mRNA_E-fasciculatus_F_contig1396.2900.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1396.2900.1 vs. uniprot
Match: D8LDQ2_ECTSI (ATP binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ2_ECTSI) HSP 1 Score: 817 bits (2110), Expect = 1.000e-280 Identity = 418/473 (88.37%), Postives = 436/473 (92.18%), Query Frame = 2
Query: 293 MREAVPTFENNAFLRKSLLEVKTLFERIDDLLQLCLPQEQQHDETSSTLRNAAHTAKRVYFSEQNLKTLKEYSDKLDSIALDFSGPMQVVAKQQANRMEEALLAIQITLDKGTDPSLKLMKRLVKGNVVDEELEELDETLGSGSFGLVMAGRYYGKPVAIKRALSSVFSAEDRETFRREAGTHFALRHDRIVQVIAFRTGGGSRPPCLVMERMERTLFHFLGINPAPLDLSGSLPFIIDICEGLKYLHQGGVLHRDIKSHNILLRNGGAKVSDFGLA-HVCSTIGRKTGNDQFLDEKAGTKFWMAPEVLSWGESSFDSDVFSLHVVLWEIIENRQGGTGDAIGDVLRKNPLEKLPIEGEGDGSDPAKMRLHKLIRTCGLLNRKDRPKIGEVLAEAKSIYDSLPRSGDVEEPSPATAHPLQGRDEEEGHLRPSESRRRAQEAENSNSSRGPWESWKDFDPCGVGAETKREQPNS 1708
MREAVPTFENNAF+RK LLEVKTLFER+DDL+QLCLPQEQQHDETSSTLRNAA TAKRVYFSEQNLK LKEYSDKLDSI LD S MQVVAKQQANRME L T DKGTDPSLKLMKRL+KGNVVDEELEELDETLG GSFG+VMAGRYYGKPVAIKRALSSVFSAEDRE FRREA THFA RHDRIVQVIAFRTGGGSRPPCLVMERM+RTLFHFLGI+PAPLDLSGSLP++IDICEGLKYLHQGGVLHRDIKSHNILLRNGGAKVSDFGLA H CST+GRKTGN+QF+DEKAGTKFWMAPE+LSWGESSFDSDVFSLHVVLWEIIENRQGGTGDAIGDVLR+N L KLPIEGEGD DPA MRLHKLIRTCGLL RKDRPKIGEVLAEA SIYDSLPRSG EEPS AT +PLQGRDEEEGHLRPSESRRRAQEAENS+S R PW SWKDFDPCGVGAE KREQ ++
Sbjct: 1 MREAVPTFENNAFIRKILLEVKTLFERMDDLVQLCLPQEQQHDETSSTLRNAARTAKRVYFSEQNLKILKEYSDKLDSIKLDLSVRMQVVAKQQANRMEAFL-----TQDKGTDPSLKLMKRLMKGNVVDEELEELDETLGCGSFGVVMAGRYYGKPVAIKRALSSVFSAEDRERFRREASTHFAQRHDRIVQVIAFRTGGGSRPPCLVMERMDRTLFHFLGISPAPLDLSGSLPYMIDICEGLKYLHQGGVLHRDIKSHNILLRNGGAKVSDFGLATHGCSTMGRKTGNNQFIDEKAGTKFWMAPEILSWGESSFDSDVFSLHVVLWEIIENRQGGTGDAIGDVLRRNRLAKLPIEGEGDERDPATMRLHKLIRTCGLLERKDRPKIGEVLAEATSIYDSLPRSGGAEEPSAATTYPLQGRDEEEGHLRPSESRRRAQEAENSDSLRAPWGSWKDFDPCGVGAENKREQASA 468
BLAST of mRNA_E-fasciculatus_F_contig1396.2900.1 vs. uniprot
Match: A0A6H5L846_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L846_9PHAE) HSP 1 Score: 264 bits (675), Expect = 1.280e-69 Identity = 138/239 (57.74%), Postives = 174/239 (72.80%), Query Frame = 2
Query: 1700 PNSQGEEALREQIDRIVATMDGMKEGIQERLMSLERFQAPNYPYPHLVMVQEIKTQGKRSPLSKLRGLKL---TLHFLCPVDMGKVPCGMNGEGYRFSARRSSVMKLAPALQVVMANAKVALRAALGLDVDISDFLKDFKDGLVEEIVDPALDEDVLLSVVNGDQGASTDMKRAIRASYEAMKNLMEEKLDRGMNTKGRDGYIDFREKMQPVGDGRGGMVWVRTENVRKWRDSLSLAAP 2407
P S GE+ L + I RI+ ++G GIQE LM L+ Q PNYPYPHLV+V+EI+TQG R L+K RG+ + TLHFL PVDM KVPCG++GEGYRF R V KL+P LQV + AKVAL+A GLDVDIS+FL+ K+G VEE+ D LDE+ L VV+G++ A D++R R SYEA+K M+++L+R N K DGYIDFREKMQ DG+GG+VWVR ENV+KWRDSLS A+P
Sbjct: 693 PGSNGEDVLAQMI-RILGRIEG---GIQESLMCLKNLQGPNYPYPHLVVVKEIETQGNRGLLTKARGIAMKDMTLHFLFPVDMSKVPCGVDGEGYRFRETRGWVKKLSPVLQVAVVTAKVALKATAGLDVDISEFLQAVKEGAVEEVADCTLDEEALSRVVSGEEVAGADLQRDTRVSYEALKKFMDKELNRRKNAKEGDGYIDFREKMQRESDGKGGIVWVRIENVQKWRDSLSTASP 927
BLAST of mRNA_E-fasciculatus_F_contig1396.2900.1 vs. uniprot
Match: A0A6H5L1D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1D3_9PHAE) HSP 1 Score: 241 bits (615), Expect = 6.440e-68 Identity = 131/234 (55.98%), Postives = 161/234 (68.80%), Query Frame = 2
Query: 1745 IVATMDGMKEGIQERLMSLERFQAPNYPYPHLVMVQEI-------KTQGKRSPLSKLRGL---KLTLHFLCPVDMGKVPCGMNGEGYRFSARRSSVMKLAPALQVVMANAKVALRAALGLDVDISDFLKDFKDGLVEEIVDPALDEDVLLSVVNGDQGASTDMKRAIRASYEAMKNLME-EKLDRGMNTKGRDGYIDFREKMQPVGDGRGGMVWVRTENVRKWRDSLSLAAPSK 2413
I +D + E QE LM + QAPNY YP LV+V+E+ K GK+S LSKLR L +TLHFLCPVDM KVPCG GEGYRF R V K++P LQV + AKVAL A GLDVDIS+FLKD KDGLV E+VD LDE LL V+GD +++R RASYEA+K M+ E++DR N + DGYIDFR++M+ V DGRGGMVWVR +NV+KW DS S+AAP++
Sbjct: 64 ISGRLDKVLESTQESLMRIRHLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSLLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTLDE-ALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 296
BLAST of mRNA_E-fasciculatus_F_contig1396.2900.1 vs. uniprot
Match: A0A6H5JFQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFQ1_9PHAE) HSP 1 Score: 246 bits (629), Expect = 6.600e-64 Identity = 142/241 (58.92%), Postives = 160/241 (66.39%), Query Frame = 2
Query: 1691 REQPNSQGEEALREQIDRIVATMDGMKEGIQERLMSLERFQAPNYPYPHLVMVQEIKTQGKRSPLSKLRGLKLTLHFLCPVDMGKVPCGMNGEGYRFSARRSSVMKLAPALQVVMANAKVALRAALGLDVDISDFLKDFKDGLVEEIVDPALDEDVLLSVVNGDQGASTDMKRAIRASYEAMKNLMEEKLDRGMNTKGRDGYIDFREKMQPVGDGRGGMVWVRTENVRKWRDSLSLAAPSK 2413
R PN QGEEAL ++RI AT+D ++ GIQE LM L+R QAPN P PHLV +TL FLCPVDM KVPCGMNGEGYRF RRS V KLAP LQ + DVD+S FL+ KDGLVEEIVD ALDE +L V NGD+ A DM+R RASYE +K ME KLDRG NT+G DGY DFREKMQ V DGRG MVW+RTENVR+WRDSLS AAPS+
Sbjct: 700 RSSPNYQGEEAL---LERIAATVDRVEGGIQESLMYLKRLQAPNCPCPHLVE-------------------DMTLRFLCPVDMEKVPCGMNGEGYRFRERRSGVKKLAPVLQRGES------------DVDLSYFLQAVKDGLVEEIVDGALDEGILFRVANGDENAGADMQRDARASYEVLKEFME-KLDRGNNTEGLDGYTDFREKMQRVSDGRGVMVWLRTENVREWRDSLSSAAPSR 905
BLAST of mRNA_E-fasciculatus_F_contig1396.2900.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE) HSP 1 Score: 241 bits (616), Expect = 6.590e-63 Identity = 128/234 (54.70%), Postives = 162/234 (69.23%), Query Frame = 2
Query: 1745 IVATMDGMKEGIQERLMSLERFQAPNYPYPHLVMVQEI-------KTQGKRSPLSKLRGL---KLTLHFLCPVDMGKVPCGMNGEGYRFSARRSSVMKLAPALQVVMANAKVALRAALGLDVDISDFLKDFKDGLVEEIVDPALDEDVLLSVVNGDQGASTDMKRAIRASYEAMKNLME-EKLDRGMNTKGRDGYIDFREKMQPVGDGRGGMVWVRTENVRKWRDSLSLAAPSK 2413
I +D + E QE LM + QAPNY YP LV+V+E+ K GK+S LSKLR L +TLHFLCPVDM KVPCG GEGYRF R V K++P LQV + A+VAL A GLDV+IS+FL+D KDGLV E+VD LDE+ LL V+GD +++R RASYEA+K M+ E++DR N + DGYIDFR++M+ V DGRGGMVWVR +NV+KW DS S+AAP++
Sbjct: 564 ISERLDKVLESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTARVALNATTGLDVNISNFLQDVKDGLVNELVDRTLDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 797
BLAST of mRNA_E-fasciculatus_F_contig1396.2900.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 246 bits (628), Expect = 1.340e-62 Identity = 130/240 (54.17%), Postives = 166/240 (69.17%), Query Frame = 2
Query: 1724 LREQIDRIVATMDGMKEGIQERLMSLERFQAPNYPYPHLVMVQEI-------KTQGKRSPLSKLRGL---KLTLHFLCPVDMGKVPCGMNGEGYRFSARRSSVMKLAPALQVVMANAKVALRAALGLDVDISDFLKDFKDGLVEEIVDPALDEDVLLSVVNGDQGASTDMKRAIRASYEAMKNLMEEKLDRGMNTKGRDGYIDFREKMQPVGDGRGGMVWVRTENVRKWRDSLSLAAPSK 2413
L++ D + + + + QE LM L+ QAPNYPYP LV ++EI + +G + LSKLRG+ ++TLHFLCPVDM KVPCG +G+GYRF R V KL+P LQV M AKVA++A GLDVD+SDFLKD DGLV+E+VD LDED L VV+G++ TDM++ RASYEA+ LM KL+R + + DGY+DFRE MQ + DGRGG VWVR ENV+KW DS S AAPS+
Sbjct: 998 LKDGFDDLKGRLSKVLDSTQESLMRLQTLQAPNYPYPRLVAIEEIASGGTLTRARGMKRVLSKLRGVGTKEMTLHFLCPVDMTKVPCGYDGDGYRFRETRRWVKKLSPVLQVAMVTAKVAIKATSGLDVDLSDFLKDVNDGLVDELVDRMLDEDELRRVVSGEEDVGTDMQKQTRASYEALTELMG-KLERRKDARDGDGYVDFRENMQRLSDGRGGEVWVRNENVQKWLDSHSSAAPSR 1236
BLAST of mRNA_E-fasciculatus_F_contig1396.2900.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 244 bits (623), Expect = 7.320e-62 Identity = 131/234 (55.98%), Postives = 163/234 (69.66%), Query Frame = 2
Query: 1745 IVATMDGMKEGIQERLMSLERFQAPNYPYPHLVMVQEI-------KTQGKRSPLSKLRGL---KLTLHFLCPVDMGKVPCGMNGEGYRFSARRSSVMKLAPALQVVMANAKVALRAALGLDVDISDFLKDFKDGLVEEIVDPALDEDVLLSVVNGDQGASTDMKRAIRASYEAMKNLME-EKLDRGMNTKGRDGYIDFREKMQPVGDGRGGMVWVRTENVRKWRDSLSLAAPSK 2413
I +D + E QE LM L QAPNY YP LV+V+E+ K +G++S LSKL G+ +TL FLCPVDM +VPCG GEGYRF RS V K++P LQV + AKVAL A GL VDISDFLKD KDGLVEE+VD LD++ LL V GD D++R RASYEA+K M+ E+++R NT+ DGYIDFR++M+ V DGRGGMVWVR ENV+KW DS S+AAP++
Sbjct: 1079 ISGRLDKVLESTQESLMRLRDLQAPNYRYPRLVVVKEVGSDGTASKARGRKSMLSKLCGVGKKDMTLQFLCPVDMTQVPCGYGGEGYRFKETRSWVKKISPVLQVAVVTAKVALNATTGLHVDISDFLKDVKDGLVEELVDRTLDDEALLRAVLGDDNIGADLQRDTRASYEALKKFMDKEQIERVKNTRDGDGYIDFRDEMKRVPDGRGGMVWVRNENVQKWLDSRSIAAPTR 1312
BLAST of mRNA_E-fasciculatus_F_contig1396.2900.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 241 bits (615), Expect = 7.650e-62 Identity = 127/225 (56.44%), Postives = 158/225 (70.22%), Query Frame = 2
Query: 1772 EGIQERLMSLERFQAPNYPYPHLVMVQEI-------KTQGKRSPLSKLRGL---KLTLHFLCPVDMGKVPCGMNGEGYRFSARRSSVMKLAPALQVVMANAKVALRAALGLDVDISDFLKDFKDGLVEEIVDPALDEDVLLSVVNGDQGASTDMKRAIRASYEAMKNLME-EKLDRGMNTKGRDGYIDFREKMQPVGDGRGGMVWVRTENVRKWRDSLSLAAPSK 2413
E +E LM + QAPNY YP LV+V+E+ K GK+S LSKLR L +TLHFLCPVDM KVPCG GEGYRF R V K++P LQV + AKVAL A GLDVDIS+FLKD KDGLV E+VD +DE+ LL V+GD +++R RASYEA+K M+ E++DR N + DGYIDFR++M+ V DGRGGMVWVR +NV+KW DS S+AAP++
Sbjct: 741 ESTKESLMRIRNLQAPNYRYPRLVVVKEVGADGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTIDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 965
BLAST of mRNA_E-fasciculatus_F_contig1396.2900.1 vs. uniprot
Match: A0A6H5JYD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD1_9PHAE) HSP 1 Score: 236 bits (601), Expect = 2.220e-61 Identity = 129/234 (55.13%), Postives = 159/234 (67.95%), Query Frame = 2
Query: 1745 IVATMDGMKEGIQERLMSLERFQAPNYPYPHLVMVQEI-------KTQGKRSPLSKLRGL---KLTLHFLCPVDMGKVPCGMNGEGYRFSARRSSVMKLAPALQVVMANAKVALRAALGLDVDISDFLKDFKDGLVEEIVDPALDEDVLLSVVNGDQGASTDMKRAIRASYEAMKNLME-EKLDRGMNTKGRDGYIDFREKMQPVGDGRGGMVWVRTENVRKWRDSLSLAAPSK 2413
I +D + E QE LM + QAPNY YP LV+V+E+ K GK+S LSKLR L +TLHFLCPVDM KVPCG GEGYRF R V K++P LQV + AKVAL A GLDVDIS+FLKD KDGLV E+VD LDE LL V+GD +++ RASYEA+K M+ E++DR N + DGYID R++M+ V DGRGGMVWVR +NV+KW DS S+AAP++
Sbjct: 508 ISGRLDKVLESTQESLMRIRHLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSLLSKLRLLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTLDE-ALLRAVSGDDDIGAELQTDTRASYEALKKFMDQEQVDRVKNARDGDGYIDLRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 740
BLAST of mRNA_E-fasciculatus_F_contig1396.2900.1 vs. uniprot
Match: A0A6H5KSY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY4_9PHAE) HSP 1 Score: 226 bits (576), Expect = 4.980e-60 Identity = 126/235 (53.62%), Postives = 155/235 (65.96%), Query Frame = 2
Query: 1745 IVATMDGMKEGIQERLMSLERFQAPNYPYPHLVMVQEIKTQGKRSPLS--------KLRGL---KLTLHFLCPVDMGKVPCGMNGEGYRFSARRSSVMKLAPALQVVMANAKVALRAALGLDVDISDFLKDFKDGLVEEIVDPALDEDVLLSVVNGDQGASTDMKRAIRASYEAMKNLME-EKLDRGMNTKGRDGYIDFREKMQPVGDGRGGMVWVRTENVRKWRDSLSLAAPSK 2413
+ ++D + E QE LM L+ QA NY YP LV+V+E G+ S + K RG+ + LHFLCPVDM KVPCG GEGYRF R V K++P LQV + AKVAL A GL+VDISDFLKD KDGLVEE+VD LDED LL V G+ DM+R RASYEA+K ME E+ R N + DGYIDFRE+M+ V +GRGGMVWVR +NV+KW +S S AAP++
Sbjct: 287 MQGSLDKVLESSQESLMRLKDLQALNYRYPRLVIVKEAGICGRSSKATGWKRFLPNKFRGVGKKDMALHFLCPVDMTKVPCGYGGEGYRFQETRDWVKKISPVLQVAVVTAKVALNATTGLNVDISDFLKDVKDGLVEELVDRTLDEDALLRAVLGEDSIGADMQRDTRASYEALKVFMENEERRRRKNARDGDGYIDFREEMKRVTNGRGGMVWVRNDNVQKWLESRSTAAPTR 521 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1396.2900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1396.2900.1 >prot_E-fasciculatus_F_contig1396.2900.1 ID=prot_E-fasciculatus_F_contig1396.2900.1|Name=mRNA_E-fasciculatus_F_contig1396.2900.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=751bp MADLLLSQAFSAGKKVLHMVETAKDCIDEGKELAGRVHSTLELMREAVPTback to top mRNA from alignment at E-fasciculatus_F_contig1396:2028..10874+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1396.2900.1 ID=mRNA_E-fasciculatus_F_contig1396.2900.1|Name=mRNA_E-fasciculatus_F_contig1396.2900.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8847bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1396:2028..10874+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1396:2028..10874+ >mRNA_E-fasciculatus_F_contig1396.2900.1 ID=mRNA_E-fasciculatus_F_contig1396.2900.1|Name=mRNA_E-fasciculatus_F_contig1396.2900.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4506bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1396:2028..10874+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |