mRNA_E-fasciculatus_F_contig1384.2829.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1384.2829.1 vs. uniprot
Match: A0A6H5L4J3_9PHAE (RED_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J3_9PHAE) HSP 1 Score: 843 bits (2178), Expect = 1.860e-298 Identity = 490/569 (86.12%), Postives = 495/569 (86.99%), Query Frame = 1
Query: 211 MSAAQLKQVSTGRDLGEMEELKKLILSEKARTKHSDGGXXXXXERRVDGGDVSDDXXGEGXTRXXXXXXXXXXXXXXXXXXKEKKQKGTWRRGKLIVASGDDDPNKYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQIEILXXXXXXXQNGDRRGGRAEVRARTLMGKTVLAVLRKLSLGQGGGGPDFRRVGYEFELDPESTQEIPTAVAHSLGDDGEEXXXXXXXRERHTNYLMEEDLLERVESAFTLFRQHGGKARRQRKRARDKAGGVGAKEEDAIVAAFAKTGGGDGEGGDTEDRDAAVLPPARRAKVSINIFEDVDDRYVPPGSAGSASQPPVGAAGAAKGYFSGLRAKNAGDSADNKADVLPTRAEMSATVKAAARAAAARVSGDKKASYGPGAGETGKSGGRDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDEDATNKKDAKPGPEGGGGAGARESGRRGGDGKHDKHPGYDKPKASFPFGVKRSELSGRKGGGGSKSSGSKHRVDNELNIIKKYMKGDK 1917
MSAAQLKQVS+GRDLGEMEELKKLILSEKARTKHSDGG ERRVDGGDVSDD GEG TR XXXXXXXXXXX KEKKQKGTWRRGKLIVASG +DPNKYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQIE+L ++GDRRGGRAEVRARTLMGKTVLAVLRKLSL QGGGGPDFRRVGYEFELDPESTQEIPTAVAHSLGDDGEEXXXXX RERHTNYLMEEDLLERVESAFTLFRQHGGKARRQRKRARDKAG DG GD EDRDAAVLPPARRAKVSINIFEDVDDRYVPPGSAGSASQPPVGAAGAAKGYFSGLRAKNAGDS DNKADVLPTRAEMSATVKAAARAAAARVSGDKK S GA ETGKSGGRDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDEDATNKKDAKPGPEG HDKHP YDKPKASFPFGVKRSELS RKGGGGSKSSGSKHRVDNELNIIKKYMKGDK
Sbjct: 1 MSAAQLKQVSSGRDLGEMEELKKLILSEKARTKHSDGGGGGAGERRVDGGDVSDDDEGEGDTRDRGGGXXXXXXXXXXXGAKEKKQKGTWRRGKLIVASGVNDPNKYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQIEVLEGDGGDDRSGDRRGGRAEVRARTLMGKTVLAVLRKLSLSQGGGGPDFRRVGYEFELDPESTQEIPTAVAHSLGDDGEEXXXXX--RERHTNYLMEEDLLERVESAFTLFRQHGGKARRQRKRARDKAGXXXXXXXXXXXXXXXXXXXXDGGAGDMEDRDAAVLPPARRAKVSINIFEDVDDRYVPPGSAGSASQPPVGAAGAAKGYFSGLRAKNAGDS-DNKADVLPTRAEMSATVKAAARAAAARVSGDKKTSSEAGARETGKSGGRDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDEDATNKKDAKPGPEGXXXXXXXXXXXXXXX-NHDKHPAYDKPKASFPFGVKRSELSVRKGGGGSKSSGSKHRVDNELNIIKKYMKGDK 565
BLAST of mRNA_E-fasciculatus_F_contig1384.2829.1 vs. uniprot
Match: D7FT17_ECTSI (RED_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT17_ECTSI) HSP 1 Score: 689 bits (1778), Expect = 5.910e-240 Identity = 387/438 (88.36%), Postives = 389/438 (88.81%), Query Frame = 1
Query: 604 MDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQIEILXXXXXXXQNGDRRGGRAEVRARTLMGKTVLAVLRKLSLGQGGGGPDFRRVGYEFELDPESTQEIPTAVAHSLGDDGEEXXXXXXXRERHTNYLMEEDLLERVESAFTLFRQHGGKARRQRKRARDKAGGVGAKEEDAIVAAFAKTGGGDGEGGDTEDRDAAVLPPARRAKVSINIFEDVDDRYVPPGSAGSASQPPVGAAGAAKGYFSGLRAKNAGDSADNKADVLPTRAEMSATVKAAARAAAARVSGDKKASYGPGAGETGKSGGRDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDEDATNKKDAKPGPEGGGGAGARESGRRGGDGKHDKHPGYDKPKASFPFGVKRSELSGRKGGGGSKSSGSKHRVDNELNIIKKYMKGDK 1917
MDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQIEIL +NGDRRGGRAEVRARTLMGKTVLAVLRKLSLGQGGGGPDFRRVGYEFELDPESTQEIPTAVAHSLGDDGEEXXXXXX RERHTNYLMEEDLLERVESAFTLFRQHGGKARRQRKRARDKAGGVG G GDTEDRDAAVLPPARRAKVSINIFED+DDRYVPPGSAGSASQPPVGAAGAAKGYFSGLRAKNAGDSADNKADVLPTRAEMSATVKAAARAAAARVSGDKKAS G GA ETGKSGGRDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDEDATNKKDAKPGPEG HDKHP YDKPKASFPFGVKRSELSGRKGGGGSKSSGSKHRVDNELNIIKKYMKGDK
Sbjct: 1 MDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQIEILEGDGGDDRNGDRRGGRAEVRARTLMGKTVLAVLRKLSLGQGGGGPDFRRVGYEFELDPESTQEIPTAVAHSLGDDGEEXXXXXX-RERHTNYLMEEDLLERVESAFTLFRQHGGKARRQRKRARDKAGGVGXXXXXXXXXXXXXXXXXXGGAGDTEDRDAAVLPPARRAKVSINIFEDIDDRYVPPGSAGSASQPPVGAAGAAKGYFSGLRAKNAGDSADNKADVLPTRAEMSATVKAAARAAAARVSGDKKASSGAGARETGKSGGRDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDEDATNKKDAKPGPEGXXXXXXXXXXXXXXX-NHDKHPAYDKPKASFPFGVKRSELSGRKGGGGSKSSGSKHRVDNELNIIKKYMKGDK 436
BLAST of mRNA_E-fasciculatus_F_contig1384.2829.1 vs. uniprot
Match: D7G504_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G504_ECTSI) HSP 1 Score: 113 bits (282), Expect = 5.390e-26 Identity = 74/91 (81.32%), Postives = 75/91 (82.42%), Query Frame = 1
Query: 211 MSAAQLKQVSTGRDLGEMEELKKLILSEKARTKHSDGGXXXXXERRVDGGDVSDDXXGEGXTRXXXXXXXXXXXXXXXXXXKEKKQKGTWR 483
MSAAQLKQVS+GRDLGEMEELKKLILSEKARTKHSDGG ERRVDGGDVSDD GEG TR XXXXXXXXXX KEKKQKGTWR
Sbjct: 1 MSAAQLKQVSSGRDLGEMEELKKLILSEKARTKHSDGGGGGAGERRVDGGDVSDDDEGEGDTRDRGGGXXXXXXXXXXAGAKEKKQKGTWR 91
BLAST of mRNA_E-fasciculatus_F_contig1384.2829.1 vs. uniprot
Match: A0A7S3XKR5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKR5_HETAK) HSP 1 Score: 110 bits (275), Expect = 2.740e-22 Identity = 77/211 (36.49%), Postives = 107/211 (50.71%), Query Frame = 1
Query: 529 YRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQIEILXXXXXXXQNGDRRGGR--------------------AEVRARTLMGKTVLAVLRKLSLGQGGGGPDFRRVGYEFELDPESTQEIPTAVAHSLGDDGEEXXXXXXXRERHTNYLMEEDLLERVESAFTLFRQHGGKARRQRKRAR 1101
YRDRA ERR+G NPDY D + +M MD E +KYLGGDV+HTHLV+GLDYALL K+R+E +QQ + L + +G A +R RT +G+ V + SL F ++ +EF+LDP S QE+PT V+ + D E +++ L + VE AF RQ +R+RK+ R
Sbjct: 114 YRDRAAERRQGYNPDYDDDIEKMVQMDVEKSKYLGGDVKHTHLVRGLDYALLNKVRQETLEQQQQQLEATLEAQKKSKVQGXXXXXXXXXXXXXXXXXLAAAVARMRTRTPLGRGVQLYFAQRSLR---APVQFGQLSFEFDLDPASAQEVPTTVSKAKADAEAEDDTLETA-------ALDDALAQAVEQAFVGIRQGLKAGKRRRKKGR 314
BLAST of mRNA_E-fasciculatus_F_contig1384.2829.1 vs. uniprot
Match: A0A4D9CVF8_9STRA (RED_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVF8_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 6.040e-17 Identity = 68/142 (47.89%), Postives = 88/142 (61.97%), Query Frame = 1
Query: 499 VASGDDDPNKYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQIEILXXXXXXXQNGD---------RRGGRAEVRARTLMGKTVLAVLRKLSLGQGGGGPDFRRVGYEFEL 897
VA G + YRDRA+ERRKG NPDY D++ ++ MDAETTKYLGGDV+HTHLVKGLDYALL ++R ++ + E XXXXXXX RR A ++RTL+GK++ A L G RR+ E++L
Sbjct: 140 VAGGASEEGGYRDRAEERRKGVNPDYEDEIARLVHMDAETTKYLGGDVKHTHLVKGLDYALLQRVRAGLKEGEGEXXXXXXXXXXXXXXXXXGGMERRRKSLAAAQSRTLLGKSLQAFLVDRLSGVVRPVEAIRRLALEYDL 281
BLAST of mRNA_E-fasciculatus_F_contig1384.2829.1 vs. uniprot
Match: A0A7S2W4J1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4J1_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.890e-16 Identity = 113/371 (30.46%), Postives = 164/371 (44.20%), Query Frame = 1
Query: 526 KYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREE----------ERQQQIEILXXXXXXXQNGDRRGGRAE-------------VRARTLMGKTVLAVL-RKLSLGQG-----GGGPD-------FRRVGYEFELDP---ESTQEIPTAVAHS--------LGDDGEEXXXXXXXRERHTNYLMEEDLLERVESAFTLFRQHGGKARRQRKRARDKAGGVGAKEEDAIVAAFAKTGGGDGEGGDTEDRDAAVLPPARRAKVSINIFE--------DVDDRYVPPGSAGSASQPPVGAAGAAKGYFSGLRAKNAGDSADNKAD---VLPTRAEMSATVKAAARAAAA 1464
KYRDRA+ERRK NPDY + ++ +D E +KYLGGDVEHTHLVKGLDYALL K+R+E + QQ + + G R A + RT MGK++ L R L L + G P F R+G+EF+L E E+PT V+ + +G D E+ H L++E L++RV A +R+ G +R +KR+R + G G G T+D A+ PA +A ++ F+ D ++ P G ++ AA GYFS LRA + D + + D T+ ++ A +K+ AAA
Sbjct: 71 KYRDRANERRKEINPDYKTDVQKLLEVDIEKSKYLGGDVEHTHLVKGLDYALLSKVRDEITTDKDDIGATKSQQTKKTARIPQGLKKGSSRTVSAAQVLPTHRSTELAAISTRTRMGKSLAFFLARSLELEKPPVKSKAGRPTKTATEEAFERLGFEFQLSSHPSEGPSELPTMVSRAKVNWGGTGIGRDAEDD---------HLLALVDEKLIQRVVKALN-YRRDG---KRSKKRSRPSSQLRG------------------GNTGTTKDEPASS--PADKAPTPLDDFDIFEGAGRYDAEEAIDPSGGDKRETREDS----AAPGYFSNLRAVSNMDLQEQEVDKDAAAETKPDLGAIMKSVKGLAAA 404
BLAST of mRNA_E-fasciculatus_F_contig1384.2829.1 vs. uniprot
Match: A0A812YWK0_SYMMI (SMU2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YWK0_SYMMI) HSP 1 Score: 88.2 bits (217), Expect = 7.250e-15 Identity = 59/154 (38.31%), Postives = 81/154 (52.60%), Query Frame = 1
Query: 529 YRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQIEILXXXXXXXQNGDRRGGR-AEVRARTLMGKTVLAVLR--KLSLGQGGG-------------GPDFRRVGYEFELDPESTQEIPTAVAHS 942
YRDRA ERR NPDY +L +A++D E TKYLGGD EHTHLVKGLDYALL K+R + + + ++ + G R + V A++ +G + A+L K S + GG R YEF+ +P E+PT + S
Sbjct: 73 YRDRAQERRNDANPDYDAQLEAVANLDVEQTKYLGGDEEHTHLVKGLDYALLRKVRNQTEKNEARDQDSPDQLLESLENIGTRLSRVAAQSQLGDGIKALLLSDKGSFVRAGGRYVKAQDIPRGVKNTALSRTAYEFDTNPLGEAELPTVLRRS 226
BLAST of mRNA_E-fasciculatus_F_contig1384.2829.1 vs. uniprot
Match: A0A7R9Z3L9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9Z3L9_9CHLO) HSP 1 Score: 77.0 bits (188), Expect = 1.150e-12 Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 511 DDDPNKYRDRADERRKGQNPDYADKLNQMAS----------MDAETTKYLGGDVEHTHLVKGLDYALLVKIR 696
+DD KYRDRA+ERR+G NPDYA NQ+A+ + E TKYLGGD+EHTHLVKGLD+ALL K R
Sbjct: 67 EDDGPKYRDRAEERRRGINPDYAS-ANQLAAALPGDVDMNALSVEETKYLGGDIEHTHLVKGLDFALLQKER 137
BLAST of mRNA_E-fasciculatus_F_contig1384.2829.1 vs. uniprot
Match: A0A662WVS5_9STRA (RED_N domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVS5_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 2.160e-12 Identity = 67/206 (32.52%), Postives = 104/206 (50.49%), Query Frame = 1
Query: 523 NKYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQ----QQIEILXXXXXXXQNGDRRGGRAEVRARTLMGKTVLAVLRKLSLGQGGG---GPDFR-------RVGYEFELDPESTQEIPTAVAHSLGDDGEEXXXXXXXRERHTNYLMEEDLLERVESAFTLFRQHGGKARRQRKRA 1098
N YRDRA ERRKG N D D ++ A +DAE +K+LGGD+EHTHLVKGLDYALL +++ E+++ + E L DR+ + ++ MG+ V + S G P + ++ Y F L P+ + P +V S D E + + +++E L+ RV + ++ GGK R++K+A
Sbjct: 75 NVYRDRAAERRKGGNGDMID-ADEFAHLDAEQSKFLGGDMEHTHLVKGLDYALLAQLKREKQKLLHATEAEKLRHQHGEASGTDRKPSEKRLTFKSRMGRLVYFHACQSSPASDAGYGHRPSVKSEQFLPGKMYYTFNLSPDEMESTPVSVQRSKEDCPEP--------DEVASGMVDEALIARV-TELMRSKKSGGKKLRKKKKA 270
BLAST of mRNA_E-fasciculatus_F_contig1384.2829.1 vs. uniprot
Match: A0A397GNT5_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GNT5_9GLOM) HSP 1 Score: 80.9 bits (198), Expect = 5.320e-12 Identity = 46/89 (51.69%), Postives = 57/89 (64.04%), Query Frame = 1
Query: 463 KQKGTWRRGKLIVASGDDDPNKYRDRADERRKGQNPDYADKLNQMASMDAET---------TKYLGGDVEHTHLVKGLDYALLVKIREE 702
K K + R KL + + NKYRDRA ERRKG NPDY + + ++++ET +KYLGGD EHTHLVKGLDYALL K+R E
Sbjct: 68 KLKKSTRFRKLETSDAETTDNKYRDRAAERRKGANPDYQETEQILKALNSETLEAKLIYEQSKYLGGDTEHTHLVKGLDYALLAKVRNE 156 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1384.2829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1384.2829.1 >prot_E-fasciculatus_F_contig1384.2829.1 ID=prot_E-fasciculatus_F_contig1384.2829.1|Name=mRNA_E-fasciculatus_F_contig1384.2829.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=570bp MSAAQLKQVSTGRDLGEMEELKKLILSEKARTKHSDGGGGGAGERRVDGGback to top mRNA from alignment at E-fasciculatus_F_contig1384:5400..11614+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1384.2829.1 ID=mRNA_E-fasciculatus_F_contig1384.2829.1|Name=mRNA_E-fasciculatus_F_contig1384.2829.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6215bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1384:5400..11614+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1384:5400..11614+ >mRNA_E-fasciculatus_F_contig1384.2829.1 ID=mRNA_E-fasciculatus_F_contig1384.2829.1|Name=mRNA_E-fasciculatus_F_contig1384.2829.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3420bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1384:5400..11614+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |