mRNA_E-fasciculatus_F_contig14368.3175.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14368.3175.1 vs. uniprot
Match: A0A6H5KA73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA73_9PHAE) HSP 1 Score: 413 bits (1061), Expect = 3.000e-129 Identity = 263/301 (87.38%), Postives = 272/301 (90.37%), Query Frame = 1
Query: 1 MQAEVQGKLRELEEEVARYKEENERARLAXXXXXXXXXXXXXXXXEVREWAEAERAAVEAWCTEQRQASAREKRAVLKQVQGLRARAQAGGGLGGGTAVERRQRQEIEGLKATIERAKLDAEAAKKKSRASERRLQQQIKGGAERVAELEGQVSFLERQRVDVWASATGGGSGTLGGTGGGRPSRASVVTPAVSRSMNDGVRKSTNGAAKARAGGARSRVATVTLSAEAEPARGGGVRRPAERDHEQEPRKHEAXXXXXXXXXXXXXWERGGDSNVRKEEARAFHEGGL--MRERRQDGGG 897
MQAEVQGKLRELEEEVARYKEENERARLAXXXXXXXXXXXXXXXXEVREWAEAERAAVEAWCTEQRQASAREKRA LKQ+QGLRARAQAGGGLGGGTAVERRQRQEIEGLKATIERAKLDAEAAKKKSRASERRLQQQIKGGAER+AELEGQVSFLERQRVDVWASATGGGSGTLGGTGG RPSRASVV PAVSRSMNDGVRKS+NGA KARAGGARSRVATVTLSAEAEPARG G RRPAER H Q+PRK EA WERGGD +VR+E + F EGG+ +RERRQDGGG
Sbjct: 825 MQAEVQGKLRELEEEVARYKEENERARLAXXXXXXXXXXXXXXXXEVREWAEAERAAVEAWCTEQRQASAREKRAALKQIQGLRARAQAGGGLGGGTAVERRQRQEIEGLKATIERAKLDAEAAKKKSRASERRLQQQIKGGAERIAELEGQVSFLERQRVDVWASATGGGSGTLGGTGG-RPSRASVVAPAVSRSMNDGVRKSSNGAGKARAGGARSRVATVTLSAEAEPARGAGSRRPAERGHGQDPRKQEATAARRQDGGGTA-WERGGDEDVREEGTKGFGEGGVTVVRERRQDGGG 1123
BLAST of mRNA_E-fasciculatus_F_contig14368.3175.1 vs. uniprot
Match: D8LC84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC84_ECTSI) HSP 1 Score: 389 bits (1000), Expect = 8.230e-121 Identity = 245/269 (91.08%), Postives = 249/269 (92.57%), Query Frame = 1
Query: 1 MQAEVQGKLRELEEEVARYKEENERARLAXXXXXXXXXXXXXXXXEVREWAEAERAAVEAWCTEQRQASAREKRAVLKQVQGLRARAQAGGGLGGGTAVERRQRQEIEGLKATIERAKLDAEAAKKKSRASERRLQQQIKGGAERVAELEGQVSFLERQRVDVWASATGGGSGTLGGTGGGRPSRASVVTPAVSRSMNDGVRKSTNGAAKARAGGARSRVATVTLSAEAEPARGGGVRRPAERDHEQEPRKHEAXXXXXXXXXXXXXWE 807
MQAEVQGKLRELEEEVARYKEENERARLAXXXXXXXXXXXXXXXXEVREWAEAERAAVEAWCTEQRQASAREKRA LKQ+QGLRARAQAGGGLGGGTAVERRQRQEIEGLKATIERAKLD EAAKKKSRASERRLQQQIKGGAERVAELEGQVSFLERQRVDVWASATGGGSGTLGGTGG RPSRASVVTPAVSRSMNDGVRKS+NG+AKARAGGARSRVATVTLSAEAEPARG G RRPAER H+QEPRKHE WE
Sbjct: 832 MQAEVQGKLRELEEEVARYKEENERARLAXXXXXXXXXXXXXXXXEVREWAEAERAAVEAWCTEQRQASAREKRAALKQIQGLRARAQAGGGLGGGTAVERRQRQEIEGLKATIERAKLDTEAAKKKSRASERRLQQQIKGGAERVAELEGQVSFLERQRVDVWASATGGGSGTLGGTGG-RPSRASVVTPAVSRSMNDGVRKSSNGSAKARAGGARSRVATVTLSAEAEPARGAGSRRPAERGHDQEPRKHEEATAARGQDGGGAAWE 1099
BLAST of mRNA_E-fasciculatus_F_contig14368.3175.1 vs. uniprot
Match: A0A7S3UP67_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UP67_HETAK) HSP 1 Score: 68.9 bits (167), Expect = 1.360e-10 Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 298 ERRQRQEIEGLKATIERAKLDAEAAKKKSRASERRLQQQIKGGAERVAELEGQVSFLERQRVDVWASA 501
ERR ++EI LKATIE+ K++ E KK R+SERRL+++IK ++ +LE QV+FLE+QRVD+W A
Sbjct: 76 ERRDKEEIIALKATIEKMKIEHETETKKWRSSERRLREKIKNQISQITDLEAQVAFLEKQRVDLWLEA 143
BLAST of mRNA_E-fasciculatus_F_contig14368.3175.1 vs. uniprot
Match: A0A7S2DKJ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DKJ6_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 8.000e-9 Identity = 32/73 (43.84%), Postives = 53/73 (72.60%), Query Frame = 1
Query: 280 GGGTAVERRQRQEIEGLKATIERAKLDAEAAKKKSRASERRLQQQIKGGAERVAELEGQVSFLERQRVDVWAS 498
GG T++ R++R E+E L+ATIE+ K+D KK++R +E+RL+ Q++ R ++LE Q+ +LERQRV +A+
Sbjct: 1 GGSTSLNRKERAEVEALRATIEKLKIDDSTNKKRTRTNEQRLRNQLREQMRRTSDLEQQLQYLERQRVAEYAT 73 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14368.3175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14368.3175.1 >prot_E-fasciculatus_F_contig14368.3175.1 ID=prot_E-fasciculatus_F_contig14368.3175.1|Name=mRNA_E-fasciculatus_F_contig14368.3175.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=299bp MQAEVQGKLRELEEEVARYKEENERARLARRKQETALAEVMRKRQEVREWback to top mRNA from alignment at E-fasciculatus_F_contig14368:573..3168+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14368.3175.1 ID=mRNA_E-fasciculatus_F_contig14368.3175.1|Name=mRNA_E-fasciculatus_F_contig14368.3175.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2596bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14368:573..3168+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14368:573..3168+ >mRNA_E-fasciculatus_F_contig14368.3175.1 ID=mRNA_E-fasciculatus_F_contig14368.3175.1|Name=mRNA_E-fasciculatus_F_contig14368.3175.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1794bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14368:573..3168+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |