prot_E-fasciculatus_F_contig13967.2906.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13967.2906.1
Unique Nameprot_E-fasciculatus_F_contig13967.2906.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length256
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13967.2906.1 vs. uniprot
Match: D7FN61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN61_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 7.950e-89
Identity = 167/181 (92.27%), Postives = 169/181 (93.37%), Query Frame = 0 
Query:   82 MSTRCVTDFDVTYGSALAPAGFHRITTRVGGSANLNTTASSQQSFLWTHEGLSRGNPVVQIRVTYDDEPGPEGFERVSRDLAKGGTSGRKAFLWLKRHAQQIPRTASATALDQRRXXXXXXXXXXXXXXXXXX------EGDGGILPIGEVVVAFGSSDPNVEEATETVEQERAAGVVDGA 256
            MSTRCVTDFDVTYGSALAPAGFHR TTRVGGSANLNTTASSQQSFLWTHEGLSRGNPVVQ+ VTYDDEPGPEGFERVSRDLAKGGTSGRKAFLWLKRHAQQIPRTASATALDQRRXXXXXXXXXXXXXXXXXX      EGD G+LPIGEVVVAFGSSDPNVEEATE  EQERAAG VDGA
Sbjct:    1 MSTRCVTDFDVTYGSALAPAGFHRTTTRVGGSANLNTTASSQQSFLWTHEGLSRGNPVVQVSVTYDDEPGPEGFERVSRDLAKGGTSGRKAFLWLKRHAQQIPRTASATALDQRRXXXXXXXXXXXXXXXXXXXXXXXEEGDSGVLPIGEVVVAFGSSDPNVEEATEAAEQERAAGAVDGA 181
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BLAST of mRNA_E-fasciculatus_F_contig13967.2906.1 vs. uniprot
Match: A0A4D9CLS1_9STRA (USP domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLS1_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 7.530e-19
Identity = 50/112 (44.64%), Postives = 75/112 (66.96%), Query Frame = 0 
Query:   87 VTDFDVTYGSALAPAGFHRITTRVGGSANLNTTASSQ---QSFLWTHEGLSRGNPVVQIRVTYDDEPGPEGFERVSRDLAKGGTSGRKAFLWLKRHAQQIPRTASATALDQR 195
            + DFDVTYG ALAPAGF R TT     A+++  A+     ++FLW H+GL+RG P+V + V Y+DEP P+GF +V+RD++KG  S +++FL  +R A+  P+ + A  +  R
Sbjct:    3 IRDFDVTYGDALAPAGFSRATTPAKDCADISAGATGSGAGRTFLWYHKGLNRGEPIVAVDVIYEDEPVPQGFVKVARDMSKG--SHQRSFLCFRR-ARSPPQESGAEGIADR 111
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BLAST of mRNA_E-fasciculatus_F_contig13967.2906.1 vs. uniprot
Match: A0A836CI44_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI44_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.870e-16
Identity = 47/98 (47.96%), Postives = 62/98 (63.27%), Query Frame = 0 
Query:   87 VTDFDVTYGSALAPAGFHRITTRVGGSANLNTTASSQ----QSFLWTHEGLSRGNPVVQIRVTYDDEPGPEGFERVSRDLAKGGTSGRKAFLWLKRHA 180
            +T FDVT+GSALA AG+HR T   GG+AN+N +   Q    QSFLW  +  S+  PVV ++V YDDEP P G+E+V R +    +  R + L LKR A
Sbjct:    1 ITGFDVTFGSALAAAGYHRTTLHDGGTANINRSNDKQGVSSQSFLWYCDVPSKLGPVVDVQVLYDDEPTPPGWEKVPRSMVV--SDKRSSHLCLKRAA 96
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BLAST of mRNA_E-fasciculatus_F_contig13967.2906.1 vs. uniprot
Match: A0A813CFD0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CFD0_9DINO)

HSP 1 Score: 72.8 bits (177), Expect = 1.820e-11
Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 0 
Query:   87 VTDFDVTYGSALAPAGFHRITTRVGGSANLNTTASSQQSFLWTHEGLSRGNPVVQIRVTYDDEPGPEGFERVSRDLAKGGTSGRKAFLWLKR 178
            ++D  VTYGSALAPA +HRI T  G  A++N   +    +LW+ +  ++   +V I V YD E  PEGFE+VS+ L KG    R+A++ +K+
Sbjct:    4 ISDITVTYGSALAPAKYHRIVTLEGHGADVNK-GNGPPVYLWSKDRTNKEPAIVDISVIYDGEDVPEGFEKVSKTLLKG--VDRQAYICVKK 92
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13967.2906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FN61_ECTSI7.950e-8992.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9CLS1_9STRA7.530e-1944.64USP domain-containing protein n=5 Tax=Monodopsidac... [more]
A0A836CI44_9STRA2.870e-1647.96Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A813CFD0_9DINO1.820e-1142.39Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..256
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.707

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13967contigE-fasciculatus_F_contig13967:83..2314 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13967.2906.1mRNA_E-fasciculatus_F_contig13967.2906.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13967 83..2314 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13967.2906.1 ID=prot_E-fasciculatus_F_contig13967.2906.1|Name=mRNA_E-fasciculatus_F_contig13967.2906.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=256bp
MLPAPSCSLCLLCVCVCANARVEPGGGRAPAYRHDSMTGYTNSSPPRCRV
LHFASPPRWALRAPSKSKARYPDARPACCVEMSTRCVTDFDVTYGSALAP
AGFHRITTRVGGSANLNTTASSQQSFLWTHEGLSRGNPVVQIRVTYDDEP
GPEGFERVSRDLAKGGTSGRKAFLWLKRHAQQIPRTASATALDQRRRSSN
GTKEHEEAAAASQEEGDGGILPIGEVVVAFGSSDPNVEEATETVEQERAA
GVVDGA
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