mRNA_E-fasciculatus_F_contig1371.2743.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1371.2743.1 vs. uniprot
Match: A0A6H5LQ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ53_9PHAE) HSP 1 Score: 1132 bits (2929), Expect = 0.000e+0 Identity = 643/939 (68.48%), Postives = 712/939 (75.83%), Query Frame = 1
Query: 1 MNWMTSGRKRVQRSQKVKELRAKHFARVAADRARAPVSRPARASSSTLNQVQSADVSRLKSRWTQQLPSADKGSTLQRTAAGSVGADHTTAANSNSPPPTVSTLGPGTTPDFQPGTLDLEVTPPFNATAGQQHGSNGVARIPGAAVPAD---------HNFERPLRHHPLQQQPTGTFRGGGFLLRAEPDDRPPRHALLPLERRQLVFGGAGGEPEHQDFRSSYEEQLIGSECVDIGDGVSNPSGPPVEEEVRYQRGQALPGDSSADAAXXXXXXXDSDCANVDRTRTPRVMDQWGRAGHPAAENTMRFFNDGFAVAQDGSPVVDGPLAATPPGTTIATSSAGVAAFPVNDHETNHNTTCNQFGVRESGNSGGLPRFSIDGVLRGGNRSSPPTTPAGLWKQNIPSEYRSNHQYALESRSVSDCGPGFSGQALAKEQVQPRGH-LEDGAEVHHRSQGEHNADLEQGRMLDHEEMMNSLPRDAAPPAFDMLARTWGLFGGALDATTPTAFVASSSNNAKGRKTSEERAMRDTSFRHGEDGKTGAPPLHASVPVRATTHALGRQGDLSPEPNHADAEHPEASESQQSPPPPLTPTSAQDYDRGCEDGGGSPELMMQFFQGPELEEVVVTGGETGAEALEGEHQNNSQPTQDGIPVTVGDAQHTPKQHKASTETLVSPRPADPKIGDNQEEGEQQPRQADLNNLQASKGPKSVAAADDRDVAPIPANGGDAPSEAQHDTMRRLEGGPPKPQIRTVKDNEPGGSGGGGDXXXSVGEKGGNINTVSQDVMPPGDVQLRPGRRSTPNGSQSSAGHEAAPAMPSSSPHKSAAVPSAEVSSSSHGQDRKRARDAGDEEKGQAQRQDHQFKPGSKLPVRNGGDLGVRAARLSGKAGRLQLEVMKASKCGSGAREGGFGDRNARQGRMERDAGSTIVWYQTIVACLTATS 2787
MNWMTSGRKRVQRSQKVKELRAKHFA+VAADRARAPVSRPARASSSTLNQ SADVSRLKSRW Q LPS K LQRT AGS A+HTTA +S SPP V+TLG GTTPDFQPGTLDLEVTPPFNAT QQ GS+G+ARIPGAA+P D ++FERPLRHHP QQ+PT +FRGGG LLRA+P+DRPPRH LLPLERRQLVF G GG E Q F +SYEEQ IGSEC IGDG SN SGP VEE+ RY RG+ALPGD S A DSD N D RTPRVM Q GRA P E+TMRFFNDGFAVAQDGSPVVDGP AT T +A SS G FP NDH+ N +T QFGVRESG++GGLPRFSI G LR GN SSP TPAGLWK+N+ S+YRSN Q AL S SDCGP FS QA A+EQ+QP GH ED +EVHH SQGE++ D EQG MLD EE+MN PRDAAPPAFD+LARTWGLFGGALDATTPTAF AS SN+AKGR TSEERAMR+ SFRHG DG+ GA PL ASVPVRAT A+ Q D SPEP ADAEHP+A ES QSPP P TPTSA+DYDRGCEDGGGSPELMMQF Q EL+ VVVTGG+T A ALEGEH+N+ +PT+D IP T GDAQ+TP+QH+AS ETLVSP+PA PK+G +QEE EQQPRQADLN +AS+GP+SVAA D+RDVAPIPAN GDAP+E QHDT+RRL+G PPKPQIRTV DNEPGGSG GG SVG+ GG+I TVSQDVMPP EV+SS GQDRKRAR+AG+ ++HQ + GSKLP+RNGG G RA +LSGKA RLQLEVMKAS CGSG REG G+ NARQGRMERDAGSTIVWYQTIVACLT+TS
Sbjct: 1 MNWMTSGRKRVQRSQKVKELRAKHFAKVAADRARAPVSRPARASSSTLNQ--SADVSRLKSRWIQPLPSTHKVPALQRTVAGSAAAEHTTAEDSASPPSNVTTLGSGTTPDFQPGTLDLEVTPPFNATIRQQQGSDGMARIPGAALPTDGPRRGSSGDNDFERPLRHHPRQQRPTASFRGGGLLLRAQPEDRPPRHTLLPLERRQLVFDGGGGTAEKQGFGNSYEEQPIGSECAGIGDGASNSSGPRVEED-RYPRGRALPGDISTRTAGAAA---DSDGTNADHNRTPRVMGQLGRASDPVVEHTMRFFNDGFAVAQDGSPVVDGPFTATSSATAVAASSVGGLVFPTNDHDNNRDTDGTQFGVRESGSTGGLPRFSIAGGLRDGNCSSPLATPAGLWKENMLSDYRSNRQCALARSSASDCGPDFSVQAPAEEQIQPGGHHCEDASEVHHHSQGEYDTDFEQGPMLDDEELMNPPPRDAAPPAFDVLARTWGLFGGALDATTPTAFEASGSNSAKGRDTSEERAMREASFRHGRDGEKGALPLQASVPVRATLQAVVGQEDQSPEPIDADAEHPDAIESLQSPPSPSTPTSARDYDRGCEDGGGSPELMMQFLQELELD-VVVTGGQTDAGALEGEHKNSCRPTEDDIPATTGDAQNTPEQHEASKETLVSPQPAGPKVGHDQEESEQQPRQADLNTFKASQGPESVAA-DERDVAPIPANVGDAPTEVQHDTIRRLQGRPPKPQIRTVNDNEPGGSGEGG---RSVGKDGGSIKTVSQDVMPP------------------------------------------EVASSD-GQDRKRAREAGEGA------ENHQSEAGSKLPLRNGGG-GFRATKLSGKAQRLQLEVMKASTCGSGEREGEVGNGNARQGRMERDAGSTIVWYQTIVACLTSTS 878 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1371.2743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1371.2743.1 >prot_E-fasciculatus_F_contig1371.2743.1 ID=prot_E-fasciculatus_F_contig1371.2743.1|Name=mRNA_E-fasciculatus_F_contig1371.2743.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=930bp MNWMTSGRKRVQRSQKVKELRAKHFARVAADRARAPVSRPARASSSTLNQback to top mRNA from alignment at E-fasciculatus_F_contig1371:1991..7321- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1371.2743.1 ID=mRNA_E-fasciculatus_F_contig1371.2743.1|Name=mRNA_E-fasciculatus_F_contig1371.2743.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5331bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1371:1991..7321- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1371:1991..7321- >mRNA_E-fasciculatus_F_contig1371.2743.1 ID=mRNA_E-fasciculatus_F_contig1371.2743.1|Name=mRNA_E-fasciculatus_F_contig1371.2743.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=5580bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1371:1991..7321- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |