbjct:   49 AILSALPVMMYGSGDHDKPLRESVELVGALLAQHIKELTYRALRHADATDAPGRIDTETVIHIIRKDHAKLKRVSELLDFNKELKAVTRLHFSDET-DAVYDADATAVLELRHSPVQQQT 167          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14430.3222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXB5_ECTSI4.130e-3758.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LPL2_ECTSI4.550e-1789.47EsV-1-193/196 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
Q8QN96_ESV1K4.520e-1686.84EsV-1-193 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
Q8QN93_ESV1K7.850e-1684.62EsV-1-196 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
UPI000C1CFECD3.490e-1440.86transcription initiation factor TFIID subunit 13-l... [more]
A0A6I9TB08_SESIN9.830e-1440.86transcription initiation factor TFIID subunit 13 n... [more]
C1E6J7_MICCC1.680e-1340.70Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]
UPI00053FB6EB2.830e-1339.78transcription initiation factor TFIID subunit 13 n... [more]
M5X1F9_PRUPE9.110e-1336.78Uncharacterized protein n=10 Tax=Rosales TaxID=374... [more]
A0A836CID2_9STRA3.460e-1235.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 8..50
e-value: 6.6E-12
score: 46.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 10..49
IPR003195Transcription initiation factor IID, subunit 13PFAMPF02269TFIID-18kDacoord: 10..85
e-value: 2.3E-16
score: 59.6
IPR003195Transcription initiation factor IID, subunit 13PANTHERPTHR11380TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATEDcoord: 8..90
NoneNo IPR availablePANTHERPTHR11380:SF5TRANSCRIPTION INITIATION PROTEIN SPT3 HOMOLOGcoord: 8..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14430contigE-fasciculatus_F_contig14430:1135..1751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14430.3222.1mRNA_E-fasciculatus_F_contig14430.3222.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14430 1135..1751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14430.3222.1 ID=prot_E-fasciculatus_F_contig14430.3222.1|Name=mRNA_E-fasciculatus_F_contig14430.3222.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=121bp
MAGGSDAMANSLPAMMYGAGDDEHPLPETVGCMQELVAQYVSHVTSEACL
AADLRGNLDTECFFFAVRHDEPKLKRVKHILDTDLRIKSCTRARSADDRL
STIFHPSFGAVAPQQQTTPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003195TFIID_TAF13
IPR009072Histone-fold