prot_E-fasciculatus_F_contig14206.3075.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14206.3075.1
Unique Nameprot_E-fasciculatus_F_contig14206.3075.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length120
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14206.3075.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.940e-43
Identity = 92/121 (76.03%), Postives = 102/121 (84.30%), Query Frame = 0 
Query:    1 MSAIEDSKVEGGVEASVVSEPASPKGADGPSATSAVSTGSGVNGPEDVKVEDETDGAEAEEFEERSDLTRMEEGKI--GAKAAGGSEVSPPEGTRLPPATHALSATLPVSGPDDAKGEDGL 119
            MSAIEDSKV+GGVEASVVSEPASPKGADGPS TSA+STGS + GP DVK+EDETDGA+A+E E+ S+L RME+GKI  G+KAAGGSEVSPPEGT LPPATH LS    V G DDAK ED L
Sbjct:  774 MSAIEDSKVDGGVEASVVSEPASPKGADGPSVTSALSTGSVIRGPGDVKLEDETDGADADELEQGSELMRMEDGKIEDGSKAAGGSEVSPPEGTHLPPATHPLSTMSTVGGSDDAKVEDDL 894
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14206.3075.1 vs. uniprot
Match: A0A6H5JJ93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ93_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.490e-24
Identity = 64/88 (72.73%), Postives = 72/88 (81.82%), Query Frame = 0 
Query:    1 MSAIEDSKVEGGVEASVVSEPASPKGADGPSATSAVSTGSGVNGPEDVKVEDETDGAEAEEFEERSDLTRMEEGKI--GAKAAGGSEV 86
            MSA+EDSKV  G EASV SE ASP G DGPSATSAVSTGS +  P DV+VEDETDG EA+EFE+ SDLTRME+G +  G+KAAGGSEV
Sbjct:  427 MSAVEDSKVGDGAEASVTSEAASPHGEDGPSATSAVSTGSEIRSPGDVQVEDETDGVEADEFEQGSDLTRMEDGVVEDGSKAAGGSEV 514
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14206.3075.1 vs. uniprot
Match: A0A6H5JL60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL60_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 9.560e-20
Identity = 60/81 (74.07%), Postives = 63/81 (77.78%), Query Frame = 0 
Query:    8 KVEGGVEASVVSEPASPKGADGPSATSAVSTGSGVNGPEDVKVEDETDGAEAEEFEERSDLTRMEEGKI--GAKAAGGSEV 86
            KVEGGVEASV SE ASPKGADGPSATS V+ GS    P DVK+EDETDG EA EF   SDLTR E+G I  GAKAAGGSEV
Sbjct:  346 KVEGGVEASVTSEAASPKGADGPSATSVVA-GSVARSPGDVKLEDETDGVEAGEFVHESDLTRTEDGNIEDGAKAAGGSEV 425
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14206.3075.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBY3_ECTSI1.940e-4376.03Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JJ93_9PHAE1.490e-2472.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL60_9PHAE9.560e-2074.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14206contigE-fasciculatus_F_contig14206:430..789 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14206.3075.1mRNA_E-fasciculatus_F_contig14206.3075.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14206 333..962 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14206.3075.1 ID=prot_E-fasciculatus_F_contig14206.3075.1|Name=mRNA_E-fasciculatus_F_contig14206.3075.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=120bp
MSAIEDSKVEGGVEASVVSEPASPKGADGPSATSAVSTGSGVNGPEDVKV
EDETDGAEAEEFEERSDLTRMEEGKIGAKAAGGSEVSPPEGTRLPPATHA
LSATLPVSGPDDAKGEDGL*
back to top