prot_E-fasciculatus_F_contig1373.2759.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1373.2759.1
Unique Nameprot_E-fasciculatus_F_contig1373.2759.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length37
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1373.2759.1 vs. uniprot
Match: D7FKL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL5_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 5.250e-13
Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 0 
Query:    1 LPFLFSLKLFPRNAVGGARWPGDFEEQGTYSVEVRGV 37
            L F   ++LFPRNAVGGA WPGDFEEQGTYSVEVRGV
Sbjct:  101 LKFPVMMQLFPRNAVGGASWPGDFEEQGTYSVEVRGV 137
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1373.2759.1 vs. uniprot
Match: A0A6H5KIW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIW6_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.180e-11
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0 
Query:    1 LPFLFSLKLFPRNAVGGARWPGDFEEQGTYSVEVRGV 37
            L F   ++LFPRNAVGGA WPGDFEEQGTYSVEVR V
Sbjct:  160 LKFPVMMQLFPRNAVGGASWPGDFEEQGTYSVEVRSV 196
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1373.2759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKL5_ECTSI5.250e-1381.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIW6_9PHAE1.180e-1178.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1373contigE-fasciculatus_F_contig1373:18289..18399 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1373.2759.1mRNA_E-fasciculatus_F_contig1373.2759.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1373 18289..18399 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1373.2759.1 ID=prot_E-fasciculatus_F_contig1373.2759.1|Name=mRNA_E-fasciculatus_F_contig1373.2759.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=37bp
LPFLFSLKLFPRNAVGGARWPGDFEEQGTYSVEVRGV
back to top