mRNA_E-fasciculatus_F_contig1382.2815.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1382.2815.1 vs. uniprot
Match: A0A6H5KNZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ3_9PHAE) HSP 1 Score: 519 bits (1337), Expect = 1.870e-168 Identity = 336/546 (61.54%), Postives = 365/546 (66.85%), Query Frame = 1
Query: 1 MDGSRPPPEALSTRGCHPAERFHACRLVASRVRDAGYAEPLSAHQLLYPGGEDTRRVLLDLLAMLPPDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTDASSPQSAVIENVPETDIQESVEQAVSETGTGGDESPPSDAGGDAGDGPIALAAAGETGDVSGGEDPGLPASPAGRQEPEGGGSAASDMVEGLASPSXXXXXXXXXXXXRSTSSAEEAGDVVGERGSTQASREGAGSDDNDHDE-VPVSHVSGQYGDDPECEESEEEDNVFAAEPPCEAATASVGAGVEEEEAEMTRDGASEGGSCEGGHGEEVPAETATRSTGDDDDVSAPEADFVDEDGVGDTAPVGSFDPSNESGEGEQESPVENPP-PPEVLDEPLHRDAGEPAGGSGDGDCANPDGVTGQGAVEPVAEPSEPAGEDXXXXXXXRSAGVPEAESVGDAEGGVGDVGDTEAAVVGLSPNGGKPGGADRTAEEQEQGGSSALLAGETLPPGEGGEVEVKGKGGP 1632
MDGSRPPPEALST GCHPAERFHACRLVASRVRDAGY+EPLSAHQLLYPGGEDTRR+LLDLLAMLPPDG GTDASSPQSAV ENVPETD QE E AVSE+G+G ++SPPSDAGGDAGDGP ALA AGETGD+ G EDP LPASP+GRQ P G GSAASD+ EGL SPS RST SAE+ G+ VGERG QASR+ DDN D+ PVSHVS + G++ E SEEEDNVF AEP CE ATASVG GVE EE MTRD ASEGGSC+G GE VPAE STG DDDVSAP A FV+ +G GDTAPVG DPS+E GEGE ES VENPP P E LDEPLH+ AGEPA SGDGDCA+P+G T QGA EPVA PS +GED RS GVP+AES GDAEGGV VGD EAA VGL+ NGGKPGGA AEE+ G SSA +GE LPP EG +VE GKGGP
Sbjct: 203 MDGSRPPPEALSTTGCHPAERFHACRLVASRVRDAGYSEPLSAHQLLYPGGEDTRRMLLDLLAMLPPDGAKSPPPELASGTGPPLLPEGGKERQQADDLLSSDVGGTAERGSADRYNDNMSPRSEGQEEEAARVCG--GTDASSPQSAVAENVPETDAQEKGEHAVSESGSGEEDSPPSDAGGDAGDGPTALAGAGETGDMDGSEDPALPASPSGRQNPRG-GSAASDIAEGLGSPSGSGKEALAKVSGRSTPSAEKGGNAVGERGGGQASRDXXXXDDNGGDDGAPVSHVSDELGNETE---SEEEDNVFTAEPSCEDATASVGTGVEAEEEGMTRDEASEGGSCKGDEGEGVPAEMTAPSTGGDDDVSAPGAGFVNGNGSGDTAPVGIVDPSDEPGEGEPESLVENPPLPSEALDEPLHQGAGEPARESGDGDCADPNGATAQGAAEPVAGPSGASGEDE------RSPGVPQAESEGDAEGGVCAVGDEEAAAVGLTANGGKPGGAVDAAEER--GDSSASPSGEALPPEEGADVEG-GKGGP 733
BLAST of mRNA_E-fasciculatus_F_contig1382.2815.1 vs. uniprot
Match: D7FJ88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ88_ECTSI) HSP 1 Score: 478 bits (1230), Expect = 6.840e-155 Identity = 320/509 (62.87%), Postives = 341/509 (66.99%), Query Frame = 1
Query: 103 AGYAEPLSAHQLLYPGGEDTRRVLLDLLAMLPPDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTDASSPQSAVIENVPETDIQESVEQAVSETGTGGDESPPSDAGGDAGDGPIALAAAGETGDVSGGEDPGLPASPAGRQEPEGGGSAASDMVEGLASPSXXXXXXXXXXXXRSTSSAEEAGDVVGERGSTQASREGAGSDDNDHDEVPVSHVSGQYGDDPECEESEEEDNVFAAEPPCEAATASVGAGVEEEEAEMTRDGASEGGSCEGGHGEEVPAETATRSTGDDDDVSAPEADFVDEDGVGDTAPVGSFDPSNESGEGEQESPVENPPPP-EVLDEPLHRDAGEPAGGSGDGDCANPDGVTGQGAVEPVAEPSEPAGEDXXXXXXXRSAGVPEAESVGDAEGGVGDVGDTEAAVVGLSPNGGKPGGADRTAEEQEQGGSSALLAGETLPPGEGGEVEVKGKG 1626
AGYAEPLSAHQLLYPGGEDTRR+LLDLL MLPPDG XXXXXXX GTDASS QSAV ENVPETD QE VEQAVSE+G GG E+PPSDAGGDAGD P ALA AGETGDV G EDP LPA P+GRQEP GGSAASD+VEG SPS RST SAEE GD +GERGS QASR+G S+D+D D PV HVS +YGDD E S+EEDNVFAAEP CE ATASVG GVE EE MTR ASEGGSC G GE VPAET STG DDDVSAPEA F DE+G DTAPVGS DPS+ GEGE ESPV NPPPP E DEPLH++AGEPAGGSGDGDCA+PDG TG GA EPVA PSE AGED R GVPE E+ GDA GGV VGD EAA VGLS NGGKPGG D +++GGSSALL GE LPP EGG+VE GKG
Sbjct: 17 AGYAEPLSAHQLLYPGGEDTRRMLLDLLTMLPPDGAKSPPPELAPGTXXXXXXXEGKERQQADDLLSSDVGGTAERGSADKDKDNASPRSEGQEEEAERVVG--GTDASSRQSAVAENVPETDAQERVEQAVSESGPGGVETPPSDAGGDAGDRPTALAEAGETGDVDGMEDPALPAPPSGRQEPGEGGSAASDIVEGKGSPSGSGKEALAEVSGRSTPSAEEDGDAIGERGSGQASRDGRYSNDDDDDGAPVRHVSDEYGDDTE---SDEEDNVFAAEPSCEDATASVGTGVEAEEEGMTRGEASEGGSCTGDEGEGVPAETTAPSTGGDDDVSAPEAGFGDENGDEDTAPVGSVDPSDGPGEGEPESPVGNPPPPSEAPDEPLHQEAGEPAGGSGDGDCADPDGATGHGAAEPVAGPSEAAGEDE------RRPGVPEPENEGDAVGGVSGVGDEEAATVGLSANGGKPGGVDAA---EDRGGSSALLEGEALPPEEGGDVEG-GKG 510 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1382.2815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1382.2815.1 >prot_E-fasciculatus_F_contig1382.2815.1 ID=prot_E-fasciculatus_F_contig1382.2815.1|Name=mRNA_E-fasciculatus_F_contig1382.2815.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=555bp MDGSRPPPEALSTRGCHPAERFHACRLVASRVRDAGYAEPLSAHQLLYPGback to top mRNA from alignment at E-fasciculatus_F_contig1382:15833..18397+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1382.2815.1 ID=mRNA_E-fasciculatus_F_contig1382.2815.1|Name=mRNA_E-fasciculatus_F_contig1382.2815.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2565bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1382:15833..18397+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1382:15833..18397+ >mRNA_E-fasciculatus_F_contig1382.2815.1 ID=mRNA_E-fasciculatus_F_contig1382.2815.1|Name=mRNA_E-fasciculatus_F_contig1382.2815.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3330bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1382:15833..18397+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |