mRNA_E-fasciculatus_F_contig14024.2951.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14024.2951.1 vs. uniprot
Match: D8LHR8_ECTSI (CTLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHR8_ECTSI) HSP 1 Score: 575 bits (1481), Expect = 1.990e-194 Identity = 306/344 (88.95%), Postives = 311/344 (90.41%), Query Frame = 1
Query: 1 GSNDKLVKLLKLPETTTESQQQ----PGFGDIHDGDAEANNFVLRGHTGTVRDLCYPPPPPTFAGTPAASASSERLLSVGAGDYACRVWDVRASAAXXXXXXGIGPLVLLRGHTDTVFSCSMLPGGNVAVTGGADASVRLWDTRTGDSVRSLIVEGKEVLCVRPWPGDPERLVATAHSGGCIFLXXXXTGRALTSILHHTDQTRSLDFSQDGSSLLTASFDGLIGVCDCRPRGTQSTASLRLGNPPALGGASG--AEDPEMDVRVMSMLRAHGGRVLQAKWKPRPAIGGGGGLGYGGRPAFLTSSTDCTVMLWTLSGGMG--AAAGRGGDRVSPSYGASGSGVV 1008
GSNDKLV+LLKLP TT ESQQQ PGF D + DAE ++ VLRGHTGTVRDLCYP PPPTFAG PAASASSERLLSVGAGDYACRVWDV XXXXXX I PLVLLRGHTDTVFSCSMLPGGNVAVTGGADASVRLWDTRTGDSVRSLIVEGKEVLCVRPWPGDPERLVATAHSGGCIFLXXXXTGRALTSILHHTDQTRSLDFSQDGSSLLT SFDGLIGVCDCRPRGT STASLRLGNPPALGGASG AEDPEMDVRVMSMLRAHGGRVLQAKWKPR A+ GGG LGYGGRPAFLTSSTDCTVMLWTLSGGMG AAAGRGG RV PSYG SGSGVV
Sbjct: 798 GSNDKLVRLLKLPGTTPESQQQXXQQPGFSDRNGCDAEPSSLVLRGHTGTVRDLCYPLPPPTFAGPPAASASSERLLSVGAGDYACRVWDVTGGXXXXXXXXXIAPLVLLRGHTDTVFSCSMLPGGNVAVTGGADASVRLWDTRTGDSVRSLIVEGKEVLCVRPWPGDPERLVATAHSGGCIFLXXXXTGRALTSILHHTDQTRSLDFSQDGSSLLTGSFDGLIGVCDCRPRGTHSTASLRLGNPPALGGASGGEAEDPEMDVRVMSMLRAHGGRVLQAKWKPRTAVSGGG-LGYGGRPAFLTSSTDCTVMLWTLSGGMGMAAAAGRGGGRVPPSYGVSGSGVV 1140
BLAST of mRNA_E-fasciculatus_F_contig14024.2951.1 vs. uniprot
Match: A0DRT5_PARTE (CTLH domain-containing protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DRT5_PARTE) HSP 1 Score: 72.8 bits (177), Expect = 1.910e-10 Identity = 59/247 (23.89%), Postives = 92/247 (37.25%), Query Frame = 1
Query: 1 GSNDKLVKLLKLPETTTESQQQPGFGDIHDGDAEANNFVLRGHTGTVRDLCYPPPPPTFAGTPAASASSERLLSVGAGDYACRVWDVRASAAXXXXXXGIGPLVLLRGHTDTVFSCSMLPGGNVAVTGGADASVRLWDTR-----------------------TGDSVRSLIVEGKEVLCVRPWPGDPERLVATAHSGGCIFLXXXXTGRALTSILHHTDQTRSLDFSQDGSSLLTASFDGLIGVCD 672
GSNDK VKL + E T +FVL GH G VR +C+ + RL+S G D ++WDV L GHT T++ G+ V+ G D ++R+WD R T ++++L+ K+ + L AHS G + + + + ++ HHT R ++F G + + SFD I + D
Sbjct: 336 GSNDKTVKLYNVEEDT--------------------DFVLVGHRGLVRSVCF--------------SDENRLMSAGQ-DAVIKIWDVETQKCIRN----------LEGHTQTIYCLQTAGDGSYQVSCGMDKTLRIWDQRASRAQGVMTMQTEINYVSLSESTTNYNLQNLVKGSKKAPQF-----SSQGLAVLAHSDGVVSVWNIQHQKCVKTLKHHTMDCRCVEFDPTGKYICSVSFDSTIALYD 532
BLAST of mRNA_E-fasciculatus_F_contig14024.2951.1 vs. uniprot
Match: A0A7S3PSD3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PSD3_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 4.190e-8 Identity = 44/158 (27.85%), Postives = 60/158 (37.97%), Query Frame = 1
Query: 439 SLIVEGKEVLCVRPWPGDPERLVATAHSGGCIFLXXXXTGRALTSILHHTDQTRSLDFSQDGSSLLTASFDGLIGVCDCRPRGTQSTASLRLGNPPALGGASGAEDPEMDVRVMSMLRAHGGRVLQAKWKPRPAIGGGGGLGYGGRPAFLTSSTDCTV 912
SL + + + + + VAT H G + G A+ + H D RS+DFS DG LLTASFDG +G+ D AS R H +VLQA+W P+ +P F+T S D T
Sbjct: 3 SLCIPTESIAHSISYSPNTNHTVATGHLDGSCTIWDIRKGSAMYCLNQHDDDVRSIDFSPDGRWLLTASFDGTVGIIDTEVFTQDFVASFR---------------------------GHATKVLQAQWHPK-------------QPYFVTCSADNTA 120
BLAST of mRNA_E-fasciculatus_F_contig14024.2951.1 vs. uniprot
Match: A0A0L0D2F8_THETB (CTLH domain-containing protein (Fragment) n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D2F8_THETB) HSP 1 Score: 65.1 bits (157), Expect = 7.750e-8 Identity = 67/234 (28.63%), Postives = 89/234 (38.03%), Query Frame = 1
Query: 1 GSNDKLVKLLKLPETTTESQQQPGFGDIHDGDAEANNFVLRGHTGTVRDLCYPPPPPTFAGTPAASASSERLLSVGAGDYACRVWDVRASAAXXXXXXGIGPLVLLRGHTDTVFSCSMLPGGNVAVTGGADASVRLWDTRTGDSVRSLIVEGKEVLCVRPWPGDPERLVATAHSGGCIFLXXXX---TGRALTSILHHTDQTRSLDFSQDGSSLLTASFDGLIGVCDCRPRGTQ 693
GSN K++K+ T VLRGH+GTVRDL + P S L S GAG ++WDV A G + +RG S P V V+ G D +VR+WD R + S + EV + G LV + G + L G L S HTD +S+ G +LT S+DG + V D TQ
Sbjct: 780 GSNSKVIKVYAPSSRAT--------------------VVLRGHSGTVRDLAFAP-------------GSTVLYSGGAGRAKVKIWDVGTGVASATLAGHTGHVYAVRGGVG-----STEPEHGV-VSAGLDGTVRMWDARASVPLVSTLHLSDEVYGLDV--GRVGSLVGVGLASGVLELHDMRRMVAGAPLVSAPLHTDAIKSVALK--GGYVLTGSYDGCVVVADTTSLRTQ 970
BLAST of mRNA_E-fasciculatus_F_contig14024.2951.1 vs. uniprot
Match: A0A1J8PLS1_9AGAM (Uncharacterized protein n=1 Tax=Rhizopogon vesiculosus TaxID=180088 RepID=A0A1J8PLS1_9AGAM) HSP 1 Score: 62.8 bits (151), Expect = 2.380e-7 Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 1
Query: 322 GHTDTVFSCSMLPGGNVAVTGGADASVRLWDTRTGDSVRSLIVEGKEVLCVRPWPGDPERLVATAHSGGCIFLXXXXTGRALT-SILHHTDQTRSLDFSQDGSSLLTASFDGLI 660
GHTD+V + ++ P G VT D ++RLWD + G ++ L+ V V GD + L+A+ G + TGR+LT +I H + SLDFS DG+ L+T S+D I
Sbjct: 20 GHTDSVTTAAVFPDGRRMVTSSHDKTLRLWDLKGGVVLKKLVGHIGAVWAVAV-SGDGQ-LIASGDEEGSLIAWHGETGRSLTRAIKGHHYRICSLDFSPDGTLLVTGSWDCTI 131
BLAST of mRNA_E-fasciculatus_F_contig14024.2951.1 vs. uniprot
Match: UPI001B873906 (uncharacterized protein n=1 Tax=Suillus paluster TaxID=48578 RepID=UPI001B873906) HSP 1 Score: 60.1 bits (144), Expect = 3.320e-6 Identity = 39/118 (33.05%), Postives = 59/118 (50.00%), Query Frame = 1
Query: 304 PLVLLRGHTDTVFSCSMLPGGNVAVTGGADASVRLWDTRTGDSVRSLIVEGKEVLCVRPWPGDPERLVATAHSGGCIFLXXXXTGRALTS--ILHHTDQTRSLDFSQDGSSLLTASFD 651
PL + HT TVF+ ++ P VTG D ++RLWD +TG ++ + EG R++A+ +GG TG LT I H+ S+DFS DG++L++ S D
Sbjct: 10 PLRTFKDHTGTVFAVAVFPDRRRMVTGSYDKTLRLWDLQTGAVLKKM--EGHRDKLRGLAVSRNGRMIASGDTGGEFMAWHGETGEPLTKEVIRAHSSYISSMDFSLDGTTLVSGSGD 125
BLAST of mRNA_E-fasciculatus_F_contig14024.2951.1 vs. uniprot
Match: A0A836C5R9_9CHLO (ANAPC4_WD40 domain-containing protein n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C5R9_9CHLO) HSP 1 Score: 59.7 bits (143), Expect = 4.730e-6 Identity = 57/199 (28.64%), Postives = 79/199 (39.70%), Query Frame = 1
Query: 127 HTGTVRDLCYPPPPPTFAGTPAASASSERLLSVGAGDYACRVWDVRASAAXXXXXXGIGPLVLLRGHTDTVFSCSMLPG------------GNVAVTGGADASVRLWDTRTGDS-VRSLIVEGKEVLCVRPWPGDPER--------------LVATAHSGGCIFLXXXXTGRALTSILHHTDQTRSLDFSQDGSSLLTA 642
H G V+ L + PP P +G AA + RLL+ G D A RVW V A L+ + V + LP G +AV GG D VRLWD +G S RS+ V C+ PG P L+A+ + L G+ ++ HT +L +S DG +L +A
Sbjct: 1452 HAGPVQALAWAPPGPE-SGPEAAEGTGRRLLASGGPDGAVRVWAVGPGWAAAECT------ATLQSRSGLVRCLAWLPRSTSGGXXXXXXRGTLAVGGGGDGCVRLWDPASGSSGARSMQCHAGPVTCLALSPGGPAAGDPSAGLPLPMPLPLLASGGEDKVVRLWEGGGGKCRGNLKGHTAALTALAWSPDGGALASA 1643
BLAST of mRNA_E-fasciculatus_F_contig14024.2951.1 vs. uniprot
Match: A0A0C9ZYS3_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Suillus luteus UH-Slu-Lm8-n1 TaxID=930992 RepID=A0A0C9ZYS3_9AGAM) HSP 1 Score: 57.8 bits (138), Expect = 8.230e-6 Identity = 38/119 (31.93%), Postives = 61/119 (51.26%), Query Frame = 1
Query: 304 PLVLLRGHTDTVFSCSMLPGGNVAVTGGADASVRLWDTRTGDSVRSLIVEGKEVLCVRPWPGDPERLVATAHSGGCIFLXXXXTGRALT-SILHHTDQTRSLDFSQDGSSLLTASFDGL 657
P+ +GH V + ++ P VTG D ++R+WD TG ++ + EV + R++A GG I TG++LT +I H S+DFS DG+ L+T+S+DG+
Sbjct: 13 PIRDFKGHEKIVTAVAVFPDRRRMVTGSYDKTLRIWDLETGLVLKKMEGYRDEVRALGV--SRDGRIIAGGDFGGEIIAWHGETGKSLTQAIKAHFKGISSVDFSLDGTVLVTSSYDGM 129
BLAST of mRNA_E-fasciculatus_F_contig14024.2951.1 vs. uniprot
Match: A0A8J5DQ50_9DIPT (Uncharacterized protein n=1 Tax=Bradysia odoriphaga TaxID=1564500 RepID=A0A8J5DQ50_9DIPT) HSP 1 Score: 57.8 bits (138), Expect = 8.910e-6 Identity = 66/263 (25.10%), Postives = 91/263 (34.60%), Query Frame = 1
Query: 1 GSNDKLVKLLKLPETTTESQQQPGFGDIHDGDAEANNFVLRGHTGTVRDLCYPPPPPTFAGTPAASASSERLLSVGAGDYACRVWDVRASAAXXXXXXGIGPLVLLRGHTDTVFSCSMLPGGNVAVTGGADASVRLWDTRT-------------------GDSVRSLIVEGKEVLCVRPWPGDPERLVATAHSGGCIFLXXXXTGR--------ALTSILHHTD------------QTRSLDFSQDGSSLLTASFDGLIGVCD 672
GS DK V + L D D A + LRGHTG+V LC+ A+ LLS +GD R+WDVRA G L + + + P GN G + V DTRT S + G+ + + +P + V AH G CI + TG+ AL S+ + R++ FS DG L +AS D I + D
Sbjct: 44 GSFDKSVAIFSL-----------------DRDRFAKDTTLRGHTGSVDQLCW-------------HATLPDLLSTASGDKTVRIWDVRA-----------GKLPTIINTKGENINITWSPDGNTIAVGNKEDLVTFIDTRTLKICGEQPFNFEVNEIAWNNTSDLFFLTNGQGCVHILSYPDLELQHVLKAHPGTCICIEFDPTGKYFATGSADALVSLWDANELACVRVFSRLDWPVRTISFSHDGRLLASASEDLCIDIGD 265
BLAST of mRNA_E-fasciculatus_F_contig14024.2951.1 vs. uniprot
Match: N1PVK4_DOTSN (UTP15_C domain-containing protein n=2 Tax=Mycosphaerellaceae TaxID=93133 RepID=N1PVK4_DOTSN) HSP 1 Score: 58.2 bits (139), Expect = 1.080e-5 Identity = 48/153 (31.37%), Postives = 66/153 (43.14%), Query Frame = 1
Query: 235 DYACRVWDVRASAAXXXXXXGIGPLVLLRGHTDTVFSCSMLPG---GNVAVTGGADASVRLWDTRTGDSVRSLIVEGKEVLCVRPWPGDPERLVA------TAHSGGCIFLXXXXTGRALTSILHHTDQTRSLDFSQDGSSLLTASFDGLIGV 666
D RVWD+ A G+G H D V S LPG GN+ V+GG D +VRLWDTR+G+S ++ E L+A A SG + + G+A I H +L +Q G+ +LT DG + V
Sbjct: 157 DATVRVWDITEEEATWT---GVG-------HQDYVRSGCYLPGYQGGNMIVSGGYDQTVRLWDTRSGNSPALTFKFSNQI----------ESLLALSSTNLAAASGNEVSIVNLIAGKAEHVIRSHQKTVMTLSSAQHGTRILTGGLDGHVKV 289 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14024.2951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14024.2951.1 >prot_E-fasciculatus_F_contig14024.2951.1 ID=prot_E-fasciculatus_F_contig14024.2951.1|Name=mRNA_E-fasciculatus_F_contig14024.2951.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=338bp GSNDKLVKLLKLPETTTESQQQPGFGDIHDGDAEANNFVLRGHTGTVRDLback to top mRNA from alignment at E-fasciculatus_F_contig14024:565..3429- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14024.2951.1 ID=mRNA_E-fasciculatus_F_contig14024.2951.1|Name=mRNA_E-fasciculatus_F_contig14024.2951.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2865bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14024:565..3429- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14024:565..3429- >mRNA_E-fasciculatus_F_contig14024.2951.1 ID=mRNA_E-fasciculatus_F_contig14024.2951.1|Name=mRNA_E-fasciculatus_F_contig14024.2951.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2028bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14024:565..3429- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |