mRNA_E-fasciculatus_F_contig13889.2854.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13889.2854.1
Unique NamemRNA_E-fasciculatus_F_contig13889.2854.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13889.2854.1 vs. uniprot
Match: D7FYP6_ECTSI (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP6_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 3.790e-73
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 
Query:   73 MKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 408
            MKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE
Sbjct:    1 MKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 112
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BLAST of mRNA_E-fasciculatus_F_contig13889.2854.1 vs. uniprot
Match: D7FYP7_ECTSI (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP7_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.370e-63
Identity = 102/127 (80.31%), Postives = 110/127 (86.61%), Query Frame = 1 
Query:   28 ILHSSPGKSIGSSPDMKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 408
            + H  P     ++  +KNM+ Q  +FWAEQMQEM  LEIGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKT+IFDFLV VI+
Sbjct:    5 MQHGEPLSDEENAAYLKNMKEQQTKFWAEQMQEMNVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVDVIQ 131
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BLAST of mRNA_E-fasciculatus_F_contig13889.2854.1 vs. uniprot
Match: A0A7S2DIM4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DIM4_9STRA)

HSP 1 Score: 189 bits (480), Expect = 5.340e-59
Identity = 94/118 (79.66%), Postives = 103/118 (87.29%), Query Frame = 1 
Query:   55 IGSSPDMKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 408
            +G +  +  MQ  L  FW  QM+EM+ LEIGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSE+NKRRTLQKEDIQ AI+KT+IFDFLV VI+
Sbjct:   16 MGETAHLAQMQDMLQGFWQSQMKEMDVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEQNKRRTLQKEDIQTAIKKTEIFDFLVDVIQ 133
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BLAST of mRNA_E-fasciculatus_F_contig13889.2854.1 vs. uniprot
Match: K3WAN7_GLOUD (CBFD_NFYB_HMF domain-containing protein n=25 Tax=Oomycota TaxID=4762 RepID=K3WAN7_GLOUD)

HSP 1 Score: 186 bits (473), Expect = 7.280e-58
Identity = 94/108 (87.04%), Postives = 99/108 (91.67%), Query Frame = 1 
Query:   82 MQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVI 405
            M+ QL  FWA+Q+QEME LE+G+EQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR TDIFDFLV VI
Sbjct:   30 MEQQLKSFWAKQLQEMEQLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVI 137
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BLAST of mRNA_E-fasciculatus_F_contig13889.2854.1 vs. uniprot
Match: A0A7S2SRM6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRM6_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.960e-57
Identity = 93/116 (80.17%), Postives = 102/116 (87.93%), Query Frame = 1 
Query:   61 SSPDMKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 408
            S+  + +M+  L  FW  Q QEM+TL IGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSE+NKRRTLQKEDIQ AIR+T+IFDFLV VI+
Sbjct:   32 SAQHIAHMRQMLRNFWQTQQQEMDTLAIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEQNKRRTLQKEDIQTAIRRTEIFDFLVDVIQ 147
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BLAST of mRNA_E-fasciculatus_F_contig13889.2854.1 vs. uniprot
Match: A0A6V1P6K4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6K4_HETAK)

HSP 1 Score: 187 bits (474), Expect = 2.310e-57
Identity = 93/118 (78.81%), Postives = 105/118 (88.98%), Query Frame = 1 
Query:   55 IGSSPDMKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 408
            I S   +++MQ  LNRFW EQM+EME L+IGTEQDFKNHNDLPL RIKRIMK DEDVRMI+AEAP+LFAKA EMFILE+TLRSWCYSE+NKRRTLQKEDIQ +IRKT+IFDFLV VI+
Sbjct:   68 IDSPAYLQHMQGLLNRFWDEQMREMEALQIGTEQDFKNHNDLPLMRIKRIMKSDEDVRMIAAEAPILFAKATEMFILEITLRSWCYSERNKRRTLQKEDIQTSIRKTEIFDFLVDVIQ 185
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BLAST of mRNA_E-fasciculatus_F_contig13889.2854.1 vs. uniprot
Match: A0A067D1Y5_SAPPC (CBFD_NFYB_HMF domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D1Y5_SAPPC)

HSP 1 Score: 184 bits (467), Expect = 4.600e-57
Identity = 94/111 (84.68%), Postives = 99/111 (89.19%), Query Frame = 1 
Query:   73 MKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVI 405
            M  M++QL  FWA Q+ EME LE+G+EQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR TDIFDFLV VI
Sbjct:   19 MAQMEAQLKVFWAGQLAEMEKLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVI 129
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BLAST of mRNA_E-fasciculatus_F_contig13889.2854.1 vs. uniprot
Match: W4HC48_9STRA (CBFD_NFYB_HMF domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=W4HC48_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.860e-56
Identity = 93/111 (83.78%), Postives = 98/111 (88.29%), Query Frame = 1 
Query:   73 MKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVI 405
            +  M+ QL  FWA Q+ EME LE+G+EQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR TDIFDFLV VI
Sbjct:   19 LAQMEQQLKVFWAGQLAEMEKLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVI 129
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BLAST of mRNA_E-fasciculatus_F_contig13889.2854.1 vs. uniprot
Match: A0A812R7W0_SYMMI (NFYC2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R7W0_SYMMI)

HSP 1 Score: 180 bits (456), Expect = 2.620e-55
Identity = 90/117 (76.92%), Postives = 101/117 (86.32%), Query Frame = 1 
Query:   46 GKSIGSSPDMKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLV 396
            G  I  +   +++Q  L++FW EQ+ EM  LEIGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEK KRRTLQK+DI+AAI+ T+IFDFLV
Sbjct:   15 GPEITEAMHQEHLQKALHQFWMEQIAEMNALEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKMKRRTLQKDDIEAAIKNTEIFDFLV 131
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BLAST of mRNA_E-fasciculatus_F_contig13889.2854.1 vs. uniprot
Match: A0A836C8W6_9STRA (Histone-fold-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W6_9STRA)

HSP 1 Score: 179 bits (453), Expect = 5.620e-55
Identity = 91/112 (81.25%), Postives = 97/112 (86.61%), Query Frame = 1 
Query:   73 MKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 408
            + N+ + L +FW EQMQEME LEI TEQ FK HNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTL KEDIQ AI KTD+FDFLV VI+
Sbjct:   16 LANLHAGLAQFWGEQMQEMEVLEISTEQAFKVHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWAYSEKNKRRTLTKEDIQEAIEKTDVFDFLVEVIQ 127
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13889.2854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYP6_ECTSI3.790e-73100.00CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ec... [more]
D7FYP7_ECTSI1.370e-6380.31CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ec... [more]
A0A7S2DIM4_9STRA5.340e-5979.66Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
K3WAN7_GLOUD7.280e-5887.04CBFD_NFYB_HMF domain-containing protein n=25 Tax=O... [more]
A0A7S2SRM6_9STRA1.960e-5780.17Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V1P6K4_HETAK2.310e-5778.81Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A067D1Y5_SAPPC4.600e-5784.68CBFD_NFYB_HMF domain-containing protein n=3 Tax=Sa... [more]
W4HC48_9STRA1.860e-5683.78CBFD_NFYB_HMF domain-containing protein n=3 Tax=Sa... [more]
A0A812R7W0_SYMMI2.620e-5576.92NFYC2 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A836C8W6_9STRA5.620e-5581.25Histone-fold-containing protein n=1 Tax=Tribonema ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13889contigE-fasciculatus_F_contig13889:225..3475 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.5
Seed ortholog evalue6.3e-57
Seed eggNOG ortholog2880.D7FYP6
Preferred nameNFYC
KEGG koko:K08066,ko:K19681
KEGG Pathwayko04612,ko05152,map04612,map05152
GOsGO:0000003,GO:0000429,GO:0000436,GO:0000902,GO:0000904,GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001067,GO:0001077,GO:0001101,GO:0001228,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003712,GO:0003713,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006457,GO:0006725,GO:0006807,GO:0006928,GO:0006935,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007584,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009416,GO:0009605,GO:0009628,GO:0009648,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009738,GO:0009739,GO:0009740,GO:0009755,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010029,GO:0010033,GO:0010099,GO:0010228,GO:0010467,GO:0010468,GO:0010476,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016602,GO:0018130,GO:0019216,GO:0019218,GO:0019219,GO:0019222,GO:0019438,GO:0022008,GO:0022414,GO:0023052,GO:0030030,GO:0030154,GO:0030182,GO:0031175,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032870,GO:0032989,GO:0032990,GO:0032991,GO:0032993,GO:0033993,GO:0034641,GO:0034645,GO:0034654,GO:0040011,GO:0042221,GO:0042330,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043457,GO:0043467,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044798,GO:0045540,GO:0045893,GO:0045935,GO:0045944,GO:0045990,GO:0045991,GO:0046483,GO:0046890,GO:0048468,GO:0048518,GO:0048522,GO:0048571,GO:0048573,GO:0048574,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048608,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050810,GO:0050896,GO:0051094,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0061458,GO:0061564,GO:0062012,GO:0065007,GO:0070013,GO:0070887,GO:0071215,GO:0071229,GO:0071310,GO:0071370,GO:0071396,GO:0071495,GO:0071496,GO:0071704,GO:0071840,GO:0080090,GO:0090181,GO:0090304,GO:0090575,GO:0097159,GO:0097305,GO:0097306,GO:0097485,GO:0097659,GO:0106118,GO:0120036,GO:0120039,GO:0140110,GO:1900140,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901700,GO:1901701,GO:1902680,GO:1902930,GO:1903506,GO:1903508,GO:1990837,GO:2000026,GO:2000030,GO:2000112,GO:2000306,GO:2001141
EggNOG free text desc.protein heterodimerization activity
EggNOG OGsCOG5208@1,KOG1657@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHistone-like transcription factor, NF-YC subunit
Ec32 orthologEc-26_004240.1
Exons4
Model size532
Cds size339
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13889.2854.1prot_E-fasciculatus_F_contig13889.2854.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13889 297..3354 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927880.8933673-UTR-E-fasciculatus_F_contig13889:224..2961622927880.8933673-UTR-E-fasciculatus_F_contig13889:224..296Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13889 225..296 +
1695995735.6711805-UTR-E-fasciculatus_F_contig13889:224..2961695995735.6711805-UTR-E-fasciculatus_F_contig13889:224..296Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13889 225..296 +
1622927880.9738135-UTR-E-fasciculatus_F_contig13889:3354..34751622927880.9738135-UTR-E-fasciculatus_F_contig13889:3354..3475Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13889 3355..3475 +
1695995735.7324362-UTR-E-fasciculatus_F_contig13889:3354..34751695995735.7324362-UTR-E-fasciculatus_F_contig13889:3354..3475Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13889 3355..3475 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927880.9168844-CDS-E-fasciculatus_F_contig13889:296..3021622927880.9168844-CDS-E-fasciculatus_F_contig13889:296..302Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13889 297..302 +
1695995735.6919107-CDS-E-fasciculatus_F_contig13889:296..3021695995735.6919107-CDS-E-fasciculatus_F_contig13889:296..302Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13889 297..302 +
1622927880.9291391-CDS-E-fasciculatus_F_contig13889:1695..17431622927880.9291391-CDS-E-fasciculatus_F_contig13889:1695..1743Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13889 1696..1743 +
1695995735.7013407-CDS-E-fasciculatus_F_contig13889:1695..17431695995735.7013407-CDS-E-fasciculatus_F_contig13889:1695..1743Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13889 1696..1743 +
1622927880.9430435-CDS-E-fasciculatus_F_contig13889:2026..21991622927880.9430435-CDS-E-fasciculatus_F_contig13889:2026..2199Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13889 2027..2199 +
1695995735.712044-CDS-E-fasciculatus_F_contig13889:2026..21991695995735.712044-CDS-E-fasciculatus_F_contig13889:2026..2199Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13889 2027..2199 +
1622927880.960654-CDS-E-fasciculatus_F_contig13889:3242..33541622927880.960654-CDS-E-fasciculatus_F_contig13889:3242..3354Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13889 3243..3354 +
1695995735.7228703-CDS-E-fasciculatus_F_contig13889:3242..33541695995735.7228703-CDS-E-fasciculatus_F_contig13889:3242..3354Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13889 3243..3354 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13889.2854.1

>prot_E-fasciculatus_F_contig13889.2854.1 ID=prot_E-fasciculatus_F_contig13889.2854.1|Name=mRNA_E-fasciculatus_F_contig13889.2854.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=113bp
MKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDED
VRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRK
TDIFDFLVHVIE*
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mRNA from alignment at E-fasciculatus_F_contig13889:225..3475+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13889.2854.1 ID=mRNA_E-fasciculatus_F_contig13889.2854.1|Name=mRNA_E-fasciculatus_F_contig13889.2854.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3251bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13889:225..3475+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGTGCGTCCGAAAACACTGCACACCTGATACTTCATAGCAGCCCCGGCAA
GTCCATCGGCAGTTCCCCAGACATGAAGGTCAGTCCAGTGCTCCATATAT
GTGTAGTTGTAGCAGTTGCCCTGTTCAACGGCTGGTATGCGTGTGTGTGC
TACTGCCGTCTTGCTCATTCATGAAAGGGCGACTCGTTGTGGTGGCGCAG
CGCCACTGTCAGCTACAAGCCGACATTAGTTTCGGGGATAGTTCGTGAAG
TTTATTTCCAATTTCAAGAAAGCTTCCTTGCGCAGAAGCAGCAAGCAGAG
CGCAACAAGATGCAGCAGCTACGAGCACACGCCCACGTGTTTTTCGTCCA
TCAGACCATCTCCACACACCTTCACACCACATCGCTTCACCATCCTTATC
AACATGGTGAGATTTGTCCCGCGTCTCGCTCCTCTAACTCTTCGGCGAGA
GTCGTGCAGCAAGTATTCTGCAGCAGCAGCAGCAGTCCTTTCGGCAAGCG
GTTGTACTTGAAGCTGCCAGAGACTCACAGCAGTAGGGAGAGTGTAGACG
CTACTGCTGTACCCCCACAACAACAACGCTGTTCCTTCCCACACGCCACA
CGCCCTCCGTGCTTCATCCCCGGCGGTCGCCCGGAACGCCACTTTAGGCA
TGATGAAAACACGTCGAATTCACGAGCAGCAGGGAAGACCCGCAGGCACC
TTTGGAAAAAAGTGTTCCGCTGCTGCGGCTGGGGTCATCACACCGTCAAC
ACACTCATTCTAAAGTTCCTCCTATGTATGCAAATTGGTATAATGCAATT
TGTGTATGCAAAATGCTACTTGTAATTAGTGCCGAGAACGTCTGCCCCTG
AGTGTGGTGGCATGTTTTCAAGAATGTACACGGCGTGCGCATGTGTATGC
AGGTATCTACCCTGTGGGGTATGCATAGAACGCTTCCAATTGGAGTGCCT
CCTGTTGCCTGCATCTTGTAGTCCGTACAGCAGTAGAGAGGCACTCCCCC
TCTGGGGTACTCTGTCGCTTTCATCCAGTCAGCAGGTTGGCGATGGCGTT
CTATGTTCCGTAATCCATGAAAGTTCCTGAGATTGGAAGGATCTCCGGCA
GCGAGAGGGCCTGCCGAGAGAGAAGCAGCAGTGTCGAGGATCGATCGACG
CGTTTTCCTGTTGTTTTGTCCGTTGCGACTCCATGGCACGGGCGCTACTG
CTTGTAGCTTGTGCTTGTCTGAGGCACCTTTTTACCATGCCCTGCCGGCG
ATACGTACCCGGAGTTTGTCATGTGGGCCTTGCAGTAGTGTCGGATGACG
GAGGACTCTTGCTTCTGGCACGTCGTGGATGGCGGCGAAAACGAGCAACG
AACACATACTCAAATAGCCGCCAAAGAGGTGACCGGATGGCTGTAGTATA
TGTACACACATTCAACACTCCCCCCCCCTCCCGCTTTTCGTTCCCGACTT
GTTTGTTTTGTCCTCCCACAGAACATGCAGTCGCAGCTGAACAGATTTTG
GGCGGAGCAGATGCAGGAGGTGAGCGTGTGCAGTGAGGGAGACAGAGATG
TGTGCCGGGGTATCGTGTTGGATAGATGCGTGTACAATCCAGATGTTGTT
GATAATACCTCGAGAGCGTAGCATATATCGTTCAAGAGTAAACCGTTGAG
ATGCATGTGGTCGTTGGTTCCACAACAACAACCAACAAAAATATTGAAAA
CAAAAAACTGAAAAATCGAGGCGATTTATTTGGCCACGATATGCGCCAGA
ACCGACACCTACACCCGCTTCGCCCCTCCTCTGTTTTGGCCCGGGACTTC
AGATGGAAACGCTAGAGATCGGCACGGAGCAGGACTTCAAGAACCACAAC
GATCTGCCGCTGGCGCGCATCAAGCGGATCATGAAGTGCGACGAGGACGT
GAGGATGATCTCCGCCGAGGCGCCGGTGCTCTTCGCCAAGGCGTGCGAGA
TGTTCATCCTCGAGCTCACCCTTAGGTACGTTACACAGCATGGGACGCTT
GGTGTGGTCACCGAGCCTGAAGGCGTACTGCTGCGTCATCTTGTGCCGAA
AAGCGCGCGTATCTTACAACGCTCTCTCTTCGTTTCCTATGCTCACGATT
GAGTCAAGCATGGGTTTCGTACGTGCTATCGGGGTAATTCGAAGCTATTT
TTTGTATGTAGATGCCCTGTGCTCCGTCGGCGCAACACACCGCCGTGTGC
AGGTCTCACAACACGCCCAACACTAACCAGTAGTTGGGTGTACACACGCC
ACACCATGTAGTGACTCCTCTTGAGACTTGCGAAGTCCGATCTCTGCCGT
CAGTTTTTGTTTTCTACCGCGGCACGCATTAGTTTTTTTTATTATTTTTC
CAAATACAACACAACGAGTCCATCTCCGTCAGAGAAAAGAGTCAAAGTTT
TGTTGTTTTTATGTGTGTGTGTGTGTTTTTTTTTTTTTTTTTTTTGGAAA
ACCCAGCCCCGTTGGCCCCATCCATTCTCGTTCAGACCACAGCAGTACTC
AATGGACCACCATCGCGCCCAAGGTACCTCATCAACGAAAACACACGTAG
GTATCGAGAGCGCTGGGATTGCGAACGACATCCAGAAAAAAAGTGGTCAT
ACAATCCCTTGTAGATATAGACAACACCATCAATTTGTGTTCGTCATTGC
TAGTCTTGTGTTTCTCCCGTTGCCAGACATGTACGCAGTGGGTCGATCCC
TCGGTGACTTTCACAAGACTGGAACGTACGGCCCTTTTATTTCTTCCCTC
GCCCGCTCCATCAACCTGTTTCCTTCGATACGTGGTACTCTCTGGCTTCG
TTCGCCGCTCCTTCGCCGGTCGTCCCCGCTCGTTGGCCCCATGTCTTGGG
AGTTTTTTTTCGTTTTGTTTCGCCGCAGCTCACGGCCGCCTACAACTTGT
TTCATCCTTGCTTGTTTTGTGATTGAACTATGTTTTTCCGTTTTGTTTAT
CTGGTGGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCCGCCGTCGCC
GGCCGGTGCATGCGACAGGTCTTGGTGCTACTCGGAGAAGAACAAGAGGC
GGACACTGCAGAAGGAAGACATCCAGGCTGCCATCCGCAAGACCGACATC
TTCGACTTCCTTGTGCACGTCATCGAATAGGTAGAAGACAAGATCACACC
AACCAAGCCTTGGTGGTTTTTTTTACCGTCCGTTAGGCGCACGCACCAAG
CCCATGTTTTGTTCTGGCCGTTACTTTGGGTGTTCGTTTGTTTTTGTCGT
T
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13889:225..3475+

>mRNA_E-fasciculatus_F_contig13889.2854.1 ID=mRNA_E-fasciculatus_F_contig13889.2854.1|Name=mRNA_E-fasciculatus_F_contig13889.2854.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=678bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13889:225..3475+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAGATGAAGAACATGCAGTCGCAGCTGAACAGATTTTGGGCGGAGCA
GATGCAGGAGAACATGCAGTCGCAGCTGAACAGATTTTGGGCGGAGCAGA
TGCAGGAGATGGAAACGCTAGAGATCGGCACGGAGCAGGACTTCAAGAAC
CACAACGATCTGCCGCTGGCGCGCATCAAGCGGATCATGAAGTGCGACGA
GGACGTGAGGATGATCTCCGCCGAGGCGCCGGTGCTCTTCGCCAAGGCGT
GCGAGATGTTCATCCTCGAGCTCACCCTTAGATGGAAACGCTAGAGATCG
GCACGGAGCAGGACTTCAAGAACCACAACGATCTGCCGCTGGCGCGCATC
AAGCGGATCATGAAGTGCGACGAGGACGTGAGGATGATCTCCGCCGAGGC
GCCGGTGCTCTTCGCCAAGGCGTGCGAGATGTTCATCCTCGAGCTCACCC
TTAGGTCTTGGTGCTACTCGGAGAAGAACAAGAGGCGGACACTGCAGAAG
GAAGACATCCAGGCTGCCATCCGCAAGACCGACATCTTCGACTTCCTTGT
GCACGTCATCGAATAGGTCTTGGTGCTACTCGGAGAAGAACAAGAGGCGG
ACACTGCAGAAGGAAGACATCCAGGCTGCCATCCGCAAGACCGACATCTT
CGACTTCCTTGTGCACGTCATCGAATAG
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