prot_E-fasciculatus_F_contig14356.3169.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14356.3169.1
Unique Nameprot_E-fasciculatus_F_contig14356.3169.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length110
Homology
BLAST of mRNA_E-fasciculatus_F_contig14356.3169.1 vs. uniprot
Match: A0A835Z2V2_9STRA (Sister chromatid cohesion protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2V2_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.170e-17
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    1 DKGVSVRKSVVRTLRGVLLWRSSHPRHTAICRALVERAVVVREEDTIRDLIRDTFQEIWFSE 62
            D GVSVRKSVVRTLRG L     H R + IC ALVER+ +V+EEDTIRD+IRDTFQ++WFSE
Sbjct:  826 DVGVSVRKSVVRTLRGCLSTYPCHKRRSEICSALVERSSIVKEEDTIRDIIRDTFQDLWFSE 887          
BLAST of mRNA_E-fasciculatus_F_contig14356.3169.1 vs. uniprot
Match: A0A7R9UFA3_9STRA (Sister chromatid cohesion protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFA3_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 7.810e-10
Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    1 DKGVSVRKSVVRTLRGVLLWRSSHPRHTAICRALVERAVVVREEDTIRDLIRDTFQEIWFSEEDDGAA 68
            DKGVSVRKSVV+ L+GVLL   ++P+   +C ALV+   + REED++++L+   F +IWF    +G A
Sbjct:  230 DKGVSVRKSVVKILQGVLLKFPAYPKRVLLCTALVKSLNMRREEDSVKELVSSIFAKIWFDNAIEGGA 297          
BLAST of mRNA_E-fasciculatus_F_contig14356.3169.1 vs. uniprot
Match: A0A7S2RVL6_9STRA (Sister chromatid cohesion protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RVL6_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.020e-9
Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 DKGVSVRKSVVRTLRGVLLWRSSHPRHTAICRALVERAVVVREEDTIRDLIRDTFQEIWFSE 62
            D G+SVRK VV+ LRG+L+     P  T I  ALVER +  +EEDTI+D+IRD F+ +WFSE
Sbjct:  805 DLGLSVRKRVVKILRGLLVAHRELPVRTQIHTALVERLLDSQEEDTIKDMIRDLFRFLWFSE 866          
BLAST of mRNA_E-fasciculatus_F_contig14356.3169.1 vs. uniprot
Match: A0A151ZH98_9MYCE (Sister chromatid cohesion protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZH98_9MYCE)

HSP 1 Score: 63.5 bits (153), Expect = 2.020e-9
Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 DKGVSVRKSVVRTLRGVLLWRSSHPRHTAICRALVERAVVVREEDTIRDLIRDTFQEIWFSE 62
            DKG+SVRK VV+TL  +   + +HP+   ICR LV R   + ++D+IRDLI  TFQ++WFS+
Sbjct: 1025 DKGISVRKRVVKTLNEICTSQPNHPKLPEICRILVSR---INDDDSIRDLILKTFQDLWFSD 1083          
BLAST of mRNA_E-fasciculatus_F_contig14356.3169.1 vs. uniprot
Match: F1A4K5_DICPU (Sister chromatid cohesion protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A4K5_DICPU)

HSP 1 Score: 62.8 bits (151), Expect = 3.780e-9
Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    1 DKGVSVRKSVVRTLRGVLLWRSSHPRHTAICRALVERAVVVREEDTIRDLIRDTFQEIWFSE 62
            DKG+SVRK VV+TL  + +    HP+   ICR LV R   V +E+ I+DL+  TFQ++WFSE
Sbjct: 1163 DKGISVRKRVVKTLNEICIHHMQHPKIPFICRVLVTR---VSDEEAIKDLVLKTFQDLWFSE 1221          
BLAST of mRNA_E-fasciculatus_F_contig14356.3169.1 vs. uniprot
Match: Q54RK7_DICDI (Sister chromatid cohesion protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54RK7_DICDI)

HSP 1 Score: 62.4 bits (150), Expect = 5.160e-9
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 DKGVSVRKSVVRTLRGVLLWRSSHPRHTAICRALVERAVVVREEDTIRDLIRDTFQEIWFSE 62
            DKG+SVRK VV+TL  + L    HP+   +CR LV R   V +E++I+DL+  TFQ++WFSE
Sbjct: 1226 DKGISVRKRVVKTLNEICLNHMQHPKIPYLCRVLVTR---VSDEESIKDLVLKTFQDLWFSE 1284          
BLAST of mRNA_E-fasciculatus_F_contig14356.3169.1 vs. uniprot
Match: A0A8J4PQY8_9MYCE (Sister chromatid cohesion protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PQY8_9MYCE)

HSP 1 Score: 62.0 bits (149), Expect = 7.040e-9
Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 DKGVSVRKSVVRTLRGVLLWRSSHPRHTAICRALVERAVVVREEDTIRDLIRDTFQEIWFSE 62
            DKG+SVRK VV+TL  + L + +HP+   IC+ LV R   + ++D IRDL   TFQ++WFS+
Sbjct: 1139 DKGISVRKRVVKTLHDICLAQPNHPKIPEICKVLVTR---ITDDDAIRDLALKTFQDLWFSD 1197          
BLAST of mRNA_E-fasciculatus_F_contig14356.3169.1 vs. uniprot
Match: D3BQJ3_POLPP (Sister chromatid cohesion protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BQJ3_POLPP)

HSP 1 Score: 58.9 bits (141), Expect = 8.460e-8
Identity = 27/62 (43.55%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 DKGVSVRKSVVRTLRGVLLWRSSHPRHTAICRALVERAVVVREEDTIRDLIRDTFQEIWFSE 62
            DKG+SVRK VV+TL  V L +  HP+   +C+ LV R   + ++++IR+L+ +TF+++WF E
Sbjct: 1121 DKGISVRKRVVKTLHDVCLSQIQHPKIPQLCKVLVSR---INDDESIRELVINTFKDLWFGE 1179          
BLAST of mRNA_E-fasciculatus_F_contig14356.3169.1 vs. uniprot
Match: UPI0006447CFC (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006447CFC)

HSP 1 Score: 57.4 bits (137), Expect = 2.940e-7
Identity = 28/64 (43.75%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    1 DKGVSVRKSVVRTLRGVLLWRSSHPRHTAICRALVERAVVVREEDTIRDLIRDTFQEIWFSEED 64
            DKG+SVRK VV+TL  V L    HP+   IC+ LV R   + +E++I++L+  TF+++WF + D
Sbjct: 1189 DKGISVRKRVVKTLHDVCLAHIQHPKIPYICKILVGR---ISDEESIKELVVQTFKDLWFGDHD 1249          
BLAST of mRNA_E-fasciculatus_F_contig14356.3169.1 vs. uniprot
Match: W7TH99_9STRA (Sister chromatid cohesion protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TH99_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.580e-6
Identity = 23/39 (58.97%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   23 SHPRHTAICRALVERAVVVREEDTIRDLIRDTFQEIWFS 61
            +HP  T ICR LV RA +V+EEDT++DL++D+FQ +WFS
Sbjct:  801 THPLRTEICRRLVGRASMVKEEDTVKDLVQDSFQAMWFS 839          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14356.3169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2V2_9STRA2.170e-1769.35Sister chromatid cohesion protein n=1 Tax=Tribonem... [more]
A0A7R9UFA3_9STRA7.810e-1047.06Sister chromatid cohesion protein n=1 Tax=Pinguioc... [more]
A0A7S2RVL6_9STRA2.020e-954.84Sister chromatid cohesion protein n=2 Tax=labyrint... [more]
A0A151ZH98_9MYCE2.020e-950.00Sister chromatid cohesion protein n=1 Tax=Tieghemo... [more]
F1A4K5_DICPU3.780e-950.00Sister chromatid cohesion protein n=1 Tax=Dictyost... [more]
Q54RK7_DICDI5.160e-950.00Sister chromatid cohesion protein n=1 Tax=Dictyost... [more]
A0A8J4PQY8_9MYCE7.040e-948.39Sister chromatid cohesion protein n=1 Tax=Polyspho... [more]
D3BQJ3_POLPP8.460e-843.55Sister chromatid cohesion protein n=1 Tax=Polyspho... [more]
UPI0006447CFC2.940e-743.75hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
W7TH99_9STRA2.580e-658.97Sister chromatid cohesion protein n=2 Tax=Monodops... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21704:SF18NIPPED-B-LIKE PROTEINcoord: 1..81
IPR033031SCC2/Nipped-B familyPANTHERPTHR21704NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATEDcoord: 1..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14356contigE-fasciculatus_F_contig14356:930..1969 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14356.3169.1mRNA_E-fasciculatus_F_contig14356.3169.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14356 930..1969 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14356.3169.1 ID=prot_E-fasciculatus_F_contig14356.3169.1|Name=mRNA_E-fasciculatus_F_contig14356.3169.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=110bp
DKGVSVRKSVVRTLRGVLLWRSSHPRHTAICRALVERAVVVREEDTIRDL
IRDTFQEIWFSEEDDGAALSLLPAATSTSTSKETASSSLARSSPSKGRSM
GRASGAAAAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033031SCC2/Nipped-B