mRNA_E-fasciculatus_F_contig14320.3149.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14320.3149.1 vs. uniprot
Match: D7FJS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS1_ECTSI) HSP 1 Score: 308 bits (790), Expect = 6.150e-104 Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 1
Query: 4 QISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSVGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 465
+ISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKS+GRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR
Sbjct: 159 KISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 312
BLAST of mRNA_E-fasciculatus_F_contig14320.3149.1 vs. uniprot
Match: A0A835YIP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIP3_9STRA) HSP 1 Score: 195 bits (495), Expect = 4.150e-59 Identity = 91/154 (59.09%), Postives = 116/154 (75.32%), Query Frame = 1
Query: 4 QISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSVGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 465
+I+HHF+GR+I + +GCVVFTSS AY P PF MYGATKAFL+N A SL+ EVRCKG+DVLS+HPSPVA+ FYS LDH I++MDKA AV + LP+ I KSVGRVVWR++G AV +R+ +L NFL + ++ P+LPDYK +DV R
Sbjct: 165 RITHHFLGRLIAARLRGCVVFTSSAVAYMPAPFCVMYGATKAFLTNFAGSLAAEVRCKGVDVLSIHPSPVATAFYSGLDHRIDMMDKAARGAVAASTLPKVIFKSVGRVVWREVGAPAVIMRLSASLLPGNFLYWSSAVAAPFLPDYKTHDVNR 318
BLAST of mRNA_E-fasciculatus_F_contig14320.3149.1 vs. uniprot
Match: A0A7S1YAC6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YAC6_9STRA) HSP 1 Score: 186 bits (473), Expect = 4.670e-58 Identity = 90/145 (62.07%), Postives = 110/145 (75.86%), Query Frame = 1
Query: 31 MIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSVGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 465
M+ EK KGC+VFTSSVAA+ PTPF+AMY +TKAF+S AASL +EV GIDV +VHPSPVAS FY +DH I+L++ A +SAVPP+VLP EI KSVG RDIGGMAVG R+GT L +NF FS+ P+LPDYKK++ R
Sbjct: 1 MVSEKTKGCIVFTSSVAAFIPTPFAAMYASTKAFVSQFAASLHIEVSNLGIDVCAVHPSPVASNFYDKVDHKIDLLEAAAKSAVPPDVLPNEIFKSVGACALRDIGGMAVGTRMGTFFLPFNFFTELFSVAAPFLPDYKKHNTTR 145
BLAST of mRNA_E-fasciculatus_F_contig14320.3149.1 vs. uniprot
Match: A0A7S1BQP0_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQP0_9STRA) HSP 1 Score: 192 bits (489), Expect = 7.500e-58 Identity = 90/153 (58.82%), Postives = 115/153 (75.16%), Query Frame = 1
Query: 7 ISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSVGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 465
I+HHFV +MI +K KGC+VFTSSVA + PTPF+AMY +TKAF+S A+S+ VE+ GIDV +VHPSPV+S FY +DH IELM+ A++SAVPP LP +IL+S+GR RD+G MA G R+GT L YNF AF+M PYLPDYK ++ R
Sbjct: 199 ITHHFVKKMISQKLKGCIVFTSSVAGFIPTPFAAMYSSTKAFVSQFASSIHVELANSGIDVCAVHPSPVSSNFYDKVDHKIELMEAAQKSAVPPQDLPNDILRSIGRCALRDLGSMAWGTRMGTWFLPYNFFTVAFTMAAPYLPDYKNHNANR 351
BLAST of mRNA_E-fasciculatus_F_contig14320.3149.1 vs. uniprot
Match: A0A7R9WZI5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZI5_9STRA) HSP 1 Score: 188 bits (478), Expect = 2.210e-56 Identity = 86/154 (55.84%), Postives = 115/154 (74.68%), Query Frame = 1
Query: 4 QISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSVGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 465
QI+HHFVG+++ +K +GCVVFTSSVA Y PTPFS+ YGATKAF+S LA L +E++ GIDV +V+PSPVAS FY+ LDH I+L++ A++ AV P+ LP E+ KS+G RD+GGMA+G R+GT ++YNF F+ PYLPDYK + R
Sbjct: 182 QITHHFVGKLVSKKSRGCVVFTSSVAGYVPTPFSSSYGATKAFISQLACCLHIELKSLGIDVCAVNPSPVASNFYAKLDHKIDLLESARKQAVTPDALPDEMFKSIGMCALRDVGGMALGTRMGTFFIAYNFFTGIFAAAAPYLPDYKTHSKTR 335
BLAST of mRNA_E-fasciculatus_F_contig14320.3149.1 vs. uniprot
Match: A0A6U3RQK4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RQK4_9STRA) HSP 1 Score: 183 bits (465), Expect = 9.470e-56 Identity = 84/155 (54.19%), Postives = 115/155 (74.19%), Query Frame = 1
Query: 1 MQISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSVGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 465
+ I+HHF+ M+ +K KGC+V+TSSVA + PTPF+AMY +TKAF+S +A+ L +EV+ GIDV ++HPSPVAS FY +DH IELM+ A++SAVPP LP +I +S+G RD+GGMA G R+GT L YNF F++ P+LPDYKK++ R
Sbjct: 74 VNITHHFLSIMVAKKLKGCIVYTSSVAGFIPTPFAAMYASTKAFVSQMASCLHIEVQNLGIDVCAIHPSPVASNFYDKVDHKIELMEAAQKSAVPPQDLPNDIFRSIGACALRDLGGMAWGTRMGTFFLPYNFFTELFTVAAPFLPDYKKHNQTR 228
BLAST of mRNA_E-fasciculatus_F_contig14320.3149.1 vs. uniprot
Match: A0A7R9ZAP0_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9ZAP0_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.460e-55 Identity = 88/155 (56.77%), Postives = 113/155 (72.90%), Query Frame = 1
Query: 1 MQISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSVGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 465
+ I+HHFV M+ +K KGC+VFTSSVA + PTPF+AMY +TKAFLS A SL +EV+ GIDV ++HPSPVAS FY +DH IELM+ A++SAVPP LP +IL+S+G RD+GGMA R+GT L YNF F+ P+LPDYKK++ R
Sbjct: 187 VNITHHFVQVMVSKKLKGCIVFTSSVAGFIPTPFAAMYASTKAFLSQFACSLHIEVQNLGIDVCAIHPSPVASNFYDKVDHKIELMEAAQKSAVPPQQLPNDILRSIGACALRDLGGMAWSTRMGTFFLPYNFFTEMFTAAAPFLPDYKKHNKSR 341
BLAST of mRNA_E-fasciculatus_F_contig14320.3149.1 vs. uniprot
Match: A0A6V1NV24_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NV24_HETAK) HSP 1 Score: 185 bits (470), Expect = 1.890e-55 Identity = 92/153 (60.13%), Postives = 117/153 (76.47%), Query Frame = 1
Query: 7 ISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSVGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 465
I+HHF+ R++ E ++GC+VFTSSV AY P PFS YGATKAFLS+ A+SL++E R KGIDV SVHPSPVAS+FY N H +E+MD AK+ A P+ P +ILKSVGR V RD+GG AVG+RV T ++S NFLA+AF+ +LPD+KK V R
Sbjct: 161 ITHHFLSRLVSEGKRGCIVFTSSVVAYMPAPFSVTYGATKAFLSSFASSLAIENREKGIDVCSVHPSPVASRFYDNT-HKMEMMDFAKKGAASPDAYPDQILKSVGRCVLRDVGGFAVGMRVVTCLMSENFLASAFAAAARFLPDFKKYSVDR 312
BLAST of mRNA_E-fasciculatus_F_contig14320.3149.1 vs. uniprot
Match: A0A7S2I2H6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2H6_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.650e-54 Identity = 86/155 (55.48%), Postives = 114/155 (73.55%), Query Frame = 1
Query: 1 MQISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSVGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 465
+ I+HHF+ M+ +K KGCVV+TSSVA + PTPF+AMY +TKAFLS +A L +EV+ GIDV +VHPSPVAS FY +DH IELM+ A++SAVPP LP +I +S+G RD+GGMA G R+GT L +NF F++ P+LPDYKK++ R
Sbjct: 174 VNITHHFLSIMVAKKWKGCVVYTSSVAGFIPTPFAAMYASTKAFLSQMACCLHIEVQNLGIDVCAVHPSPVASNFYDKVDHKIELMEAAQKSAVPPQDLPNDIFRSIGACALRDLGGMAWGTRMGTFFLPFNFFTEMFTVAAPFLPDYKKHNQTR 328
BLAST of mRNA_E-fasciculatus_F_contig14320.3149.1 vs. uniprot
Match: A0A7S0UI44_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UI44_9STRA) HSP 1 Score: 182 bits (463), Expect = 3.120e-54 Identity = 85/155 (54.84%), Postives = 113/155 (72.90%), Query Frame = 1
Query: 1 MQISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSVGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 465
+ ISHHF +++ K+KGC+VFTSSVA + PTPFS MYGATKAF+S LA SL +E++ GIDV +VHPSPVAS FY++LDH I++++ A + AVPP LP +I +S+G RD+GGMAV R+GT L YNF F+ PYLPD+K ++ R
Sbjct: 172 VNISHHFASKLVSAKKKGCIVFTSSVAGFIPTPFSGMYGATKAFVSQLACSLHIELQSLGIDVCAVHPSPVASNFYNDLDHKIDILESACKQAVPPEDLPDDIFRSIGCCALRDLGGMAVSSRMGTFFLPYNFFTEMFAAAAPYLPDWKTHNKTR 326 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14320.3149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14320.3149.1 >prot_E-fasciculatus_F_contig14320.3149.1 ID=prot_E-fasciculatus_F_contig14320.3149.1|Name=mRNA_E-fasciculatus_F_contig14320.3149.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=156bp MQISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAAback to top mRNA from alignment at E-fasciculatus_F_contig14320:256..1367+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14320.3149.1 ID=mRNA_E-fasciculatus_F_contig14320.3149.1|Name=mRNA_E-fasciculatus_F_contig14320.3149.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1112bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14320:256..1367+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14320:256..1367+ >mRNA_E-fasciculatus_F_contig14320.3149.1 ID=mRNA_E-fasciculatus_F_contig14320.3149.1|Name=mRNA_E-fasciculatus_F_contig14320.3149.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=936bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14320:256..1367+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |