mRNA_E-fasciculatus_F_contig144.3198.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: D7G389_ECTSI (Ras-related protein Rab n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G389_ECTSI) HSP 1 Score: 251 bits (641), Expect = 2.990e-82 Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 1
Query: 1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLDIPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLERIPASGHPSGRLGMKV 369
DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLDIPIDREALTWFCDRHGFAGWFETSAKQNINIDE SRFLVEKVLERIPASGHPSGRLGMK+
Sbjct: 139 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLDIPIDREALTWFCDRHGFAGWFETSAKQNINIDEGSRFLVEKVLERIPASGHPSGRLGMKL 261
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: A0A6V1S8I5_HETAK (Ras-related protein Rab n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S8I5_HETAK) HSP 1 Score: 146 bits (369), Expect = 6.460e-42 Identity = 68/119 (57.14%), Postives = 88/119 (73.95%), Query Frame = 1
Query: 1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLD-IPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLERIPASGHPSGR 354
DRFG IAR YYK++ GAL+VYD R +F TV++WK EID+KV+LPDG +P+VLLANKCDLD +D+ L FC HGF GWF+TSA+ NINI++A RFLV+ +LE+ P+ R
Sbjct: 69 DRFGVIARTYYKDSYGALIVYDASRPPTFDTVEKWKREIDDKVKLPDGSNIPIVLLANKCDLDKAEVDKSYLDQFCQEHGFIGWFDTSARLNINIEQACRFLVDNLLEKRDLLNPPAKR 187
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: F0YEW4_AURAN (Ras-related protein Rab (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEW4_AURAN) HSP 1 Score: 140 bits (352), Expect = 1.010e-39 Identity = 67/100 (67.00%), Postives = 78/100 (78.00%), Query Frame = 1
Query: 1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDL-DIPIDREALTWFCDRHGFAGWFETSAKQNINIDEASR 297
DRFG+IAR YYK+A GA LVYDI R +FKT+ +WK EID KV LP+G LPVVLLANKCDL D+ IDR+ L FC HGF GWFETSAK ++NID A+R
Sbjct: 78 DRFGAIARVYYKDAFGAFLVYDISRPETFKTIVKWKDEIDSKVHLPNGMALPVVLLANKCDLEDVAIDRQELDDFCRSHGFIGWFETSAKADVNIDTAAR 177
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: A0A7S2S186_9STRA (Ras-related protein Rab n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S186_9STRA) HSP 1 Score: 139 bits (351), Expect = 5.030e-39 Identity = 67/108 (62.04%), Postives = 84/108 (77.78%), Query Frame = 1
Query: 1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLD-IPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLE 321
DRFG+I+R YYK+ALGA LVYD+ R ++F TV +WKGEID KV LP+ LPVVLLANKCD++ + ID +AL FC+ HGF WFETSAK + ID A+RFL+E +LE
Sbjct: 68 DRFGAISRVYYKDALGAFLVYDLARPATFDTVVKWKGEIDAKVVLPNHEPLPVVLLANKCDIEGVKIDSDALDKFCEEHGFIAWFETSAKTDHKIDAAARFLLENILE 175
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: A0A7S2G1P4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1P4_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.830e-38 Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1
Query: 1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLD-IPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVL 318
DRFG+IAR YYK+A GA LVYD+ R +F+TV +WK EID KV LP+G LPVVLLANKCD++ + ID + L FC HGF WFETSAK + ID A+R+LVE VL
Sbjct: 10 DRFGAIARVYYKDAYGAFLVYDLSRPRTFETVAKWKKEIDSKVLLPNGKPLPVVLLANKCDIEGVEIDADELNRFCTEHGFITWFETSAKTDHKIDAAARYLVENVL 116
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: A0A4U1FQJ1_MONMO (Uncharacterized protein (Fragment) n=3 Tax=Cetacea TaxID=9721 RepID=A0A4U1FQJ1_MONMO) HSP 1 Score: 135 bits (339), Expect = 3.160e-38 Identity = 63/108 (58.33%), Postives = 79/108 (73.15%), Query Frame = 1
Query: 1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDL--DIPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVL 318
+RFG++ R YYKEA+GA +V+DI R S+F+ V +WK ++D KV LP+G +P VLLANKCD D + + FC HGF GWFETSAK NINIDEASRFLVE +L
Sbjct: 2 ERFGNMTRVYYKEAVGAFIVFDISRGSTFEAVLKWKNDLDSKVHLPNGNPIPAVLLANKCDQKKDSGQNTPQMDQFCKEHGFTGWFETSAKDNINIDEASRFLVENIL 109
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: L5KFT0_PTEAL (Ras-related protein Rab n=2 Tax=Pteropus alecto TaxID=9402 RepID=L5KFT0_PTEAL) HSP 1 Score: 136 bits (343), Expect = 6.870e-38 Identity = 64/108 (59.26%), Postives = 81/108 (75.00%), Query Frame = 1
Query: 1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDL--DIPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVL 318
+RFG++ R YYKEA+GA +V+DI R S+F+ V +WK ++D KV LP+GG +PVVLLANKCD D + + FC HGF GWFETSAK NINIDEA+RFLVE +L
Sbjct: 76 ERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKSDLDSKVHLPNGGPIPVVLLANKCDQKKDGGQNPSQMEQFCKEHGFTGWFETSAKDNINIDEAARFLVENIL 183
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: UPI00109F5083 (ras-related protein Rab-32 n=1 Tax=Grammomys surdaster TaxID=491861 RepID=UPI00109F5083) HSP 1 Score: 136 bits (343), Expect = 8.550e-38 Identity = 64/108 (59.26%), Postives = 79/108 (73.15%), Query Frame = 1
Query: 1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDL--DIPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVL 318
+RFG++ R YYKEALGA +V+D+ RSS+F V +WK ++D KV LP+G R+P VLLANKCD D + FC HGF GWFETSAK NINIDEA+RFLVE +L
Sbjct: 84 ERFGNMTRVYYKEALGAFIVFDVSRSSTFDAVLKWKNDLDSKVHLPNGSRIPAVLLANKCDQKKDSSQSPSQMDQFCKDHGFTGWFETSAKDNINIDEATRFLVENML 191
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: RAB32_HUMAN (Ras-related protein Rab-32 n=30 Tax=Euarchontoglires TaxID=314146 RepID=RAB32_HUMAN) HSP 1 Score: 136 bits (343), Expect = 9.020e-38 Identity = 64/108 (59.26%), Postives = 81/108 (75.00%), Query Frame = 1
Query: 1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDL--DIPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVL 318
+RFG++ R YYKEA+GA +V+DI RSS+F+ V +WK ++D KV LP+G +P VLLANKCD D + FC HGFAGWFETSAK NINI+EA+RFLVEK+L
Sbjct: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: A0A7S2V4T6_9STRA (Ras-related protein Rab n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4T6_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.040e-37 Identity = 66/109 (60.55%), Postives = 82/109 (75.23%), Query Frame = 1
Query: 1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLD-IPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLER 324
DRFG+IAR YYK+A GA+LVYD+ R +F+ V +WK EID KV LP+G +PVVLL NK DL+ +D E L FC +HGF GWF+TSAK N NI EA+ FLVEK+LE+
Sbjct: 69 DRFGAIARVYYKDAFGAMLVYDVTRPPTFEMVSKWKEEIDTKVSLPNGEPIPVVLLGNKSDLEKAKVDTEYLDEFCKQHGFVGWFDTSAKTNQNIVEAATFLVEKILEK 177 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig144.3198.1 >prot_E-fasciculatus_F_contig144.3198.1 ID=prot_E-fasciculatus_F_contig144.3198.1|Name=mRNA_E-fasciculatus_F_contig144.3198.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=131bp DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRback to top mRNA from alignment at E-fasciculatus_F_contig144:86..2172- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig144.3198.1 ID=mRNA_E-fasciculatus_F_contig144.3198.1|Name=mRNA_E-fasciculatus_F_contig144.3198.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2087bp|location=Sequence derived from alignment at E-fasciculatus_F_contig144:86..2172- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig144:86..2172- >mRNA_E-fasciculatus_F_contig144.3198.1 ID=mRNA_E-fasciculatus_F_contig144.3198.1|Name=mRNA_E-fasciculatus_F_contig144.3198.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=786bp|location=Sequence derived from alignment at E-fasciculatus_F_contig144:86..2172- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |