prot_E-fasciculatus_F_contig1395.2894.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1395.2894.1
Unique Nameprot_E-fasciculatus_F_contig1395.2894.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length496
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1395.2894.1 vs. uniprot
Match: D7FUM2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUM2_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 1.880e-34
Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 0 
Query:  298 MGGGTGPYRNDSAFETVEVLRPGADTWVAGPSMCQARCGMGVTAMPDGKVFAVGGYGGDLVYRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEERFGAGDRGRAVTDASLVFQP 495
            MGGGTGPYRNDSAFETVEVLRPGADTWVAGPSMCQARCGMGVTA+PDGKVFAVGGYGGDLVYRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEERFGAGD GRAVTDASLVFQP
Sbjct:    1 MGGGTGPYRNDSAFETVEVLRPGADTWVAGPSMCQARCGMGVTALPDGKVFAVGGYGGDLVYRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEERFGAGDGGRAVTDASLVFQP 198
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BLAST of mRNA_E-fasciculatus_F_contig1395.2894.1 vs. uniprot
Match: A0A6H5K7M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M0_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 4.000e-21
Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 0 
Query:   25 RDRRGDRVAGAARSLQRRREGCRADRGRDGAE---SLLPFPPEVMSLALLYAGGKTLSQAACVSK 86
            RDRRGD +AGAARSL RRR+GCR   GRDGAE   SLLPFPPEVMSLALLYA GKTLSQAACVSK
Sbjct:   20 RDRRGDSIAGAARSLLRRRQGCRVVGGRDGAEAELSLLPFPPEVMSLALLYAEGKTLSQAACVSK 84
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1395.2894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUM2_ECTSI1.880e-3498.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K7M0_9PHAE4.000e-2183.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 346..393
e-value: 4.8E-8
score: 42.7
coord: 294..344
e-value: 2.9E-6
score: 36.8
coord: 444..489
e-value: 3.5
score: 6.9
coord: 395..442
e-value: 6.0E-5
score: 32.4
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 334..379
e-value: 5.0E-8
score: 32.4
coord: 389..428
e-value: 1.4E-7
score: 31.0
coord: 442..473
e-value: 2.4E-5
score: 23.8
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 234..387
e-value: 1.2E-25
score: 92.1
coord: 388..480
e-value: 3.7E-20
score: 74.0
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 271..475
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 137..217
IPR037293Galactose oxidase, central domain superfamilyGENE3D2.130.10.80coord: 80..227
e-value: 4.5E-8
score: 34.7
NoneNo IPR availablePANTHERPTHR46260FAMILY NOT NAMEDcoord: 272..437
coord: 361..472
NoneNo IPR availablePANTHERPTHR46260:SF3coord: 272..437
coord: 361..472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1395contigE-fasciculatus_F_contig1395:3175..12033 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1395.2894.1mRNA_E-fasciculatus_F_contig1395.2894.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1395 2970..13301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1395.2894.1 ID=prot_E-fasciculatus_F_contig1395.2894.1|Name=mRNA_E-fasciculatus_F_contig1395.2894.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=496bp
MTDSGGAAAAAAQQHQASSNNSSSRDRRGDRVAGAARSLQRRREGCRADR
GRDGAESLLPFPPEVMSLALLYAGGKTLSQAACVSKAVHAVVTAEHWETA
AAESRWLQRPTPAPSSFASPGEATRYWRRWSKLSSGAAGSPPGRVVVVGG
NEISSVEGSDKTEAFVDAPYGKAITWEALPRMAMSRSAAGATVDRFGGVY
VLGGWNSGGALSSCERLTHPLVSAQHQRQRGEGLGVNVETPSRAAQAPAP
APAAAAAAAAAAAASGESDWGWEALPPLRRQRCFLGAAFEPSGALLAMGG
GTGPYRNDSAFETVEVLRPGADTWVAGPSMCQARCGMGVTAMPDGKVFAV
GGYGGDLVYRSSVEVLDPCAERWAEVAPMKRCRTGVAATAGPNGRLYAVG
GSSDGSHGLSSVETLDPREGKWSASPRMVFGRAFCCASFGASGCLYVVGG
TSLATGVMRTVEVFDPRSERWRVEERFGAGDRGRAVTDASLVFQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037293Gal_Oxidase_central_sf
IPR015915Kelch-typ_b-propeller
IPR006652Kelch_1