mRNA_E-fasciculatus_F_contig14.2926.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14.2926.1 vs. uniprot
Match: A0A6H5L310_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L310_9PHAE) HSP 1 Score: 560 bits (1443), Expect = 1.060e-196 Identity = 332/433 (76.67%), Postives = 335/433 (77.37%), Query Frame = 1
Query: 1 MSLLGLAGYDTDGSDGDEGTNNNQRRSPEGENSSAPQEAAAXXXXNSNANNVLEENSDSRLGESVDEEAGANRELRTGILRASSFDAPAPPSKESRQFFMPLPSPLVKLDNASPSASSPFITYEPPDGATGGAGEEGGGEDAADDGTKDEGDGDIIKPEYRDMLPPEATGQANPELRAKLQKFLNRMQGDFTKVIKGKKDYGNPAVLAQICRYCSVDDKGTNYPADRMVHPSVYDTKDFHDSLMMQEQRRAKRPXXXXXXXXXXXXXXXXXXXXXXXXTA--PALRPAAATAARGSVDAAVPA-SGTTRKRGSKWGVAGSSLPFAGQQMQMQAAPPVQMPHMQGSAAXXXXXXXXXXXXXXXXXXXXXMARAGPVGAGSAAPVSKGRVGFSADPGATAARAGQAALLLNAQVQAAQAEKEAQHRAEAIARVQV 1290
MSLLGLAGYDTDGS XXXX N LEENSDSRLGE VDEE G NRELR GILRASSFDAPAPPSKESRQFFMPLPSPLVKLDNASPSASSPF TYEPPDGATGGAGEEGGGED ADDG KDEGDGDIIKPEYRDMLPPEATGQANPELRAKLQKFLNRMQGDFTKVIKGKKDYGNPAVLAQICRYCSVDDKGTNYPADRMVHPSVYDTKDFHD+LMMQEQRRAKRP P LRPAAAT ARGSVDAAVPA SG+TRKRGSKWGVAGSSLPFAGQQMQMQAA PV PHMQGSAA MAR G VGAG+ APVSKGRVGFSADPGATAARAGQAALLLNAQVQAAQAEKEAQHRAEAIARVQV
Sbjct: 1 MSLLGLAGYDTDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNALEENSDSRLGELVDEEEGTNRELRAGILRASSFDAPAPPSKESRQFFMPLPSPLVKLDNASPSASSPFTTYEPPDGATGGAGEEGGGEDVADDGAKDEGDGDIIKPEYRDMLPPEATGQANPELRAKLQKFLNRMQGDFTKVIKGKKDYGNPAVLAQICRYCSVDDKGTNYPADRMVHPSVYDTKDFHDALMMQEQRRAKRPKPDEAKANTPHLNKVAQGATVAAAXXXXPPLRPAAATGARGSVDAAVPAASGSTRKRGSKWGVAGSSLPFAGQQMQMQAAAPVPTPHMQGSAAASTLPLAGSG-----------MARTGSVGAGTTAPVSKGRVGFSADPGATAARAGQAALLLNAQVQAAQAEKEAQHRAEAIARVQV 422
BLAST of mRNA_E-fasciculatus_F_contig14.2926.1 vs. uniprot
Match: D7G7V8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7V8_ECTSI) HSP 1 Score: 560 bits (1442), Expect = 2.870e-196 Identity = 372/431 (86.31%), Postives = 377/431 (87.47%), Query Frame = 1
Query: 1 MSLLGLAGYDTDGSDGDEGTNNNQRRSPEGENSSAPQEAAAXXXXNSNANNVLEENSDSRLGESVDEEAGANRELRTGILRASSFDAPAPPSKESRQFFMPLPSPLVKLDNASPSASSPFITYEPPDGATGGAGEEGGGEDAADDGTKDEGDGDIIKPEYRDMLPPEATGQANPELRAKLQKFLNRMQGDFTKVIKGKKDYGNPAVLAQICRYCSVDDKGTNYPADRMVHPSVYDTKDFHDSLMMQEQRRAKRPXXXXXXXXXXXXXXXXXXXXXXXXTAPALRPAAATAARGSVDAAVPA-SGTTRKRGSKWGVAGSSLPFAGQQMQMQAAPPVQMPHMQGSAAXXXXXXXXXXXXXXXXXXXXXMARAGPVGAGSAAPVSKGRVGFSADPGATAARAGQAALLLNAQVQAAQAEKEAQHRAEAIARVQV 1290
MSLLGLAGYDTDGSDGDEG NNNQRRSP+ EN+S QE AA +SNANN LEENSDSRLGESVDEEAGANRELRTGILRASSFDAPAPPSKESRQFFMPLPSPLVKLDNASPSASSPFITYEPPDG GGAG EG GE AADDG KDEGDGDIIKPEYRDMLPPEATGQANPELRAKLQKFLNRMQGDFTKVIKGKKDYGNPAVLAQICRYCSVDDKGTNYPADRMVHPSVYDTKDFHDSLMMQEQRRAKRPXXXXXXXXXXXXXXXXXXXXXXXX AAAT ARGSVDAAVPA SG+TRKRGSKWGVAGSSLPFAGQQM XXXXXXXXXXXXXXXXXXXXX AAPVSKGRVGFSADPGATAARAGQAALLLNAQVQAAQAEKEAQHRAEAIARVQ+
Sbjct: 1 MSLLGLAGYDTDGSDGDEGANNNQRRSPQAENTSGAQEPAAGASGSSNANNALEENSDSRLGESVDEEAGANRELRTGILRASSFDAPAPPSKESRQFFMPLPSPLVKLDNASPSASSPFITYEPPDGTAGGAGAEGEGEGAADDGAKDEGDGDIIKPEYRDMLPPEATGQANPELRAKLQKFLNRMQGDFTKVIKGKKDYGNPAVLAQICRYCSVDDKGTNYPADRMVHPSVYDTKDFHDSLMMQEQRRAKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AAATGARGSVDAAVPAASGSTRKRGSKWGVAGSSLPFAGQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XAAPVSKGRVGFSADPGATAARAGQAALLLNAQVQAAQAEKEAQHRAEAIARVQM 427
BLAST of mRNA_E-fasciculatus_F_contig14.2926.1 vs. uniprot
Match: A0A1W4XTK5_AGRPL (SAP30-binding protein n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4XTK5_AGRPL) HSP 1 Score: 61.2 bits (147), Expect = 7.760e-7 Identity = 32/94 (34.04%), Postives = 56/94 (59.57%), Query Frame = 1
Query: 490 LPPEATGQANPELRAKLQKFLNRMQG---DFTKVIKGKKDYGNPAVLAQICRYCSVDDKGTNYPADRMVHPSVYDTKDFHDSLM-MQEQRRAKR 759
LPPE G + EL+ K+ + +MQ D VI+ +KD+ NP++ ++ ++CS+++ GTNYPAD + P + + F++ L +Q+ KR
Sbjct: 113 LPPEPLGHCSTELQEKILRLHEKMQNNALDMNAVIQQRKDFRNPSIYEKLIQFCSINELGTNYPAD-IYDPLKWGKESFYEDLAKVQKTEMEKR 205
BLAST of mRNA_E-fasciculatus_F_contig14.2926.1 vs. uniprot
Match: A0A6L2Q959_COPFO (Uncharacterized protein n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2Q959_COPFO) HSP 1 Score: 57.4 bits (137), Expect = 1.490e-5 Identity = 29/93 (31.18%), Postives = 53/93 (56.99%), Query Frame = 1
Query: 490 LPPEATGQANPELRAKLQKFLNRMQG---DFTKVIKGKKDYGNPAVLAQICRYCSVDDKGTNYPADRMVHPSVYDTKDFHDSLMMQEQRRAKR 759
LPPE TG + L+ K+ + RM+ D VI+ +KD+ NP++ ++ ++CS+++ GTNYPA + P + + F++ L ++ R
Sbjct: 98 LPPEPTGLCSNLLQEKISRLYERMESNGLDMNHVIQQRKDFRNPSIYEKLIQFCSINEFGTNYPA-QAYDPLRWGKESFYEELARVQKAEMDR 189
BLAST of mRNA_E-fasciculatus_F_contig14.2926.1 vs. uniprot
Match: A0A067RAL8_ZOONE (SAP30-binding protein n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067RAL8_ZOONE) HSP 1 Score: 57.0 bits (136), Expect = 2.000e-5 Identity = 28/93 (30.11%), Postives = 53/93 (56.99%), Query Frame = 1
Query: 490 LPPEATGQANPELRAKLQKFLNRMQG---DFTKVIKGKKDYGNPAVLAQICRYCSVDDKGTNYPADRMVHPSVYDTKDFHDSLMMQEQRRAKR 759
LPPE TG + L+ K+ + +M+ D VI+ +KD+ NP++ ++ ++CS+++ GTNYPA + P + + F++ L ++ R
Sbjct: 98 LPPEPTGLCSTSLQDKINRLYEKMESNGLDMNYVIQQRKDFRNPSIYEKLIQFCSINEFGTNYPA-QTYDPLRWGKESFYEELARVQKTEMDR 189 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14.2926.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14.2926.1 >prot_E-fasciculatus_F_contig14.2926.1 ID=prot_E-fasciculatus_F_contig14.2926.1|Name=mRNA_E-fasciculatus_F_contig14.2926.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=430bp MSLLGLAGYDTDGSDGDEGTNNNQRRSPEGENSSAPQEAAAGASSNSNANback to top mRNA from alignment at E-fasciculatus_F_contig14:1693..4790- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14.2926.1 ID=mRNA_E-fasciculatus_F_contig14.2926.1|Name=mRNA_E-fasciculatus_F_contig14.2926.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3098bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14:1693..4790- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14:1693..4790- >mRNA_E-fasciculatus_F_contig14.2926.1 ID=mRNA_E-fasciculatus_F_contig14.2926.1|Name=mRNA_E-fasciculatus_F_contig14.2926.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2580bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14:1693..4790- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |