prot_E-fasciculatus_F_contig13795.2795.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13795.2795.1
Unique Nameprot_E-fasciculatus_F_contig13795.2795.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length226
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13795.2795.1 vs. uniprot
Match: D7FKJ9_ECTSI (PIH1_CS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKJ9_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 3.700e-85
Identity = 146/187 (78.07%), Postives = 150/187 (80.21%), Query Frame = 0 
Query:    2 TSQRAAGKEIKSKTNRPATSAGADDNGAAPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPVEQLSPGVRRGSGGTTYKLVESGAFEISDHTTDRVRQTPTPRTLVATVTLPADAEPTRKLDVVVALRRLTIGVLGDPEGSSPRYLDLPLPYDVEDDSKCSAARDKSGLLKITMPVKQPAAPPLTV 188
            TSQR AGKEIKSK NRP TSA ADDNGAA RS                           STP EQL+PG+RRGSGG TYKLVESGAFEISDHTTDRVRQTPTPRTLV TVTLPADA PTRKLDVVVA+RRLTIGVL DPEGSSPRYLDLPLPYDVED+SKCSAARDKSGLLKITMPVKQPAAPPLTV
Sbjct:   32 TSQRDAGKEIKSKANRPQTSAVADDNGAALRSAGAAAEPKKAGDGESPSPASAPAEKEQSTPAEQLAPGLRRGSGGATYKLVESGAFEISDHTTDRVRQTPTPRTLVVTVTLPADAGPTRKLDVVVAVRRLTIGVLSDPEGSSPRYLDLPLPYDVEDESKCSAARDKSGLLKITMPVKQPAAPPLTV 218
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13795.2795.1 vs. uniprot
Match: A0A6H5JI76_9PHAE (PIH1_CS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI76_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 3.230e-76
Identity = 152/223 (68.16%), Postives = 161/223 (72.20%), Query Frame = 0 
Query:    1 QTSQRAAGKEIKSKTNRPATSAGADDNGAAPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPVEQLSPGVRRGSGGTTYKLVESGAFEISDHTTDRVRQTPTPRTLVATVTLPADAEPTRKLDVVVALRRLTIGVLGDPEGSSPRYLDLPLPYDVEDDSKCSAARDKSGLLKITMPVKQPAAPPLTVXXXXXXXXXXXXXXXXXXXXXXXXXDGDGDSEEHE 223
            +T+Q+AAGK   +K NRP TSA AD N AAPRS             XXXXXX        STP EQL+PG++RG GGTTYKLVESGAFEISDHTTDRVRQTPTPRTLV TV LPADAE TRKLDVVVALR+LTIGVLGDPEGSSPRYLDLPLPYDVEDDSKCSA RDKSGLLKITMPVKQPAAPPLTV                         D DG SEEH+
Sbjct:    3 ETAQKAAGK---AKANRPRTSAVADVNVAAPRSAGAAAEPKKAGDGXXXXXXSAPAEKEQSTPAEQLAPGLKRGFGGTTYKLVESGAFEISDHTTDRVRQTPTPRTLVVTVILPADAESTRKLDVVVALRKLTIGVLGDPEGSSPRYLDLPLPYDVEDDSKCSAVRDKSGLLKITMPVKQPAAPPLTVPPPLPAAATARVCSDGGRGGAAAATDIDGVSEEHK 222
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13795.2795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKJ9_ECTSI3.700e-8578.07PIH1_CS domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JI76_9PHAE3.230e-7668.16PIH1_CS domain-containing protein n=1 Tax=Ectocarp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041442PIH1D1/2/3, CS-like domainPFAMPF18201PIH1_CScoord: 79..179
e-value: 1.3E-7
score: 32.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13795contigE-fasciculatus_F_contig13795:1794..3521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13795.2795.1mRNA_E-fasciculatus_F_contig13795.2795.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13795 1794..3521 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13795.2795.1 ID=prot_E-fasciculatus_F_contig13795.2795.1|Name=mRNA_E-fasciculatus_F_contig13795.2795.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=226bp
QTSQRAAGKEIKSKTNRPATSAGADDNGAAPRSAAAAEPEKAGDGEPPSA
ASAPAAAEEESTPVEQLSPGVRRGSGGTTYKLVESGAFEISDHTTDRVRQ
TPTPRTLVATVTLPADAEPTRKLDVVVALRRLTIGVLGDPEGSSPRYLDL
PLPYDVEDDSKCSAARDKSGLLKITMPVKQPAAPPLTVPPPPPAAAAAEV
CNDGGGGGAAAAADGDGDSEEHEVI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041442PIH1D1/2/3_CS-like