prot_E-fasciculatus_F_contig144.3201.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig144.3201.1
Unique Nameprot_E-fasciculatus_F_contig144.3201.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length189
Homology
BLAST of mRNA_E-fasciculatus_F_contig144.3201.1 vs. uniprot
Match: D7G386_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G386_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 3.000e-64
Identity = 122/188 (64.89%), Postives = 126/188 (67.02%), Query Frame = 0
Query:    1 MGRPDSTSDGAVRSATTAPPSPSSSSAWSTAASSAVVPAFAGVREQEPSSTMSPARRRGVGGEGAGSAPSSAAPVAEARAASHKIVRLAPRVYQVPTLRYCCVQVLAEHADKIVDLRGVGQDTARQLLEEIMGRQKLTYPLAKVFMNCGDDELSRQARSIVAVQLAIASLNLWDAIPAGRQGRHSRHL 188
            MG PDSTSDGA R A+TAPPS                                           AGS PS AAPVAE R ASH+I++LAPRVYQ PTLRYCCVQVLAEHADKIVDLRGVGQDTARQLLEEIMGRQKLTYPLAKVFMNCGDDELS           AIASLNLWDAIPAGRQGRHSRHL
Sbjct:    1 MGYPDSTSDGAGRPASTAPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSIPSPAAPVAEVRTASHRIMKLAPRVYQAPTLRYCCVQVLAEHADKIVDLRGVGQDTARQLLEEIMGRQKLTYPLAKVFMNCGDDELSS----------AIASLNLWDAIPAGRQGRHSRHL 178          
BLAST of mRNA_E-fasciculatus_F_contig144.3201.1 vs. uniprot
Match: A0A836C951_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C951_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.570e-14
Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = 0
Query:   79 RAASHKIVRLAPRVYQVPTLRYCCVQVLAEHADKIVDLRGVGQDTARQLLEEIMGRQKLTYPLAKVFMNCGDDELSRQARSIVAVQLAIASLNLWDAIPAGR 180
            R  +H+ + +  +   VP+L    +  LA+H + I D+  + +  A QLL EIM RQKLT+ LAKVFMNCG D++ R          A+ SLNL++A+P G+
Sbjct:   40 RKPTHRTITVQMKCAAVPSLTDMAISKLADHCESITDISCLPEMLAVQLLSEIMRRQKLTFALAKVFMNCGHDDICR----------AMESLNLFNAVPVGK 131          
BLAST of mRNA_E-fasciculatus_F_contig144.3201.1 vs. uniprot
Match: A0A7S2D6D4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6D4_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.420e-7
Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = 0
Query:   77 EARAASHKIVRLAPRVYQVPTLRYCCVQVLAEHADKIVDLRGVGQDTARQLLEEIMGRQKLTYPLAKVFM 146
            E  A  H   ++A + Y+VP+L   C++ LA+++D IVDL  + + +   LL +IM RQKLT PLA+VF+
Sbjct:    1 EPYAPRHTTTKVAVK-YEVPSLSGLCIKFLADNSDSIVDLSNIDERSGVMLLMQIMRRQKLTVPLARVFI 69          
BLAST of mRNA_E-fasciculatus_F_contig144.3201.1 vs. uniprot
Match: A0A8J5XKY4_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKY4_DIALT)

HSP 1 Score: 51.6 bits (122), Expect = 2.620e-5
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 0
Query:   85 IVRLAPRVYQVPTLRYCCVQVLAEHADKIVDLRGVG-QDTARQLLEEIMGRQKLTYPLAKVFMNCGDDELSRQARSIVAVQLAIASLNLWDAIPAGRQGRHSRH 187
            +  L  R  +VP L   C+  +A   + +VDLR V  Q     LL  I+   KL + LA+VF  CG +E+ +          A+ + +L DA+P     R SRH
Sbjct:   18 VAPLQRRDSRVPKLVDLCLDRMASRLESVVDLRPVKEQSLCMALLHRIISNGKLDFRLARVFQQCGHEEIEQ----------ALMTADLLDALPGPMDVRASRH 111          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig144.3201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G386_ECTSI3.000e-6464.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C951_9STRA1.570e-1440.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2D6D4_9STRA2.420e-742.86Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J5XKY4_DIALT2.620e-532.69Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig144contigE-fasciculatus_F_contig144:25557..28153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig144.3201.1mRNA_E-fasciculatus_F_contig144.3201.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig144 24742..28209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig144.3201.1 ID=prot_E-fasciculatus_F_contig144.3201.1|Name=mRNA_E-fasciculatus_F_contig144.3201.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=189bp
MGRPDSTSDGAVRSATTAPPSPSSSSAWSTAASSAVVPAFAGVREQEPSS
TMSPARRRGVGGEGAGSAPSSAAPVAEARAASHKIVRLAPRVYQVPTLRY
CCVQVLAEHADKIVDLRGVGQDTARQLLEEIMGRQKLTYPLAKVFMNCGD
DELSRQARSIVAVQLAIASLNLWDAIPAGRQGRHSRHL*
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