mRNA_E-fasciculatus_F_contig14204.3074.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14204.3074.1
Unique NamemRNA_E-fasciculatus_F_contig14204.3074.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14204.3074.1 vs. uniprot
Match: A0A6H5KPW4_9PHAE (Tyrosinase_Cu-bd domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPW4_9PHAE)

HSP 1 Score: 554 bits (1427), Expect = 2.290e-191
Identity = 282/333 (84.68%), Postives = 295/333 (88.59%), Query Frame = 1
Query:    1 QKRYSDSAAGGGIRK--ERPGSLQLRATNEYGEYDAEALALYGLDMVVEPHRATRITVSSRPGRRLPPSENAEISEN--------SPP----SSRRYYWLLVRADPSGAPLDDVTPLVDTKSAGPLATVTLTDAGEKYALLVQQVAADGSLIAEARVTITCKYVRRELRGLTAEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNSPDYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLDAAHLGTEWPSSEIFSPDMFGSALGSPENQFQISDGWFSNITSLYDPWGEILTPAESFVTTSRNSYGFVDGLYNFQV 957
            ++RYS S+AGGG  +  E PG L+L+ATNEYGEYD  ALALYGL+MVVEPHRATRITVSS   RRLPPSEN+E+           SPP    S RRYYWLLVRAD SGAPLD VTPLVDTK AGPLATVTLTDAGEKYALLVQQV ADGSLIAEARVTITCKYVRRELR LT EDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNSPDYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYML+AAHLGTEWPSSEIFSPDMFGSALGSP NQFQISDGWFSNITSLYDP G+ILTPAESF+TTS NSYGFVDG+YNFQ 
Sbjct:  108 EERYSGSSAGGGGGRGEEGPGRLELKATNEYGEYDRGALALYGLEMVVEPHRATRITVSSSRPRRLPPSENSEVXXXXXXXXXXPSPPLSSSSPRRYYWLLVRADRSGAPLDGVTPLVDTKVAGPLATVTLTDAGEKYALLVQQVEADGSLIAEARVTITCKYVRRELRSLTGEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNSPDYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLEAAHLGTEWPSSEIFSPDMFGSALGSPVNQFQISDGWFSNITSLYDPRGDILTPAESFITTSHNSYGFVDGVYNFQA 440          
BLAST of mRNA_E-fasciculatus_F_contig14204.3074.1 vs. uniprot
Match: A0A6H5KMG1_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMG1_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 2.740e-148
Identity = 226/306 (73.86%), Postives = 251/306 (82.03%), Query Frame = 1
Query:   64 QLRATNEYGEYDAEALALYGLDMVVEPHRATRITVSSRPGRRLPPSENAEISENSPPSS--------RRYYWLLVRADPSGAPLDDVTPLVDTKSAGPLATVTLTDAGEKYALLVQQVAAD-GSLIAEARVTITCKYVRRELRGLTAEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNSPDYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLDAAHLGTEWPSSEIFSPDMFGSALGSPENQFQISDGWFSNITSLYDPWGEILTPAESFVTTSRNSYGFVDGLYNFQ 954
            ++ ATNEYGEYD EALALYGL+MVVEPHRATRITVSSR    LP SE +E SE SP  S            WLLVRAD SGA LDDVTPLVD +      TVTLTDAGEKYALLVQQV  D G+++AE RVTI+CKYVRRELRGLT  DRTGFFAAMREFYTVSLEEGR  YG+GF +AK +AAYHN+ DYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYML+AAHLGTEW  SEIF PDMFGSALGSP+NQFQISDGWFSNI+S+YDP G++L+ AE+ ++T+ N YGFV   YN+Q
Sbjct:   21 EVNATNEYGEYDGEALALYGLEMVVEPHRATRITVSSR----LPLSEISEKSEKSPSPSPXXXXXXXXXXXWLLVRADSSGAALDDVTPLVDARGYDRFVTVTLTDAGEKYALLVQQVEGDDGTVVAEQRVTISCKYVRRELRGLTIADRTGFFAAMREFYTVSLEEGRALYGDGFYDAKLMAAYHNTRDYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLEAAHLGTEWGDSEIFGPDMFGSALGSPDNQFQISDGWFSNISSVYDPAGDLLS-AEADISTNHNPYGFVGSTYNYQ 321          
BLAST of mRNA_E-fasciculatus_F_contig14204.3074.1 vs. uniprot
Match: D7FVH6_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVH6_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 1.100e-88
Identity = 154/311 (49.52%), Postives = 204/311 (65.59%), Query Frame = 1
Query:   61 LQLRATNEYGEYDAEALALYGLDMVVEPHRATRITVSSRPGRRLPPSENAEISENSPPSSRRYYWLLVRAD---PSGAPLDDVTPLVDTKSAGPLATVTLTDAGEKYALLVQQ--VAADGS-------LIAEARVTITCKYVRRELRGLTAEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNSPDYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLDAAHLGTEWPSSEIFSPDMFGSALGSPENQFQISDGWFSNITSLYDPWGEILTPAESFVTTSRNSYGFVDGLYNFQV 957
            L L ATNEYGEYD  ALALYG DM+VEP++ T I+V+       P S +  IS         Y WLLVR D   P    L+ V    D   +G    VTLT+AG  YAL VQQ  +A +G        +++E  + + CK+VRRELR LT+ DRT FF+AMREFYTV+LE G++KYG+ F+N+K ++ YHN+ +YCFH+GMHFLNAHA+FDLW E +LQ IDP V++  WD+ +DAA LG +W  S IFS DM+GSALGSP+N +QIS+GWF+++ S+YDP    L   +  +    + YG++D  YN Q 
Sbjct:  116 LTLVATNEYGEYDRGALALYGFDMLVEPYKKTTISVTG------PASSSGSIS---------YSWLLVREDDDEPEAVELEVVEQ--DDTPSGSSVKVTLTEAGATYALHVQQQQLAPEGGGDASVAVVVSEKTIQVACKHVRRELRDLTSADRTAFFSAMREFYTVNLEAGKEKYGKTFANSKIISTYHNTRNYCFHSGMHFLNAHASFDLWAERSLQMIDPTVAMHYWDFTIDAATLGPDWADSVIFSNDMYGSALGSPDNGYQISEGWFADVKSIYDPDETFL---KEQINPGYSLYGYIDARYNIQA 406          
BLAST of mRNA_E-fasciculatus_F_contig14204.3074.1 vs. uniprot
Match: D7FP10_ECTSI (TYRosinase family member (Tyr-3) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP10_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 1.260e-71
Identity = 130/302 (43.05%), Postives = 183/302 (60.60%), Query Frame = 1
Query:   61 LQLRATNEYGEYDAEALALYGLDMVVEPHRATRITVSSRPGRRLPPSENAEISENSPPSSRRYYWLLVRADPSGAPLDDVTP--LVDTKSAGPLATVTLTDAGEKYALLVQQVAADGSLIAEARVTITCKYVRRELRGLTAEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNSP--DYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLDAAHLGTEWPSSEIFSPDMFGSALGSPENQFQISDGWFSNITSLYDPWGEILTPAESFVTTSRNSYGFVDGLYNFQ 954
            L+LRATNEYGEYD  +L +YGLDMV+EP R+T +T                +  +SP  +  Y W L  AD  GAP +  T     +  +  P  TV L   G  Y L V+ V  +G +I E    ++CKYVRRE+R LT  DR  F  AM  +YT+  + G+D+YG  FSN + + AYHN+   ++C+H G+ FL +HAAFDL +E  LQ IDP VSLP WD+M+D+A LG EW +S +F  D FGSA GS EN + I +  F N++++YDP G ++   +S +++  N+YG+V   +N+Q
Sbjct:   20 LKLRATNEYGEYDKASLKMYGLDMVIEPFRSTTVTAEG-------------MLIDSP--AHMYVWRLRYADQEGAPQNSGTAGDAWNCTTGKPQVTVELERPGTAYFLSVESVDENGRVITEGNSKVSCKYVRREIRDLTDRDREAFLDAMLIWYTLPTDVGKDRYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASLGHEWYNSVVFDNDWFGSAFGSQENGYAIPESRFGNVSTIYDPDGTLV---DSRISSYHNAYGYVTSAFNYQ 303          
BLAST of mRNA_E-fasciculatus_F_contig14204.3074.1 vs. uniprot
Match: D7G530_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G530_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 1.810e-68
Identity = 128/284 (45.07%), Postives = 167/284 (58.80%), Query Frame = 1
Query:  109 LALYGLDMVVEPHRATRITVSSRPGRRLPPSENAEISENSPPSSRRYYWLLVRADPSGAPLDDVTPLVDTKSAGPLATVTLTDAGEKYALLVQQVAADGSLIAEARVTITCKYVRRELRGLTAEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNSP--DYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLDAAHLGTEWPSSEIFSPDMFGSALGSPENQFQISDGWFSNITSLYDPWGEILTPAESFVTTSRNSYGFVDGLYNFQ 954
            L  YGLDMV+EP R T + V           E   +S      S RY W L  A   G  ++D   L    S GP ATVTL   G  Y L V++V+ DG ++AE RV  +CKYVRRE+R LT  DR  F  AM  +YT+  + G+ KYG  +SN   +AA H +   ++C+H GM FL +HAAFDL VE  LQ IDP VSLP WDYM+D+A LG EW  S +F PD FGSA+G  EN F ++ G F N++++YDP     T  +S VT + N YG++   +N+Q
Sbjct:   10 LETYGLDMVIEPFRETTLAV-----------EGTNVS-----LSGRYSWRLQHASEQGITVEDDGDLW-AHSGGPQATVTLDSPGTVYVLTVREVSEDGQVVAEGRVKASCKYVRREIRDLTDGDREAFLDAMETWYTLPTDAGKAKYGPNYSNYMSIAAIHGTDYKNFCYHQGMQFLTSHAAFDLIVERYLQMIDPTVSLPVWDYMIDSALLGLEWYDSVMFQPDWFGSAMGDVENHFMVTGGRFGNVSAIYDP---DYTLTDSRVTPTHNPYGYLSSSHNYQ 273          
BLAST of mRNA_E-fasciculatus_F_contig14204.3074.1 vs. uniprot
Match: D7FSG6_ECTSI (Common central domain of tyrosinase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG6_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 1.270e-50
Identity = 113/302 (37.42%), Postives = 164/302 (54.30%), Query Frame = 1
Query:  130 MVVEPHRATRITVSSRP-----GRRLPPSENAEI---SENSPPSSRRYYWLLVR-ADPSGAPLDDVTPLVDTKSAGPLATVTLTDAGEKYALLVQQ------VAADGSL---------IAEARVTITCKYVRRELRGLTAEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNSP--DYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLDAAHLGTEWPSSEIFSPDMFGSALGSPENQFQISDGWFSNITSLYDPWGEILTPAESF-VTTSRNSYGFVDGLYNFQ 954
            MV EPHR T +T +S       G          +   ++    S   + W +V   +  G P      + + +      +V  T  G  Y L V++      V+ DG++         I  A + ++CK+VRRELR L+  DR  F  AM  +Y VS E+GR KYGEGF + + +A+YH++    +C+H G+ FL AHAAF L +E +LQKI+P+VSLP WDYM++A  LG +W  S IF  DMFG A+GS +N +QISDG F  I+++YDP   +  P     +    N+YGF+   YN+Q
Sbjct:    1 MVAEPHRPTTLTATSSVALGGGGXXXXXXXXXXVRGGADTESGSLSVFSWKVVELGEEEGGP---AATIFEEEEGRAEVSVEFTKPGGVYLLTVEERLRAGAVSRDGTVVLNAGETAVIGRATIKVSCKHVRRELRDLSEADREAFLDAMEAYYAVSKEDGRAKYGEGFFDYQLLASYHSADLKSFCYHAGVQFLTAHAAFGLMLERSLQKINPRVSLPFWDYMIEAETLGPDWQDSPIFDDDMFGRAMGSADNGYQISDGRFGKISAIYDPHHNL--PGNGLDIGPHHNAYGFLSATYNYQ 297          
BLAST of mRNA_E-fasciculatus_F_contig14204.3074.1 vs. uniprot
Match: A0A6H5JD30_9PHAE (Tyrosinase_Cu-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD30_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 1.310e-47
Identity = 81/170 (47.65%), Postives = 114/170 (67.06%), Query Frame = 1
Query:  451 RRELRGLTAEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNSP--DYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLDAAHLGTEWPSSEIFSPDMFGSALGSPENQFQISDGWFSNITSLYDPWGEILTPAESFVTTSRNSYGFVDGLYNFQ 954
            RRE+R LT  DR  F  AM+ +YTV  + G+ +YG  FSN + + AYHN+   ++C+H G+ FL +HAAFDL +E  LQ IDP VSLP WD+M D+A LG EW +S +F  D FGSA GSPEN + IS+  F N+++++DP G ++   +S +    N+YG+V   YN+Q
Sbjct:   13 RREIRDLTERDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQAITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMTDSASLGHEWYNSVVFDNDWFGSAFGSPENGYAISESRFGNVSTIFDPDGTLV---DSRIGPYHNAYGYVTSAYNYQ 179          
BLAST of mRNA_E-fasciculatus_F_contig14204.3074.1 vs. uniprot
Match: D8LM86_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM86_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 4.140e-46
Identity = 116/324 (35.80%), Postives = 154/324 (47.53%), Query Frame = 1
Query:  109 LALYGLDMVVEPHRATRITVSSRPGRRLPPSENAEISENSPPSSRRYYWLLVRADPSGAPLDDV----------TPLVDTKSAGPLATVTLTDAGE--------------KYA-----------LLVQQVAADGSLIAEAR-----VTITCKYVRRELRGLTAEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNSP--DYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLDAAHLGTEWPSSEIFSPDMFGSALGSPENQFQISDGWFSNITSLYDPWGEILTPAESFVTTSRNSYGFVDGLYNFQ 954
            L  YGLDMV+EP R T + V                 E +   SRRY W L      G    D              V   S G +  +T+ +  E              KY            L V +  A G  +   +     + ++C   RRE+R LT  DR  FF AM+ +YT+    G+  YG  FSN   V A H +   ++C+H GM FL +HAAFDL +E  LQ IDP VSLP WDYM+D+A LG EW  SEIF PD FGSA+   EN F ++ G F N++++YDP     T  +S V  + N YG+V   +N+Q
Sbjct:   10 LGTYGLDMVIEPFRKTTLAV-----------------EGNVSLSRRYVWQLQHGSNHGVTAKDAGDAWAYTGGPQATVTLDSPGTVYVLTVREVSEDGQVVAEARVEASCKYVRRFPLGACVQYLRVWRPFASGQPLTRPQHVPPLLLVSCD--RREIRELTDRDREAFFDAMQTWYTIPNSVGKTTYGPDFSNYMPVTAIHGTEVQNFCYHQGMQFLTSHAAFDLTMERYLQMIDPTVSLPVWDYMIDSAWLGLEWYESEIFQPDWFGSAMSDVENHFMVTGGRFGNVSAIYDPED---TLTDSRVKPTHNPYGYVSSPHNYQ 311          
BLAST of mRNA_E-fasciculatus_F_contig14204.3074.1 vs. uniprot
Match: A0A6H5JZF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF0_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 5.120e-34
Identity = 84/198 (42.42%), Postives = 112/198 (56.57%), Query Frame = 1
Query:   28 GGGIRKERPGSLQLRATNEYGEYDAEALALYGLDMVVEPHRATRITVSSRPGRRLPPSENAEISENSPPSSRRYYWLLVRADPSGAPLDDVTPLVDTK-------SAGPLATVTLTDAGEKYALLVQQVAADGSLIAEARVTITCKYVRRELRGLTAEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNS 600
            G  +R +    L L ATNEYGEYD  ALALYG DM+VEP++ T I+V+              ++ +S   S  Y WLLVR D      DD    VD +        +G    VTL +AG  Y+L V                 TC++VRRELR LT+EDRT FF+AMR+FYTV+LE G++KYG+ F+N+K ++ YH+S
Sbjct:    6 GRSVRGDSSSGLTLVATNEYGEYDRGALALYGFDMLVEPYKKTTISVTG-------------LASSS--GSTSYTWLLVRED------DDEPEAVDLEVVEQNDAPSGSSVNVTLIEAGATYSLRV-----------------TCRHVRRELRDLTSEDRTAFFSAMRKFYTVNLEAGKEKYGKTFANSKIMSTYHHS 165          
BLAST of mRNA_E-fasciculatus_F_contig14204.3074.1 vs. uniprot
Match: F0YI85_AURAN (Tyrosinase_Cu-bd domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI85_AURAN)

HSP 1 Score: 135 bits (339), Expect = 1.550e-31
Identity = 103/311 (33.12%), Postives = 147/311 (47.27%), Query Frame = 1
Query:  112 ALYGLDMVVEPHRATRI-----------------------TVSSRPGRRLPPSENAEISENSPPSSRRYYWLLVRADPSGAPLDDVTPLVDTKSAGPLATVTLTDAGEKYALLVQ-----QVAADGSLIAEARV-TITCKYVRRELRGLTAEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNSPDYC--FHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLDAAHLGTEWPSSEIFSPDMFGSAL-GSPENQFQISDGWFSNITSLYDPWGEILTPAESFVTTSRNSYGFVDGLYN 948
            +LY  D +VEPH+ T I                       T      RR+    N     N+ P+ R  + +L    P  AP      L+     G    +  T   + Y L ++     QVA D     +  V T+ CKYVRRE+R +T++D+  +  AMR   T  L+EGR ++G  F+N ++ A  H   + C  FH G+ F+ +HAAF L +E  LQ +D +V+ P WDY LDAA LGT+W S+ +FS D FGSA  G P+N           + S +  + E+  P  +F    RNSYG V    N
Sbjct:  319 SLYPWDYIVEPHKTTTIRFRDACDGDGHLLDNTRTPVWSVTFQGTDTRRV----NRGAGGNASPA-RAQHRMLSDLAPEIAP----QVLISRSERGCDVDLNFTHVSQIYDLTIELPNSRQVAVDTLTDVDTYVATLMCKYVRREMRAVTSDDKNRYLEAMRIVSTTPLDEGRRRFGSKFANLEYFAVKHIHTEECSPFHGGLSFITSHAAFTLELEQALQSVDARVTQPYWDYTLDAALLGTDWDSAAVFSNDWFGSAHPGGPDN----------TVASTF--FQEVPVPT-NFSRPVRNSYGRVTSTIN 607          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14204.3074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPW4_9PHAE2.290e-19184.68Tyrosinase_Cu-bd domain-containing protein n=2 Tax... [more]
A0A6H5KMG1_9PHAE2.740e-14873.86TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
D7FVH6_ECTSI1.100e-8849.52N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVH6_ECT... [more]
D7FP10_ECTSI1.260e-7143.05TYRosinase family member (Tyr-3) n=1 Tax=Ectocarpu... [more]
D7G530_ECTSI1.810e-6845.07Hypothetical tyrosinase-like protein F21C3.2 in ch... [more]
D7FSG6_ECTSI1.270e-5037.42Common central domain of tyrosinase family protein... [more]
A0A6H5JD30_9PHAE1.310e-4747.65Tyrosinase_Cu-bd domain-containing protein n=1 Tax... [more]
D8LM86_ECTSI4.140e-4635.80Hypothetical tyrosinase-like protein F21C3.2 in ch... [more]
A0A6H5JZF0_9PHAE5.120e-3442.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YI85_AURAN1.550e-3133.12Tyrosinase_Cu-bd domain-containing protein n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14204contigE-fasciculatus_F_contig14204:79..2313 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score243.0
Seed ortholog evalue1.8e-61
Seed eggNOG ortholog2880.D7FP10
EggNOG free text desc.Common central domain of tyrosinase
EggNOG OGs2D2GE@1,2SMT5@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTyrosinase copper-binding domain
Ec32 orthologEc-04_000730.1
Exons3
Model size963
Cds size963
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14204.3074.1prot_E-fasciculatus_F_contig14204.3074.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14204 79..2313 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927910.9621167-CDS-E-fasciculatus_F_contig14204:78..2921622927910.9621167-CDS-E-fasciculatus_F_contig14204:78..292Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14204 79..292 -
1695995748.224928-CDS-E-fasciculatus_F_contig14204:78..2921695995748.224928-CDS-E-fasciculatus_F_contig14204:78..292Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14204 79..292 -
1622927910.9771564-CDS-E-fasciculatus_F_contig14204:914..10601622927910.9771564-CDS-E-fasciculatus_F_contig14204:914..1060Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14204 915..1060 -
1695995748.2355223-CDS-E-fasciculatus_F_contig14204:914..10601695995748.2355223-CDS-E-fasciculatus_F_contig14204:914..1060Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14204 915..1060 -
1622927910.991077-CDS-E-fasciculatus_F_contig14204:1710..23131622927910.991077-CDS-E-fasciculatus_F_contig14204:1710..2313Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14204 1711..2313 -
1695995748.2454612-CDS-E-fasciculatus_F_contig14204:1710..23131695995748.2454612-CDS-E-fasciculatus_F_contig14204:1710..2313Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14204 1711..2313 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14204.3074.1

>prot_E-fasciculatus_F_contig14204.3074.1 ID=prot_E-fasciculatus_F_contig14204.3074.1|Name=mRNA_E-fasciculatus_F_contig14204.3074.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=321bp
QKRYSDSAAGGGIRKERPGSLQLRATNEYGEYDAEALALYGLDMVVEPHR
ATRITVSSRPGRRLPPSENAEISENSPPSSRRYYWLLVRADPSGAPLDDV
TPLVDTKSAGPLATVTLTDAGEKYALLVQQVAADGSLIAEARVTITCKYV
RRELRGLTAEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNS
PDYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLDAAHLGTE
WPSSEIFSPDMFGSALGSPENQFQISDGWFSNITSLYDPWGEILTPAESF
VTTSRNSYGFVDGLYNFQVG*
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mRNA from alignment at E-fasciculatus_F_contig14204:79..2313-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14204.3074.1 ID=mRNA_E-fasciculatus_F_contig14204.3074.1|Name=mRNA_E-fasciculatus_F_contig14204.3074.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2235bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14204:79..2313- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGAAAAGATATTCCGACTCCGCCGCGGGCGGCGGCATCCGCAAGGAGCG GCCCGGCAGCCTGCAACTCAGGGCCACCAACGAATACGGGGAGTACGACG CCGAGGCTCTGGCACTGTACGGGCTGGACATGGTGGTGGAGCCCCACCGG GCGACCAGAATAACTGTCTCCAGCCGACCCGGCCGCCGCCTCCCGCCATC GGAGAACGCGGAGATCTCGGAGAACTCTCCGCCGTCGTCGAGGCGCTACT ATTGGCTGCTGGTGCGGGCGGATCCATCGGGGGCCCCGCTGGATGACGTG ACCCCTCTGGTGGACACGAAGTCGGCGGGACCCCTGGCGACGGTTACGCT CACGGACGCGGGCGAGAAGTACGCCCTGCTAGTGCAGCAGGTGGCGGCTG ACGGGTCTCTGATTGCGGAGGCCCGGGTCACGATCACGTGCAAGTACGTA CGCCGGGAGCTGAGGGGCCTAACGGCGGAGGATCGAACCGGGTTCTTCGC GGCGATGCGGGAGTTCTACACGGTATCGCTGGAGGAGGGGAGGGACAAGT ACGGGGAAGGGTTCTCCAACGCCAAGCACGTGGCCGCTTACCATAACAGC CCGGTGAGGATATTGGGGGAAGAGGAGGCCGGGGGCAGACAGCAGAAGTG CGCGTTGGGGGGGGAGGGTAGAGACACAGCAGATTGTGAATAATGTATGC CTGCATTGATCTGAAAGAGGCACATTTAAGGTGGGTGGGGGGAGGTAATG TGGAGATACAGCATGAACAGGTCCCATGTTCCCAACGTCCATTGGGGATG ATCCACTCGTGGAATGTACTTGGTACATGACTGCTGTACACATTATTTTT CTTTTACTTTTGATTTGGTGGTGGTTCGTTGGGGTCTTCAGGTCAAAATG CGTCAGCTGTGTGAGCTGTTCGAGCTCGGAAAGCACCAAGGTTGGTAGCC AGCTTGTCGAGGTCGAAACATCGACACACATACCGTCGAACGTTGTGGTT TTACTGCAAAGGAGTCAGGATGTCTTACGGTGTGATCGGGGCAAAGGTCG TCCTTCGGGTTTGTTTGTATGTTCATCATACCGCTGAATGCAGAACGGGG ATATTGTACTGCGGTTTTGCCTTGCCTCGAAAAGCACAGAAGAGCAGATA GTGGAGGCAGGCATCGAAACGTGCGTTCTCGTGCAGACGACGGCATCAAC AGCTTCAATCACGAATCTTCTTTTTTTCTCATCTCTTGCTGTGTCTCACC CAGGACTATTGCTTCCACAACGGGATGCACTTCTTGAACGCTCACGCCGC CTTCGACCTCTGGGTCGAGAGCAACCTTCAGAAGATCGACCCAAAGGTGT CCCTTCCCCAGTGGGACTACATGCTGGACGCTGCACACCTCGGGACCGAG TGAGTTGGTCTTGAAGGATTCCACACAAGATTTCACAACACTAGACGGAC ACAGTCACTTGACACACCACCCAATCGTGTCGCTCGCTGAATTGGGTTGC ATTCTGCACGCCGCCCACACTCGGGACCGTTTGAGCGCCCGAGTTGGTCT TACGGTGTTCCACACAAGGTAAATACACCCAATTTAGAAGAAGGTGTGGT GTTGCTCCCTCAACGGGACTGGATCAGCAGCGTTTTCTTCATCACGGCAA GGAAGAACCAGCAACCCCGTTGTTTCTCCCCATGTTTGCAAAGGCGATTA ACGTATTAAAAAGCGTTCTGCTGTACATAACACGTGTTTGTCCACTATGT GTGTAAGCCGCCCGGGTGAGTGTTGGGCTACCGTCCTCCACACAAGATAG CACAGCACAAAAAGAGCAGCACCCCACGCAACATTGTCGCCCTCCCAATC ATCATTACTGGACACGCCTTCCCCTCGTGGGACCCCGGTTGGAACGCCGA AGATACACCGAGAGGTGAGGAAAAGACTGCCGTTCAACGTAAATGGGACG GTAATTTACACACACAAGGACACCACAACACCTGAAGCGTCCGATTTCGA TCCCTCGACCTATCTGTGCAGGTGGCCATCGAGCGAAATCTTCAGCCCGG ACATGTTTGGATCGGCGTTGGGTTCTCCGGAGAACCAGTTCCAGATCTCC GACGGGTGGTTCTCCAACATTACGTCCTTGTACGACCCGTGGGGTGAAAT TCTAACCCCCGCGGAATCGTTCGTCACAACGAGCCGCAACTCGTACGGTT TCGTGGACGGCTTATACAATTTCCAGGTAGGGTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14204:79..2313-

>mRNA_E-fasciculatus_F_contig14204.3074.1 ID=mRNA_E-fasciculatus_F_contig14204.3074.1|Name=mRNA_E-fasciculatus_F_contig14204.3074.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1926bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14204:79..2313- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGAAAAGATATTCCGACTCCGCCGCGGGCGGCGGCATCCGCAAGGAGCG
GCCCGGCAGCCTGCAACTCAGGGCCACCAACGAATACGGGGAGTACGACG
CCGAGGCTCTGGCACTGTACGGGCTGGACATGGTGGTGGAGCCCCACCGG
GCGACCAGAATAACTGTCTCCAGCCGACCCGGCCGCCGCCTCCCGCCATC
GGAGAACGCGGAGATCTCGGAGAACTCTCCGCCGTCGTCGAGGCGCTACT
ATTGGCTGCTGGTGCGGGCGGATCCATCGGGGGCCCCGCTGGATGACGTG
ACCCCTCTGGTGGACACGAAGTCGGCGGGACCCCTGGCGACGGTTACGCT
CACGGACGCGGGCGAGAAGTACGCCCTGCTAGTGCAGCAGGTGGCGGCTG
ACGGGTCTCTGATTGCGGAGGCCCGGGTCACGATCACGTGCAAGTACGTA
CGCCGGGAGCTGAGGGGCCTAACGGCGGAGGATCGAACCGGGTTCTTCGC
GGCGATGCGGGAGTTCTACACGGTATCGCTGGAGGAGGGGAGGGACAAGT
ACGGGGAAGGGTTCTCCAACGCCAAGCACGTGGCCGCTTACCATAACAGC
CCGCAGAAAAGATATTCCGACTCCGCCGCGGGCGGCGGCATCCGCAAGGA
GCGGCCCGGCAGCCTGCAACTCAGGGCCACCAACGAATACGGGGAGTACG
ACGCCGAGGCTCTGGCACTGTACGGGCTGGACATGGTGGTGGAGCCCCAC
CGGGCGACCAGAATAACTGTCTCCAGCCGACCCGGCCGCCGCCTCCCGCC
ATCGGAGAACGCGGAGATCTCGGAGAACTCTCCGCCGTCGTCGAGGCGCT
ACTATTGGCTGCTGGTGCGGGCGGATCCATCGGGGGCCCCGCTGGATGAC
GTGACCCCTCTGGTGGACACGAAGTCGGCGGGACCCCTGGCGACGGTTAC
GCTCACGGACGCGGGCGAGAAGTACGCCCTGCTAGTGCAGCAGGTGGCGG
CTGACGGGTCTCTGATTGCGGAGGCCCGGGTCACGATCACGTGCAAGTAC
GTACGCCGGGAGCTGAGGGGCCTAACGGCGGAGGATCGAACCGGGTTCTT
CGCGGCGATGCGGGAGTTCTACACGGTATCGCTGGAGGAGGGGAGGGACA
AGTACGGGGAAGGGTTCTCCAACGCCAAGCACGTGGCCGCTTACCATAAC
AGCCCGGACTATTGCTTCCACAACGGGATGCACTTCTTGAACGCTCACGC
CGCCTTCGACCTCTGGGTCGAGAGCAACCTTCAGAAGATCGACCCAAAGG
TGTCCCTTCCCCAGTGGGACTACATGCTGGACGCTGCACACCTCGGGACC
GAGACTATTGCTTCCACAACGGGATGCACTTCTTGAACGCTCACGCCGCC
TTCGACCTCTGGGTCGAGAGCAACCTTCAGAAGATCGACCCAAAGGTGTC
CCTTCCCCAGTGGGACTACATGCTGGACGCTGCACACCTCGGGACCGAGT
GGCCATCGAGCGAAATCTTCAGCCCGGACATGTTTGGATCGGCGTTGGGT
TCTCCGGAGAACCAGTTCCAGATCTCCGACGGGTGGTTCTCCAACATTAC
GTCCTTGTACGACCCGTGGGGTGAAATTCTAACCCCCGCGGAATCGTTCG
TCACAACGAGCCGCAACTCGTACGGTTTCGTGGACGGCTTATACAATTTC
CAGGTAGGGTAGGTGGCCATCGAGCGAAATCTTCAGCCCGGACATGTTTG
GATCGGCGTTGGGTTCTCCGGAGAACCAGTTCCAGATCTCCGACGGGTGG
TTCTCCAACATTACGTCCTTGTACGACCCGTGGGGTGAAATTCTAACCCC
CGCGGAATCGTTCGTCACAACGAGCCGCAACTCGTACGGTTTCGTGGACG
GCTTATACAATTTCCAGGTAGGGTAG
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